RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 MYOM2P54296 1465 aa10.88□□□□□ -0.67
SMARCA1-202ENST00000371122 IDH1O75874 414 aaKnown RBP10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 GPTP24298 496 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 BLOC1S2Q6QNY1 142 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 TNRQ92752 1358 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 ME1P48163 572 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 PIP4K2BP78356 416 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 FILIP1Q7Z7B0 1213 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 LRRC2Q9BYS8 371 aa10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 TMX4Q9H1E5 349 aaPredicted RBP10.87□□□□□ -0.67
SMARCA1-202ENST00000371122 PDRG1Q9NUG6 133 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 ESPNB1AK53 854 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 PPP1R42Q7Z4L9 355 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 NUP133Q8WUM0 1156 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 TSPY26PQ9H489 355 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 SCAF11Q99590 1463 aaKnown RBP10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 PHF8Q9UPP1 1060 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 DIP2AQ14689 1571 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 LAMC1P11047 1609 aa10.86□□□□□ -0.67
SMARCA1-202ENST00000371122 CT47B1P0C2W7 299 aaPredicted RBP10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 TBC1D32Q96NH3 1257 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 ABCF2Q9UG63 623 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 PA2G4Q9UQ80 394 aaKnown RBP10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 SLC4A8Q2Y0W8 1093 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 CFAP65Q6ZU64 1925 aaKnown RBP10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 CKAP2LQ8IYA6 745 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 PARD3Q8TEW0 1356 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 SMC2O95347 1197 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 ADAMTS2O95450 1211 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 SDSP20132 328 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 PSMA5P28066 241 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 NECAB1Q8N987 351 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 CCDC34Q96HJ3 373 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 NINLQ9Y2I6 1382 aa10.85□□□□□ -0.67
SMARCA1-202ENST00000371122 CCT2P78371 535 aaKnown RBP10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 CCDC57Q2TAC2 916 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 TTC39AQ5SRH9 613 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 NOC3LQ8WTT2 800 aaKnown RBP10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 KNDC1Q76NI1 1749 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 ERICH2A1L162 156 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 HAND2P61296 217 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 STK38Q15208 465 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 G2E3Q7L622 706 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 UBE3BQ7Z3V4 1068 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 KINO60870 393 aaKnown RBP10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 TPM3P06753 285 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 ZBTB9Q96C00 473 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 CEP126Q9P2H0 1117 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 NWD1Q149M9 1564 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 CPA1P15085 419 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 SKIDA1Q1XH10 827 aa10.84□□□□□ -0.67
SMARCA1-202ENST00000371122 IQGAP1P46940 1657 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 RAB11FIP3O75154 756 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 EIF4A2Q14240 407 aaKnown RBP10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 DNAAF4Q8WXU2 420 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 A0A087WZG4 1122 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 MBD3O95983 291 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 ATP2B2Q01814 1243 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 MAP3K2Q9Y2U5 619 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 LRRFIP1Q32MZ4 808 aaKnown RBP10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 CHPF2Q9P2E5 772 aa10.83□□□□□ -0.68
SMARCA1-202ENST00000371122 MTHFSDQ2M296 383 aaKnown RBP10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 ALDH1L2Q3SY69 923 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 ISM2Q6H9L7 571 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 KIF1BPQ96EK5 621 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 VAMP4O75379 141 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 ZGPATQ8N5A5 531 aaKnown RBP10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 TNMDQ9H2S6 317 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 SAFBQ15424 915 aaKnown RBP eCLIP10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 CCDC158Q5M9N0 1113 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 CCDC144CPQ8IYA2 1237 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 ZNF830Q96NB3 372 aaPredicted RBP10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 USP25Q9UHP3 1055 aa10.82□□□□□ -0.68
SMARCA1-202ENST00000371122 WDR33Q9C0J8 1336 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 UHRF1BP1Q6BDS2 1440 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 MPHOSPH8Q99549 860 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 PHAXQ9H814 394 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 IQSEC3Q9UPP2 1182 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 CWF19L2Q2TBE0 894 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 DDX46Q7L014 1031 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 UBE2Q2Q8WVN8 375 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 SPATA32Q96LK8 384 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 TRPM1Q7Z4N2 1603 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 KIF6Q6ZMV9 814 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 CHAMP1Q96JM3 812 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 TBC1D2BQ9UPU7 963 aa10.81□□□□□ -0.68
SMARCA1-202ENST00000371122 XRN1Q8IZH2 1706 aaKnown RBP10.8□□□□□ -0.68
SMARCA1-202ENST00000371122 KRT85P78386 507 aa10.8□□□□□ -0.68
SMARCA1-202ENST00000371122 HSP90AB3PQ58FF7 597 aa10.8□□□□□ -0.68
SMARCA1-202ENST00000371122 CHD2O14647 1828 aaKnown RBP10.8□□□□□ -0.68
SMARCA1-202ENST00000371122 BAG4O95429 457 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 MCM2P49736 904 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 BMP2KLQ5H9B9 411 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 MEX3CQ5U5Q3 659 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 ZNF771Q7L3S4 317 aaPredicted RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 GOLIM4O00461 696 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 NUCB1Q02818 461 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 ERC1Q8IUD2 1116 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 KLHDC4Q8TBB5 520 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms