RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 DBF4Q9UBU7 674 aaPredicted RBP15.83■□□□□ 0.13
GPC3-201ENST00000370818 SPG7Q9UQ90 795 aa15.83■□□□□ 0.13
GPC3-201ENST00000370818 PROSER3Q2NL68 480 aa15.82■□□□□ 0.12
GPC3-201ENST00000370818 BEND3Q5T5X7 828 aa15.82■□□□□ 0.12
GPC3-201ENST00000370818 TBC1D2Q9BYX2 928 aa15.82■□□□□ 0.12
GPC3-201ENST00000370818 SRCIN1Q9C0H9 1055 aa15.82■□□□□ 0.12
GPC3-201ENST00000370818 SLC52A2Q9HAB3 445 aa15.82■□□□□ 0.12
GPC3-201ENST00000370818 ADCY9O60503 1353 aa15.82■□□□□ 0.12
GPC3-201ENST00000370818 RBM25P49756 843 aaKnown RBP15.82■□□□□ 0.12
GPC3-201ENST00000370818 DNAAF4Q8WXU2 420 aa15.82■□□□□ 0.12
GPC3-201ENST00000370818 EXOC6BQ9Y2D4 811 aa15.82■□□□□ 0.12
GPC3-201ENST00000370818 PLEKHG2Q9H7P9 1386 aa15.82■□□□□ 0.12
GPC3-201ENST00000370818 CYP27B1O15528 508 aa15.82■□□□□ 0.12
GPC3-201ENST00000370818 UBTFL1P0CB47 393 aaPredicted RBP15.82■□□□□ 0.12
GPC3-201ENST00000370818 ZNF790Q6PG37 636 aa15.81■□□□□ 0.12
GPC3-201ENST00000370818 IFNL2Q8IZJ0 200 aa15.81■□□□□ 0.12
GPC3-201ENST00000370818 FSD2A1L4K1 749 aa15.81■□□□□ 0.12
GPC3-201ENST00000370818 CDC45O75419 566 aa15.81■□□□□ 0.12
GPC3-201ENST00000370818 SLC39A6Q13433 755 aa15.81■□□□□ 0.12
GPC3-201ENST00000370818 NFATC2IPQ8NCF5 419 aa15.81■□□□□ 0.12
GPC3-201ENST00000370818 SCN11AQ9UI33 1791 aa15.8■□□□□ 0.12
GPC3-201ENST00000370818 NBPF7P0C2Y1 421 aaPredicted RBP15.8■□□□□ 0.12
GPC3-201ENST00000370818 PRDM11Q9NQV5 511 aa15.79■□□□□ 0.12
GPC3-201ENST00000370818 IBTKQ9P2D0 1353 aaPredicted RBP15.79■□□□□ 0.12
GPC3-201ENST00000370818 GOLGA6L3A6NEY3 463 aa15.78■□□□□ 0.12
GPC3-201ENST00000370818 PDIA6Q15084 440 aa15.78■□□□□ 0.12
GPC3-201ENST00000370818 SSH3Q8TE77 659 aa15.78■□□□□ 0.12
GPC3-201ENST00000370818 DCAF5Q96JK2 942 aa15.78■□□□□ 0.12
GPC3-201ENST00000370818 PANK2Q9BZ23 570 aa15.78■□□□□ 0.12
GPC3-201ENST00000370818 OSBPL3Q9H4L5 887 aa15.78■□□□□ 0.12
GPC3-201ENST00000370818 MRC1P22897 1456 aa15.78■□□□□ 0.12
GPC3-201ENST00000370818 SALL3Q9BXA9 1300 aa15.78■□□□□ 0.12
GPC3-201ENST00000370818 SDSP20132 328 aa15.78■□□□□ 0.12
GPC3-201ENST00000370818 PKD1L3Q7Z443 1732 aa15.77■□□□□ 0.12
GPC3-201ENST00000370818 WDR17Q8IZU2 1322 aa15.77■□□□□ 0.12
GPC3-201ENST00000370818 PDE1AP54750 535 aa15.77■□□□□ 0.12
GPC3-201ENST00000370818 LRRCC1Q9C099 1032 aa15.77■□□□□ 0.12
GPC3-201ENST00000370818 MAP3K2Q9Y2U5 619 aa15.77■□□□□ 0.12
GPC3-201ENST00000370818 POLA2Q14181 598 aa15.77■□□□□ 0.11
GPC3-201ENST00000370818 KSR2Q6VAB6 950 aa15.77■□□□□ 0.11
GPC3-201ENST00000370818 PPP1R42Q7Z4L9 355 aa15.77■□□□□ 0.11
GPC3-201ENST00000370818 KIF2CQ99661 725 aa15.77■□□□□ 0.11
GPC3-201ENST00000370818 ANTXR1Q9H6X2 564 aa15.77■□□□□ 0.11
GPC3-201ENST00000370818 DDX21Q9NR30 783 aaKnown RBP eCLIP15.77■□□□□ 0.11
GPC3-201ENST00000370818 HYPKQ9NX55 129 aa15.77■□□□□ 0.11
GPC3-201ENST00000370818 ZNF496Q96IT1 587 aaPredicted RBP15.76■□□□□ 0.11
GPC3-201ENST00000370818 ARXQ96QS3 562 aa15.76■□□□□ 0.11
GPC3-201ENST00000370818 SLKQ9H2G2 1235 aaPredicted RBP15.76■□□□□ 0.11
GPC3-201ENST00000370818 COL5A2P05997 1499 aaPredicted RBP15.75■□□□□ 0.11
GPC3-201ENST00000370818 HSP90AB1P08238 724 aaKnown RBP15.74■□□□□ 0.11
GPC3-201ENST00000370818 TOM1L2Q6ZVM7 507 aa15.74■□□□□ 0.11
GPC3-201ENST00000370818 ALDH1L1O75891 902 aa15.74■□□□□ 0.11
GPC3-201ENST00000370818 C5P01031 1676 aa15.73■□□□□ 0.11
GPC3-201ENST00000370818 SRGAP3O43295 1099 aa15.73■□□□□ 0.11
GPC3-201ENST00000370818 CWF19L2Q2TBE0 894 aaKnown RBP15.73■□□□□ 0.11
GPC3-201ENST00000370818 TSHZ3Q63HK5 1081 aa15.73■□□□□ 0.11
GPC3-201ENST00000370818 MX1P20591 662 aa15.72■□□□□ 0.11
GPC3-201ENST00000370818 ABCA3Q99758 1704 aa15.72■□□□□ 0.11
GPC3-201ENST00000370818 AIMP1Q12904 312 aaKnown RBP15.72■□□□□ 0.11
GPC3-201ENST00000370818 LRP10Q7Z4F1 713 aa15.72■□□□□ 0.11
GPC3-201ENST00000370818 USP16Q9Y5T5 823 aa15.72■□□□□ 0.11
GPC3-201ENST00000370818 SURF6O75683 361 aaKnown RBP15.71■□□□□ 0.11
GPC3-201ENST00000370818 SNRPA1P09661 255 aaKnown RBP15.71■□□□□ 0.11
GPC3-201ENST00000370818 CABP4P57796 275 aa15.71■□□□□ 0.11
GPC3-201ENST00000370818 SNX21Q969T3 373 aa15.71■□□□□ 0.11
GPC3-201ENST00000370818 PDCL3Q9H2J4 239 aa15.71■□□□□ 0.11
GPC3-201ENST00000370818 MTX1Q13505 466 aa15.71■□□□□ 0.1
GPC3-201ENST00000370818 TTC5Q8N0Z6 440 aa15.71■□□□□ 0.1
GPC3-201ENST00000370818 LINS1Q8NG48 757 aa15.71■□□□□ 0.1
GPC3-201ENST00000370818 ZCRB1Q8TBF4 217 aaKnown RBP15.71■□□□□ 0.1
GPC3-201ENST00000370818 STAP2Q9UGK3 403 aa15.71■□□□□ 0.1
GPC3-201ENST00000370818 NHSL1Q5SYE7 1610 aa15.7■□□□□ 0.1
GPC3-201ENST00000370818 RAB11FIP3O75154 756 aa15.7■□□□□ 0.1
GPC3-201ENST00000370818 DDX58O95786 925 aaKnown RBP15.7■□□□□ 0.1
GPC3-201ENST00000370818 MYL6BP14649 208 aa15.7■□□□□ 0.1
GPC3-201ENST00000370818 CARD10Q9BWT7 1032 aa15.7■□□□□ 0.1
GPC3-201ENST00000370818 IL1RAPL2Q9NP60 686 aa15.7■□□□□ 0.1
GPC3-201ENST00000370818 C9orf78Q9NZ63 289 aaPredicted RBP15.7■□□□□ 0.1
GPC3-201ENST00000370818 PCDH11XQ9BZA7 1347 aa15.7■□□□□ 0.1
GPC3-201ENST00000370818 PCDH11YQ9BZA8 1340 aa15.7■□□□□ 0.1
GPC3-201ENST00000370818 ESPNB1AK53 854 aa15.7■□□□□ 0.1
GPC3-201ENST00000370818 FMNL2Q96PY5 1086 aa15.7■□□□□ 0.1
GPC3-201ENST00000370818 PARP4Q9UKK3 1724 aaKnown RBP15.69■□□□□ 0.1
GPC3-201ENST00000370818 LARP1Q6PKG0 1096 aaKnown RBP15.69■□□□□ 0.1
GPC3-201ENST00000370818 SPRYD3Q8NCJ5 442 aa15.69■□□□□ 0.1
GPC3-201ENST00000370818 RHPN1Q8TCX5 695 aa15.69■□□□□ 0.1
GPC3-201ENST00000370818 XAGE3Q8WTP9 111 aa15.69■□□□□ 0.1
GPC3-201ENST00000370818 USP26Q9BXU7 913 aa15.69■□□□□ 0.1
GPC3-201ENST00000370818 UTYO14607 1347 aa15.69■□□□□ 0.1
GPC3-201ENST00000370818 GLI3P10071 1580 aa15.69■□□□□ 0.1
GPC3-201ENST00000370818 IGKV5-2P06315 115 aa15.69■□□□□ 0.1
GPC3-201ENST00000370818 HSCBQ8IWL3 235 aa15.69■□□□□ 0.1
GPC3-201ENST00000370818 GZF1Q9H116 711 aaPredicted RBP15.69■□□□□ 0.1
GPC3-201ENST00000370818 IL2RBP14784 551 aa15.68■□□□□ 0.1
GPC3-201ENST00000370818 COPS6Q7L5N1 327 aa15.68■□□□□ 0.1
GPC3-201ENST00000370818 KAZALD1Q96I82 304 aa15.68■□□□□ 0.1
GPC3-201ENST00000370818 STRN4Q9NRL3 753 aa15.68■□□□□ 0.1
GPC3-201ENST00000370818 ERBB4Q15303 1308 aa15.68■□□□□ 0.1
GPC3-201ENST00000370818 GRM8O00222 908 aa15.68■□□□□ 0.1
GPC3-201ENST00000370818 CD2BP2O95400 341 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms