RNA–Protein interactions for RNA: ENST00000370126.1

RTCA-202, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-202ENST00000370126 ZNF496Q96IT1 587 aaPredicted RBP28.88■■■□□ 2.21
RTCA-202ENST00000370126 A0A0G2JLW4 131 aa28.87■■■□□ 2.21
RTCA-202ENST00000370126 ADCY9O60503 1353 aa28.87■■■□□ 2.21
RTCA-202ENST00000370126 HEG1Q9ULI3 1381 aa28.87■■■□□ 2.21
RTCA-202ENST00000370126 ATP10DQ9P241 1426 aa28.86■■■□□ 2.21
RTCA-202ENST00000370126 FCHSD2O94868 740 aa28.86■■■□□ 2.21
RTCA-202ENST00000370126 STARD3NLO95772 234 aa28.85■■■□□ 2.21
RTCA-202ENST00000370126 DPEP1P16444 411 aa28.85■■■□□ 2.21
RTCA-202ENST00000370126 TM4SF1P30408 202 aa28.85■■■□□ 2.21
RTCA-202ENST00000370126 NARFQ9UHQ1 456 aa28.85■■■□□ 2.21
RTCA-202ENST00000370126 POLRMTO00411 1230 aaKnown RBP28.84■■■□□ 2.21
RTCA-202ENST00000370126 CANXP27824 592 aaKnown RBP28.82■■■□□ 2.2
RTCA-202ENST00000370126 BCS1LQ9Y276 419 aa28.82■■■□□ 2.2
RTCA-202ENST00000370126 AFDNP55196 1824 aaKnown RBP28.81■■■□□ 2.2
RTCA-202ENST00000370126 GIGYF1O75420 1035 aaPredicted RBP28.81■■■□□ 2.2
RTCA-202ENST00000370126 C1QTNF8P60827 252 aa28.81■■■□□ 2.2
RTCA-202ENST00000370126 FMNL2Q96PY5 1086 aa28.81■■■□□ 2.2
RTCA-202ENST00000370126 TEX13AQ9BXU3 409 aaPredicted RBP28.81■■■□□ 2.2
RTCA-202ENST00000370126 BTBD11A6QL63 1104 aa28.8■■■□□ 2.2
RTCA-202ENST00000370126 KCNA3P22001 575 aa28.8■■■□□ 2.2
RTCA-202ENST00000370126 EIF5P55010 431 aaKnown RBP28.8■■■□□ 2.2
RTCA-202ENST00000370126 BCL2L12Q9HB09 334 aa28.8■■■□□ 2.2
RTCA-202ENST00000370126 NRXN2Q9P2S2 1712 aa28.8■■■□□ 2.2
RTCA-202ENST00000370126 ARFGEF1Q9Y6D6 1849 aa28.79■■■□□ 2.2
RTCA-202ENST00000370126 NFIXQ14938 502 aa28.79■■■□□ 2.2
RTCA-202ENST00000370126 SCN7AQ01118 1682 aa28.78■■■□□ 2.2
RTCA-202ENST00000370126 KCNQ3O43525 872 aa28.78■■■□□ 2.2
RTCA-202ENST00000370126 RTF1Q92541 710 aaKnown RBP28.78■■■□□ 2.2
RTCA-202ENST00000370126 MCM10Q7L590 875 aa28.77■■■□□ 2.2
RTCA-202ENST00000370126 A0A087WZG4 1122 aa28.76■■■□□ 2.19
RTCA-202ENST00000370126 HTATSF1O43719 755 aaKnown RBP28.75■■■□□ 2.19
RTCA-202ENST00000370126 PIM2Q9P1W9 311 aa28.74■■■□□ 2.19
RTCA-202ENST00000370126 DLG5Q8TDM6 1919 aa28.73■■■□□ 2.19
RTCA-202ENST00000370126 IL6STP40189 918 aaPredicted RBP28.73■■■□□ 2.19
RTCA-202ENST00000370126 DCTN1Q14203 1278 aa28.73■■■□□ 2.19
RTCA-202ENST00000370126 CHRNA5P30532 468 aa28.72■■■□□ 2.19
RTCA-202ENST00000370126 GPBP1L1Q9HC44 474 aaPredicted RBP28.72■■■□□ 2.19
RTCA-202ENST00000370126 A1BGP04217 495 aa28.71■■■□□ 2.19
RTCA-202ENST00000370126 ARHGAP27Q6ZUM4 889 aa28.71■■■□□ 2.19
RTCA-202ENST00000370126 SERPINB2P05120 415 aa28.7■■■□□ 2.18
RTCA-202ENST00000370126 DALRD3Q5D0E6 543 aaKnown RBP28.7■■■□□ 2.18
RTCA-202ENST00000370126 ZNF330Q9Y3S2 320 aaPredicted RBP28.7■■■□□ 2.18
RTCA-202ENST00000370126 DLEC1Q9Y238 1755 aa28.7■■■□□ 2.18
RTCA-202ENST00000370126 ZNF526Q8TF50 670 aaPredicted RBP28.69■■■□□ 2.18
RTCA-202ENST00000370126 BCORQ6W2J9 1755 aa28.68■■■□□ 2.18
RTCA-202ENST00000370126 PLEKHF1Q96S99 279 aa28.68■■■□□ 2.18
RTCA-202ENST00000370126 TBC1D2BQ9UPU7 963 aa28.68■■■□□ 2.18
RTCA-202ENST00000370126 PRAMEF22A3QJZ6 481 aa28.67■■■□□ 2.18
RTCA-202ENST00000370126 NEFMP07197 916 aa28.67■■■□□ 2.18
RTCA-202ENST00000370126 BICDL1Q6ZP65 573 aa28.67■■■□□ 2.18
RTCA-202ENST00000370126 USP16Q9Y5T5 823 aa28.67■■■□□ 2.18
RTCA-202ENST00000370126 SNRPA1P09661 255 aaKnown RBP28.66■■■□□ 2.18
RTCA-202ENST00000370126 TBC1D9BQ66K14 1250 aa28.66■■■□□ 2.18
RTCA-202ENST00000370126 CARMIL3Q8ND23 1372 aa28.65■■■□□ 2.18
RTCA-202ENST00000370126 SENP3-EIF4A1A0A087X0R7 540 aa28.65■■■□□ 2.18
RTCA-202ENST00000370126 RALBP1Q15311 655 aa28.64■■■□□ 2.18
RTCA-202ENST00000370126 TAF7Q15545 349 aaPredicted RBP28.64■■■□□ 2.18
RTCA-202ENST00000370126 NPM2Q86SE8 214 aaKnown RBP28.64■■■□□ 2.18
RTCA-202ENST00000370126 KDM3BQ7LBC6 1761 aa28.64■■■□□ 2.18
RTCA-202ENST00000370126 CAMTA2O94983 1202 aa28.63■■■□□ 2.17
RTCA-202ENST00000370126 ANKRD31Q8N7Z5 1873 aa28.63■■■□□ 2.17
RTCA-202ENST00000370126 LAMB4A4D0S4 1761 aa28.62■■■□□ 2.17
RTCA-202ENST00000370126 PIP4K2AP48426 406 aaPredicted RBP28.62■■■□□ 2.17
RTCA-202ENST00000370126 NFE2L2Q16236 605 aa28.62■■■□□ 2.17
RTCA-202ENST00000370126 DZIP3Q86Y13 1208 aaKnown RBP28.6■■■□□ 2.17
RTCA-202ENST00000370126 PNNQ9H307 717 aaKnown RBP28.6■■■□□ 2.17
RTCA-202ENST00000370126 MIS18AQ9NYP9 233 aa28.6■■■□□ 2.17
RTCA-202ENST00000370126 DDX10Q13206 875 aaKnown RBP28.59■■■□□ 2.17
RTCA-202ENST00000370126 MAPK8IP3Q9UPT6 1336 aa28.59■■■□□ 2.17
RTCA-202ENST00000370126 SBF1O95248 1867 aa28.58■■■□□ 2.17
RTCA-202ENST00000370126 C9orf131Q5VYM1 1079 aa28.58■■■□□ 2.17
RTCA-202ENST00000370126 C2CD5Q86YS7 1000 aa28.58■■■□□ 2.17
RTCA-202ENST00000370126 PRR5LQ6MZQ0 368 aa28.57■■■□□ 2.16
RTCA-202ENST00000370126 PNISRQ8TF01 805 aaKnown RBP28.57■■■□□ 2.16
RTCA-202ENST00000370126 COL11A2P13942 1736 aaPredicted RBP28.57■■■□□ 2.16
RTCA-202ENST00000370126 NBPF26B4DH59 902 aa28.56■■■□□ 2.16
RTCA-202ENST00000370126 H0YIN7 160 aa28.56■■■□□ 2.16
RTCA-202ENST00000370126 NBPF10Q6P3W6 841 aaKnown RBP28.56■■■□□ 2.16
RTCA-202ENST00000370126 NBPF15Q8N660 670 aa28.56■■■□□ 2.16
RTCA-202ENST00000370126 SETDB2Q96T68 719 aa28.56■■■□□ 2.16
RTCA-202ENST00000370126 KIF3CO14782 793 aa28.55■■■□□ 2.16
RTCA-202ENST00000370126 TTLL6Q8N841 843 aa28.55■■■□□ 2.16
RTCA-202ENST00000370126 THUMPD2Q9BTF0 503 aaKnown RBP28.55■■■□□ 2.16
RTCA-202ENST00000370126 BRIP1Q9BX63 1249 aa28.55■■■□□ 2.16
RTCA-202ENST00000370126 CEP350Q5VT06 3117 aa28.54■■■□□ 2.16
RTCA-202ENST00000370126 CLEC4GQ6UXB4 293 aa28.53■■■□□ 2.16
RTCA-202ENST00000370126 PDZRN3Q9UPQ7 1066 aa28.53■■■□□ 2.16
RTCA-202ENST00000370126 MYBBP1AQ9BQG0 1328 aaKnown RBP28.52■■■□□ 2.16
RTCA-202ENST00000370126 PDE6BP35913 854 aa28.52■■■□□ 2.16
RTCA-202ENST00000370126 CCDC24Q8N4L8 307 aa28.52■■■□□ 2.16
RTCA-202ENST00000370126 CNBD1Q8NA66 436 aa28.52■■■□□ 2.16
RTCA-202ENST00000370126 RNF181Q9P0P0 153 aa28.52■■■□□ 2.16
RTCA-202ENST00000370126 ZNF652Q9Y2D9 606 aa28.51■■■□□ 2.15
RTCA-202ENST00000370126 RGL2O15211 777 aa28.5■■■□□ 2.15
RTCA-202ENST00000370126 EIF4A1P60842 406 aaKnown RBP28.5■■■□□ 2.15
RTCA-202ENST00000370126 RASSF7Q02833 373 aa28.49■■■□□ 2.15
RTCA-202ENST00000370126 ST5P78524 1137 aa28.48■■■□□ 2.15
RTCA-202ENST00000370126 NPHP1O15259 732 aa28.47■■■□□ 2.15
RTCA-202ENST00000370126 ZNF622Q969S3 477 aaKnown RBP eCLIP28.47■■■□□ 2.15
RTCA-202ENST00000370126 NMRK2Q9NPI5 230 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms