RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 DLG5Q8TDM6 1919 aa20.23■□□□□ 0.83
DKC1-201ENST00000369550 CDK12Q9NYV4 1490 aaPredicted RBP20.23■□□□□ 0.83
DKC1-201ENST00000369550 CCDC192P0DO97 292 aa20.23■□□□□ 0.83
DKC1-201ENST00000369550 HSPA4P34932 840 aa20.23■□□□□ 0.83
DKC1-201ENST00000369550 KIAA0232Q92628 1395 aa20.22■□□□□ 0.83
DKC1-201ENST00000369550 PTGS1P23219 599 aa20.22■□□□□ 0.83
DKC1-201ENST00000369550 HDGFP51858 240 aaKnown RBP20.22■□□□□ 0.83
DKC1-201ENST00000369550 OGFRQ9NZT2 677 aa20.22■□□□□ 0.83
DKC1-201ENST00000369550 IL25Q9H293 177 aa20.21■□□□□ 0.83
DKC1-201ENST00000369550 NCBP1Q09161 790 aaKnown RBP20.21■□□□□ 0.83
DKC1-201ENST00000369550 AEBP1Q8IUX7 1158 aa20.21■□□□□ 0.83
DKC1-201ENST00000369550 IL17RAQ96F46 866 aa20.21■□□□□ 0.83
DKC1-201ENST00000369550 COG3Q96JB2 828 aa20.21■□□□□ 0.83
DKC1-201ENST00000369550 C16orf45Q96MC5 204 aaPredicted RBP20.21■□□□□ 0.83
DKC1-201ENST00000369550 DNM1Q05193 864 aaKnown RBP20.2■□□□□ 0.82
DKC1-201ENST00000369550 SULT6B1Q6IMI4 303 aa20.2■□□□□ 0.82
DKC1-201ENST00000369550 G2E3Q7L622 706 aa20.2■□□□□ 0.82
DKC1-201ENST00000369550 AK2P54819 239 aa20.2■□□□□ 0.82
DKC1-201ENST00000369550 DRC7Q8IY82 874 aa20.2■□□□□ 0.82
DKC1-201ENST00000369550 LIMCH1Q9UPQ0 1083 aa20.2■□□□□ 0.82
DKC1-201ENST00000369550 FGD1P98174 961 aa20.19■□□□□ 0.82
DKC1-201ENST00000369550 WAPLQ7Z5K2 1190 aa20.19■□□□□ 0.82
DKC1-201ENST00000369550 MIS18AQ9NYP9 233 aa20.19■□□□□ 0.82
DKC1-201ENST00000369550 UBR1Q8IWV7 1749 aa20.19■□□□□ 0.82
DKC1-201ENST00000369550 PNMA6EA0A0J9YXQ4 647 aa20.19■□□□□ 0.82
DKC1-201ENST00000369550 MAP4K4O95819 1239 aaPredicted RBP20.18■□□□□ 0.82
DKC1-201ENST00000369550 TAF3Q5VWG9 929 aa20.18■□□□□ 0.82
DKC1-201ENST00000369550 CHMP3Q9Y3E7 222 aa20.18■□□□□ 0.82
DKC1-201ENST00000369550 ATP7BP35670 1465 aa20.18■□□□□ 0.82
DKC1-201ENST00000369550 METP08581 1390 aa20.17■□□□□ 0.82
DKC1-201ENST00000369550 FAM200AQ8TCP9 573 aa20.17■□□□□ 0.82
DKC1-201ENST00000369550 CGNQ9P2M7 1197 aaKnown RBP20.17■□□□□ 0.82
DKC1-201ENST00000369550 STAP2Q9UGK3 403 aa20.17■□□□□ 0.82
DKC1-201ENST00000369550 SNX14Q9Y5W7 946 aa20.17■□□□□ 0.82
DKC1-201ENST00000369550 RUFY3Q7L099 469 aa20.17■□□□□ 0.82
DKC1-201ENST00000369550 CCDC186Q7Z3E2 898 aa20.17■□□□□ 0.82
DKC1-201ENST00000369550 KLHL34Q8N239 644 aa20.17■□□□□ 0.82
DKC1-201ENST00000369550 IL1RAPL2Q9NP60 686 aa20.17■□□□□ 0.82
DKC1-201ENST00000369550 DTNBO60941 627 aa20.16■□□□□ 0.82
DKC1-201ENST00000369550 TMEM2Q9UHN6 1383 aa20.16■□□□□ 0.82
DKC1-201ENST00000369550 VPS37CA5D8V6 355 aaPredicted RBP20.16■□□□□ 0.82
DKC1-201ENST00000369550 SMTNL1A8MU46 457 aa20.16■□□□□ 0.82
DKC1-201ENST00000369550 GNAI3P08754 354 aa20.16■□□□□ 0.82
DKC1-201ENST00000369550 BBXQ8WY36 941 aaPredicted RBP20.16■□□□□ 0.82
DKC1-201ENST00000369550 AATKQ6ZMQ8 1374 aa20.16■□□□□ 0.82
DKC1-201ENST00000369550 RAD50Q92878 1312 aa20.15■□□□□ 0.82
DKC1-201ENST00000369550 EPB41L2O43491 1005 aaKnown RBP20.15■□□□□ 0.82
DKC1-201ENST00000369550 GJB2P29033 226 aa20.15■□□□□ 0.82
DKC1-201ENST00000369550 CAMK4Q16566 473 aa20.15■□□□□ 0.82
DKC1-201ENST00000369550 LUZP1Q86V48 1076 aa20.15■□□□□ 0.82
DKC1-201ENST00000369550 TTC14Q96N46 770 aa20.15■□□□□ 0.82
DKC1-201ENST00000369550 TECPR2O15040 1411 aa20.15■□□□□ 0.82
DKC1-201ENST00000369550 TNNT1P13805 278 aa20.15■□□□□ 0.82
DKC1-201ENST00000369550 LRMPQ12912 555 aa20.15■□□□□ 0.82
DKC1-201ENST00000369550 CCDC83Q8IWF9 413 aa20.15■□□□□ 0.82
DKC1-201ENST00000369550 RTF1Q92541 710 aaKnown RBP20.15■□□□□ 0.82
DKC1-201ENST00000369550 CTNNA3Q9UI47 895 aa20.15■□□□□ 0.82
DKC1-201ENST00000369550 EDC4Q6P2E9 1401 aaKnown RBP20.14■□□□□ 0.82
DKC1-201ENST00000369550 ATP8B2P98198 1209 aa20.14■□□□□ 0.82
DKC1-201ENST00000369550 MAP3K11Q16584 847 aa20.14■□□□□ 0.82
DKC1-201ENST00000369550 NUTM1Q86Y26 1132 aa20.14■□□□□ 0.82
DKC1-201ENST00000369550 CCDC112Q8NEF3 446 aa20.14■□□□□ 0.82
DKC1-201ENST00000369550 SIRT1Q96EB6 747 aa20.14■□□□□ 0.82
DKC1-201ENST00000369550 STK31Q9BXU1 1019 aa20.14■□□□□ 0.81
DKC1-201ENST00000369550 CPA1P15085 419 aa20.13■□□□□ 0.81
DKC1-201ENST00000369550 CASTP20810 708 aaKnown RBP20.13■□□□□ 0.81
DKC1-201ENST00000369550 RASEFQ8IZ41 740 aa20.13■□□□□ 0.81
DKC1-201ENST00000369550 NUP62CLQ9H1M0 184 aa20.13■□□□□ 0.81
DKC1-201ENST00000369550 TSPYL4Q9UJ04 414 aa20.13■□□□□ 0.81
DKC1-201ENST00000369550 SYCP1Q15431 976 aa20.13■□□□□ 0.81
DKC1-201ENST00000369550 TRIM5Q9C035 493 aa20.13■□□□□ 0.81
DKC1-201ENST00000369550 MTMR6Q9Y217 621 aa20.13■□□□□ 0.81
DKC1-201ENST00000369550 CPS1P31327 1500 aa20.13■□□□□ 0.81
DKC1-201ENST00000369550 TYRO3Q06418 890 aa20.12■□□□□ 0.81
DKC1-201ENST00000369550 GABPB1Q06547 395 aaPredicted RBP20.12■□□□□ 0.81
DKC1-201ENST00000369550 SGSM2O43147 1006 aa20.12■□□□□ 0.81
DKC1-201ENST00000369550 LARGE1O95461 756 aa20.12■□□□□ 0.81
DKC1-201ENST00000369550 BCL11BQ9C0K0 894 aaPredicted RBP20.12■□□□□ 0.81
DKC1-201ENST00000369550 LRRFIP2Q9Y608 721 aaKnown RBP20.12■□□□□ 0.81
DKC1-201ENST00000369550 WASLO00401 505 aaPredicted RBP20.11■□□□□ 0.81
DKC1-201ENST00000369550 NAA30Q147X3 362 aaPredicted RBP20.11■□□□□ 0.81
DKC1-201ENST00000369550 TPD52L1Q16890 204 aaPredicted RBP20.11■□□□□ 0.81
DKC1-201ENST00000369550 ZNF592Q92610 1267 aa20.11■□□□□ 0.81
DKC1-201ENST00000369550 PAXBP1Q9Y5B6 917 aa20.11■□□□□ 0.81
DKC1-201ENST00000369550 MRVI1Q9Y6F6 885 aa20.11■□□□□ 0.81
DKC1-201ENST00000369550 EIF4A2Q14240 407 aaKnown RBP20.11■□□□□ 0.81
DKC1-201ENST00000369550 CKAP2LQ8IYA6 745 aa20.11■□□□□ 0.81
DKC1-201ENST00000369550 NRBP1Q9UHY1 535 aa20.11■□□□□ 0.81
DKC1-201ENST00000369550 AOX1Q06278 1338 aa20.11■□□□□ 0.81
DKC1-201ENST00000369550 DDX41Q9UJV9 622 aaKnown RBP20.1■□□□□ 0.81
DKC1-201ENST00000369550 CWC27Q6UX04 472 aaKnown RBP20.1■□□□□ 0.81
DKC1-201ENST00000369550 TXNDC2Q86VQ3 553 aa20.1■□□□□ 0.81
DKC1-201ENST00000369550 SPG7Q9UQ90 795 aa20.1■□□□□ 0.81
DKC1-201ENST00000369550 ANO6Q4KMQ2 910 aa20.09■□□□□ 0.81
DKC1-201ENST00000369550 ZSCAN25Q6NSZ9 544 aa20.09■□□□□ 0.81
DKC1-201ENST00000369550 LSG1Q9H089 658 aaKnown RBP20.09■□□□□ 0.81
DKC1-201ENST00000369550 TNMDQ9H2S6 317 aa20.09■□□□□ 0.81
DKC1-201ENST00000369550 GOLGA6L4A6NEF3 574 aa20.09■□□□□ 0.81
DKC1-201ENST00000369550 KRT85P78386 507 aa20.09■□□□□ 0.81
DKC1-201ENST00000369550 HYPKQ9NX55 129 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms