RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SBF2Q86WG5 1849 aa14□□□□□ -0.17
BRCC3-204ENST00000369462 KIF16BQ96L93 1317 aa14□□□□□ -0.17
BRCC3-204ENST00000369462 BRPF1P55201 1214 aaPredicted RBP14□□□□□ -0.17
BRCC3-204ENST00000369462 ATP6V1AP38606 617 aa14□□□□□ -0.17
BRCC3-204ENST00000369462 TEX13AQ9BXU3 409 aaPredicted RBP14□□□□□ -0.17
BRCC3-204ENST00000369462 DBF4Q9UBU7 674 aaPredicted RBP14□□□□□ -0.17
BRCC3-204ENST00000369462 NEFLP07196 543 aa13.99□□□□□ -0.17
BRCC3-204ENST00000369462 PIP4K2AP48426 406 aaPredicted RBP13.99□□□□□ -0.17
BRCC3-204ENST00000369462 PROSER3Q2NL68 480 aa13.99□□□□□ -0.17
BRCC3-204ENST00000369462 ZKSCAN2Q63HK3 967 aa13.99□□□□□ -0.17
BRCC3-204ENST00000369462 G2E3Q7L622 706 aa13.99□□□□□ -0.17
BRCC3-204ENST00000369462 C5P01031 1676 aa13.99□□□□□ -0.17
BRCC3-204ENST00000369462 BTAF1O14981 1849 aa13.98□□□□□ -0.17
BRCC3-204ENST00000369462 IPO8O15397 1037 aaKnown RBP13.98□□□□□ -0.17
BRCC3-204ENST00000369462 STARD3NLO95772 234 aa13.98□□□□□ -0.17
BRCC3-204ENST00000369462 A1BGP04217 495 aa13.98□□□□□ -0.17
BRCC3-204ENST00000369462 MYL6BP14649 208 aa13.98□□□□□ -0.17
BRCC3-204ENST00000369462 KCNQ4P56696 695 aa13.98□□□□□ -0.17
BRCC3-204ENST00000369462 C20orf194Q5TEA3 1177 aa13.98□□□□□ -0.17
BRCC3-204ENST00000369462 CLUAP1Q96AJ1 413 aa13.98□□□□□ -0.17
BRCC3-204ENST00000369462 PHAXQ9H814 394 aaKnown RBP13.98□□□□□ -0.17
BRCC3-204ENST00000369462 DDX21Q9NR30 783 aaKnown RBP eCLIP13.98□□□□□ -0.17
BRCC3-204ENST00000369462 PDIA6Q15084 440 aa13.97□□□□□ -0.17
BRCC3-204ENST00000369462 TNNQ9UQP3 1299 aa13.97□□□□□ -0.17
BRCC3-204ENST00000369462 TRIM27P14373 513 aa13.97□□□□□ -0.17
BRCC3-204ENST00000369462 ATF7IPQ6VMQ6 1270 aa13.97□□□□□ -0.17
BRCC3-204ENST00000369462 CYP19A1P11511 503 aaPredicted RBP13.96□□□□□ -0.17
BRCC3-204ENST00000369462 FLIIQ13045 1269 aa13.96□□□□□ -0.17
BRCC3-204ENST00000369462 ITPK1Q13572 414 aa13.96□□□□□ -0.17
BRCC3-204ENST00000369462 HYPKQ9NX55 129 aa13.96□□□□□ -0.17
BRCC3-204ENST00000369462 NBPF26B4DH59 902 aa13.96□□□□□ -0.18
BRCC3-204ENST00000369462 NBPF14Q5TI25 921 aa13.96□□□□□ -0.18
BRCC3-204ENST00000369462 NBPF10Q6P3W6 841 aaKnown RBP13.96□□□□□ -0.18
BRCC3-204ENST00000369462 NBPF15Q8N660 670 aa13.96□□□□□ -0.18
BRCC3-204ENST00000369462 ARHGAP45Q92619 1136 aa13.96□□□□□ -0.18
BRCC3-204ENST00000369462 CCNL1Q9UK58 526 aaPredicted RBP13.96□□□□□ -0.18
BRCC3-204ENST00000369462 APBA3O96018 575 aa13.95□□□□□ -0.18
BRCC3-204ENST00000369462 FKBP5Q13451 457 aaPredicted RBP13.95□□□□□ -0.18
BRCC3-204ENST00000369462 FKBP8Q14318 412 aa13.95□□□□□ -0.18
BRCC3-204ENST00000369462 PANK1Q8TE04 598 aa13.95□□□□□ -0.18
BRCC3-204ENST00000369462 FTSJ3Q8IY81 847 aaKnown RBP13.95□□□□□ -0.18
BRCC3-204ENST00000369462 PTPRCP08575 1304 aa13.95□□□□□ -0.18
BRCC3-204ENST00000369462 ERBB4Q15303 1308 aa13.95□□□□□ -0.18
BRCC3-204ENST00000369462 RLBP1P12271 317 aa13.94□□□□□ -0.18
BRCC3-204ENST00000369462 AIMP1Q12904 312 aaKnown RBP13.94□□□□□ -0.18
BRCC3-204ENST00000369462 PDE3AQ14432 1141 aa13.94□□□□□ -0.18
BRCC3-204ENST00000369462 DZIP1LQ8IYY4 767 aaKnown RBP13.94□□□□□ -0.18
BRCC3-204ENST00000369462 API5Q9BZZ5 524 aaKnown RBP13.94□□□□□ -0.18
BRCC3-204ENST00000369462 ZNF330Q9Y3S2 320 aaPredicted RBP13.94□□□□□ -0.18
BRCC3-204ENST00000369462 ZBTB1Q9Y2K1 713 aa13.93□□□□□ -0.18
BRCC3-204ENST00000369462 LAMB4A4D0S4 1761 aa13.93□□□□□ -0.18
BRCC3-204ENST00000369462 F6X3S4 739 aa13.93□□□□□ -0.18
BRCC3-204ENST00000369462 CRKLP46109 303 aaKnown RBP13.93□□□□□ -0.18
BRCC3-204ENST00000369462 COPS6Q7L5N1 327 aa13.93□□□□□ -0.18
BRCC3-204ENST00000369462 LRP10Q7Z4F1 713 aa13.93□□□□□ -0.18
BRCC3-204ENST00000369462 XAGE3Q8WTP9 111 aa13.93□□□□□ -0.18
BRCC3-204ENST00000369462 CACNA1FO60840 1977 aa13.92□□□□□ -0.18
BRCC3-204ENST00000369462 MS4A1P11836 297 aa13.92□□□□□ -0.18
BRCC3-204ENST00000369462 LINC00116Q8NCU8 138 aa13.92□□□□□ -0.18
BRCC3-204ENST00000369462 GTF3C3Q9Y5Q9 886 aa13.92□□□□□ -0.18
BRCC3-204ENST00000369462 LRRC4BQ9NT99 713 aa13.92□□□□□ -0.18
BRCC3-204ENST00000369462 CCDC87Q9NVE4 849 aa13.92□□□□□ -0.18
BRCC3-204ENST00000369462 COG6Q9Y2V7 657 aa13.92□□□□□ -0.18
BRCC3-204ENST00000369462 TJP1Q07157 1748 aa13.92□□□□□ -0.18
BRCC3-204ENST00000369462 PLSCR1O15162 318 aa13.91□□□□□ -0.18
BRCC3-204ENST00000369462 PI4KAP2A4QPH2 592 aa13.91□□□□□ -0.18
BRCC3-204ENST00000369462 INTS5Q6P9B9 1019 aaKnown RBP13.91□□□□□ -0.18
BRCC3-204ENST00000369462 SLC4A10Q6U841 1118 aa13.91□□□□□ -0.18
BRCC3-204ENST00000369462 PI4KAP1Q8N8J0 262 aa13.91□□□□□ -0.18
BRCC3-204ENST00000369462 CRBNQ96SW2 442 aa13.91□□□□□ -0.18
BRCC3-204ENST00000369462 NPM3O75607 178 aaKnown RBP13.91□□□□□ -0.18
BRCC3-204ENST00000369462 PROM2Q8N271 834 aa13.91□□□□□ -0.18
BRCC3-204ENST00000369462 TXNRD1Q16881 649 aa13.9□□□□□ -0.18
BRCC3-204ENST00000369462 TMEM57Q8N5G2 664 aa13.9□□□□□ -0.18
BRCC3-204ENST00000369462 ARXQ96QS3 562 aa13.9□□□□□ -0.18
BRCC3-204ENST00000369462 DDX58O95786 925 aaKnown RBP13.9□□□□□ -0.18
BRCC3-204ENST00000369462 SLC27A3Q5K4L6 730 aa13.9□□□□□ -0.18
BRCC3-204ENST00000369462 NPM2Q86SE8 214 aaKnown RBP13.9□□□□□ -0.18
BRCC3-204ENST00000369462 EXOC6Q8TAG9 804 aa13.9□□□□□ -0.18
BRCC3-204ENST00000369462 ABCC4O15439 1325 aa13.89□□□□□ -0.19
BRCC3-204ENST00000369462 TTLL7Q6ZT98 887 aa13.89□□□□□ -0.19
BRCC3-204ENST00000369462 ANKRD13DQ6ZTN6 518 aa13.89□□□□□ -0.19
BRCC3-204ENST00000369462 ITPRIPQ8IWB1 547 aa13.89□□□□□ -0.19
BRCC3-204ENST00000369462 LY75O60449 1722 aa13.89□□□□□ -0.19
BRCC3-204ENST00000369462 IL6STP40189 918 aaPredicted RBP13.89□□□□□ -0.19
BRCC3-204ENST00000369462 KSR2Q6VAB6 950 aa13.89□□□□□ -0.19
BRCC3-204ENST00000369462 RIC3Q7Z5B4 369 aa13.89□□□□□ -0.19
BRCC3-204ENST00000369462 MAP3K2Q9Y2U5 619 aa13.88□□□□□ -0.19
BRCC3-204ENST00000369462 ZNF831Q5JPB2 1677 aa13.88□□□□□ -0.19
BRCC3-204ENST00000369462 SF3B2Q13435 895 aaKnown RBP13.88□□□□□ -0.19
BRCC3-204ENST00000369462 MVPQ14764 893 aaKnown RBP13.88□□□□□ -0.19
BRCC3-204ENST00000369462 DNAAF4Q8WXU2 420 aa13.88□□□□□ -0.19
BRCC3-204ENST00000369462 ADCY9O60503 1353 aa13.88□□□□□ -0.19
BRCC3-204ENST00000369462 CNTNAP4Q9C0A0 1308 aa13.88□□□□□ -0.19
BRCC3-204ENST00000369462 MYH14Q7Z406 1995 aaKnown RBP13.87□□□□□ -0.19
BRCC3-204ENST00000369462 CICQ96RK0 1608 aaPredicted RBP13.87□□□□□ -0.19
BRCC3-204ENST00000369462 EIF5P55010 431 aaKnown RBP13.87□□□□□ -0.19
BRCC3-204ENST00000369462 RC3H1Q5TC82 1133 aaKnown RBP13.87□□□□□ -0.19
BRCC3-204ENST00000369462 ZBTB3Q9H5J0 574 aa13.87□□□□□ -0.19
BRCC3-204ENST00000369462 GNPATO15228 680 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms