RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 CHL1O00533 1208 aa21.03■□□□□ 0.96
CHTOP-203ENST00000368690 MEIS3Q99687 375 aa21.03■□□□□ 0.96
CHTOP-203ENST00000368690 PLEKHG5O94827 1062 aa21.02■□□□□ 0.96
CHTOP-203ENST00000368690 ZSCAN20P17040 1043 aaPredicted RBP21.02■□□□□ 0.96
CHTOP-203ENST00000368690 FOXD4L5Q5VV16 416 aaPredicted RBP21.02■□□□□ 0.96
CHTOP-203ENST00000368690 FOXD4L4Q8WXT5 416 aaPredicted RBP21.02■□□□□ 0.96
CHTOP-203ENST00000368690 GTPBP4Q9BZE4 634 aaKnown RBP21.02■□□□□ 0.96
CHTOP-203ENST00000368690 OVOS2A0A0J9YW53 1432 aa21.02■□□□□ 0.95
CHTOP-203ENST00000368690 OVOS2Q6IE36 1432 aa21.02■□□□□ 0.95
CHTOP-203ENST00000368690 USP48Q86UV5 1035 aa21.02■□□□□ 0.95
CHTOP-203ENST00000368690 ZNF710Q8N1W2 664 aa21.02■□□□□ 0.95
CHTOP-203ENST00000368690 TPM3P06753 285 aa21.01■□□□□ 0.95
CHTOP-203ENST00000368690 KIF3AQ9Y496 699 aa21.01■□□□□ 0.95
CHTOP-203ENST00000368690 C1orf167Q5SNV9 1468 aa21■□□□□ 0.95
CHTOP-203ENST00000368690 RPAP1Q9BWH6 1393 aaPredicted RBP21■□□□□ 0.95
CHTOP-203ENST00000368690 MX1P20591 662 aa21■□□□□ 0.95
CHTOP-203ENST00000368690 CADPS2Q86UW7 1296 aa21■□□□□ 0.95
CHTOP-203ENST00000368690 FAM83GA6ND36 823 aa20.99■□□□□ 0.95
CHTOP-203ENST00000368690 PIK3C2AO00443 1686 aa20.99■□□□□ 0.95
CHTOP-203ENST00000368690 GADD45BO75293 160 aaPredicted RBP20.99■□□□□ 0.95
CHTOP-203ENST00000368690 ADCY5O95622 1261 aa20.99■□□□□ 0.95
CHTOP-203ENST00000368690 CCT4P50991 539 aaKnown RBP20.99■□□□□ 0.95
CHTOP-203ENST00000368690 LMOD2Q6P5Q4 547 aa20.99■□□□□ 0.95
CHTOP-203ENST00000368690 CHMLP26374 656 aa20.98■□□□□ 0.95
CHTOP-203ENST00000368690 SRCIN1Q9C0H9 1055 aa20.98■□□□□ 0.95
CHTOP-203ENST00000368690 USP25Q9UHP3 1055 aa20.98■□□□□ 0.95
CHTOP-203ENST00000368690 APBB1O00213 710 aa20.97■□□□□ 0.95
CHTOP-203ENST00000368690 PALD1Q9ULE6 856 aa20.97■□□□□ 0.95
CHTOP-203ENST00000368690 TCHHQ07283 1943 aa20.97■□□□□ 0.95
CHTOP-203ENST00000368690 AOX1Q06278 1338 aa20.97■□□□□ 0.95
CHTOP-203ENST00000368690 KDM4AO75164 1064 aa20.97■□□□□ 0.95
CHTOP-203ENST00000368690 STAP2Q9UGK3 403 aa20.97■□□□□ 0.95
CHTOP-203ENST00000368690 DCCP43146 1447 aa20.96■□□□□ 0.95
CHTOP-203ENST00000368690 UBE2HP62256 183 aa20.96■□□□□ 0.95
CHTOP-203ENST00000368690 DIAPH3Q9NSV4 1193 aa20.96■□□□□ 0.95
CHTOP-203ENST00000368690 ARHGEF10O15013 1369 aa20.96■□□□□ 0.95
CHTOP-203ENST00000368690 MST1RQ04912 1400 aa20.96■□□□□ 0.95
CHTOP-203ENST00000368690 KIF20AO95235 890 aa20.95■□□□□ 0.94
CHTOP-203ENST00000368690 DCTN1Q14203 1278 aa20.95■□□□□ 0.94
CHTOP-203ENST00000368690 KRT24Q2M2I5 525 aa20.94■□□□□ 0.94
CHTOP-203ENST00000368690 LRRCC1Q9C099 1032 aa20.94■□□□□ 0.94
CHTOP-203ENST00000368690 ANO2Q9NQ90 1003 aa20.94■□□□□ 0.94
CHTOP-203ENST00000368690 XIRP1Q702N8 1843 aaKnown RBP20.94■□□□□ 0.94
CHTOP-203ENST00000368690 KIAA1524Q8TCG1 905 aa20.93■□□□□ 0.94
CHTOP-203ENST00000368690 TTC12Q9H892 705 aaPredicted RBP20.93■□□□□ 0.94
CHTOP-203ENST00000368690 USP31Q70CQ4 1352 aa20.93■□□□□ 0.94
CHTOP-203ENST00000368690 GNAI2P04899 355 aa20.93■□□□□ 0.94
CHTOP-203ENST00000368690 HSPA4P34932 840 aa20.93■□□□□ 0.94
CHTOP-203ENST00000368690 KRT28Q7Z3Y7 464 aa20.93■□□□□ 0.94
CHTOP-203ENST00000368690 DDX17Q92841 729 aaKnown RBP20.93■□□□□ 0.94
CHTOP-203ENST00000368690 FUCA2Q9BTY2 467 aa20.93■□□□□ 0.94
CHTOP-203ENST00000368690 PRDM10Q9NQV6 1147 aa20.93■□□□□ 0.94
CHTOP-203ENST00000368690 ATP6V1DQ9Y5K8 247 aa20.93■□□□□ 0.94
CHTOP-203ENST00000368690 ZNF830Q96NB3 372 aaPredicted RBP20.92■□□□□ 0.94
CHTOP-203ENST00000368690 ZSCAN22P10073 491 aaPredicted RBP20.92■□□□□ 0.94
CHTOP-203ENST00000368690 ARID3AQ99856 593 aa20.92■□□□□ 0.94
CHTOP-203ENST00000368690 BCL2L12Q9HB09 334 aa20.92■□□□□ 0.94
CHTOP-203ENST00000368690 GDPD2Q9HCC8 539 aa20.92■□□□□ 0.94
CHTOP-203ENST00000368690 KIF1AQ12756 1690 aa20.91■□□□□ 0.94
CHTOP-203ENST00000368690 HCLS1P14317 486 aaPredicted RBP20.91■□□□□ 0.94
CHTOP-203ENST00000368690 AMPHP49418 695 aa20.91■□□□□ 0.94
CHTOP-203ENST00000368690 CHAF1AQ13111 956 aaPredicted RBP20.91■□□□□ 0.94
CHTOP-203ENST00000368690 MAP3K19Q56UN5 1328 aa20.91■□□□□ 0.94
CHTOP-203ENST00000368690 SLC4A2P04920 1241 aa20.9■□□□□ 0.94
CHTOP-203ENST00000368690 PPP4R3BQ5MIZ7 849 aa20.9■□□□□ 0.94
CHTOP-203ENST00000368690 ANKRD7Q92527 254 aa20.9■□□□□ 0.94
CHTOP-203ENST00000368690 HSP90AB2PQ58FF8 381 aa20.9■□□□□ 0.94
CHTOP-203ENST00000368690 CRB1P82279 1406 aa20.9■□□□□ 0.94
CHTOP-203ENST00000368690 ZBTB7CA1YPR0 619 aa20.89■□□□□ 0.94
CHTOP-203ENST00000368690 GOLGA6L6A8MZA4 724 aa20.89■□□□□ 0.94
CHTOP-203ENST00000368690 CTIFO43310 598 aaKnown RBP20.89■□□□□ 0.94
CHTOP-203ENST00000368690 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.89■□□□□ 0.93
CHTOP-203ENST00000368690 N4BP2Q86UW6 1770 aaPredicted RBP20.88■□□□□ 0.93
CHTOP-203ENST00000368690 GNAI3P08754 354 aa20.88■□□□□ 0.93
CHTOP-203ENST00000368690 PDCL2Q8N4E4 241 aa20.88■□□□□ 0.93
CHTOP-203ENST00000368690 CNPY2Q9Y2B0 182 aa20.88■□□□□ 0.93
CHTOP-203ENST00000368690 ATP8B2P98198 1209 aa20.87■□□□□ 0.93
CHTOP-203ENST00000368690 SYCP1Q15431 976 aa20.87■□□□□ 0.93
CHTOP-203ENST00000368690 UPF3BQ9BZI7 483 aaKnown RBP20.87■□□□□ 0.93
CHTOP-203ENST00000368690 ATP2B3Q16720 1220 aa20.87■□□□□ 0.93
CHTOP-203ENST00000368690 ZHX1Q9UKY1 873 aaPredicted RBP20.87■□□□□ 0.93
CHTOP-203ENST00000368690 EXOC6BQ9Y2D4 811 aa20.87■□□□□ 0.93
CHTOP-203ENST00000368690 TRIM6-TRIM34B2RNG4 842 aa20.86■□□□□ 0.93
CHTOP-203ENST00000368690 STX6O43752 255 aa20.86■□□□□ 0.93
CHTOP-203ENST00000368690 NOL8Q76FK4 1167 aaKnown RBP20.86■□□□□ 0.93
CHTOP-203ENST00000368690 TSC1Q92574 1164 aa20.86■□□□□ 0.93
CHTOP-203ENST00000368690 JARID2Q92833 1246 aaPredicted RBP20.86■□□□□ 0.93
CHTOP-203ENST00000368690 RILPL2Q969X0 211 aa20.86■□□□□ 0.93
CHTOP-203ENST00000368690 TTC14Q96N46 770 aa20.86■□□□□ 0.93
CHTOP-203ENST00000368690 FEZ1Q99689 392 aa20.86■□□□□ 0.93
CHTOP-203ENST00000368690 RGPD1P0DJD0 1748 aa20.86■□□□□ 0.93
CHTOP-203ENST00000368690 PEAK1Q9H792 1746 aa20.86■□□□□ 0.93
CHTOP-203ENST00000368690 MARF1Q9Y4F3 1742 aaKnown RBP20.86■□□□□ 0.93
CHTOP-203ENST00000368690 F13A1P00488 732 aa20.86■□□□□ 0.93
CHTOP-203ENST00000368690 CBX1P83916 185 aa20.86■□□□□ 0.93
CHTOP-203ENST00000368690 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
CHTOP-203ENST00000368690 FLT4P35916 1363 aa20.85■□□□□ 0.93
CHTOP-203ENST00000368690 SLAIN2Q9P270 581 aa20.85■□□□□ 0.93
CHTOP-203ENST00000368690 NPHP3Q7Z494 1330 aa20.85■□□□□ 0.93
CHTOP-203ENST00000368690 RAD50Q92878 1312 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms