RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CCDC30Q5VVM6 783 aa15.35■□□□□ 0.05
USF1-203ENST00000368021 CLUAP1Q96AJ1 413 aa15.35■□□□□ 0.05
USF1-203ENST00000368021 TNNQ9UQP3 1299 aa15.35■□□□□ 0.05
USF1-203ENST00000368021 TNS1Q9HBL0 1735 aaKnown RBP15.35■□□□□ 0.05
USF1-203ENST00000368021 ERVV-2B6SEH9 535 aa15.34■□□□□ 0.05
USF1-203ENST00000368021 API5Q9BZZ5 524 aaKnown RBP15.34■□□□□ 0.05
USF1-203ENST00000368021 PTPRCP08575 1304 aa15.34■□□□□ 0.05
USF1-203ENST00000368021 NFATC2IPQ8NCF5 419 aa15.33■□□□□ 0.05
USF1-203ENST00000368021 TCERG1O14776 1098 aaKnown RBP15.33■□□□□ 0.04
USF1-203ENST00000368021 ZNF790Q6PG37 636 aa15.33■□□□□ 0.04
USF1-203ENST00000368021 STK31Q9BXU1 1019 aa15.33■□□□□ 0.04
USF1-203ENST00000368021 DDX19BQ9UMR2 479 aa15.33■□□□□ 0.04
USF1-203ENST00000368021 PLSCR1O15162 318 aa15.32■□□□□ 0.04
USF1-203ENST00000368021 ABCC4O15439 1325 aa15.32■□□□□ 0.04
USF1-203ENST00000368021 KCNQ3O43525 872 aa15.32■□□□□ 0.04
USF1-203ENST00000368021 SLC4A2P04920 1241 aa15.32■□□□□ 0.04
USF1-203ENST00000368021 CABP4P57796 275 aa15.32■□□□□ 0.04
USF1-203ENST00000368021 PROM2Q8N271 834 aa15.32■□□□□ 0.04
USF1-203ENST00000368021 KCNQ4P56696 695 aa15.31■□□□□ 0.04
USF1-203ENST00000368021 DOT1LQ8TEK3 1739 aa15.31■□□□□ 0.04
USF1-203ENST00000368021 GIGYF1O75420 1035 aaPredicted RBP15.31■□□□□ 0.04
USF1-203ENST00000368021 HDGFL1Q5TGJ6 251 aa15.31■□□□□ 0.04
USF1-203ENST00000368021 PIGBQ92521 554 aa15.31■□□□□ 0.04
USF1-203ENST00000368021 TXNRD1Q16881 649 aa15.3■□□□□ 0.04
USF1-203ENST00000368021 TMEM57Q8N5G2 664 aa15.3■□□□□ 0.04
USF1-203ENST00000368021 TMOD3Q9NYL9 352 aa15.3■□□□□ 0.04
USF1-203ENST00000368021 NHSQ6T4R5 1651 aa15.3■□□□□ 0.04
USF1-203ENST00000368021 ITPRIPQ8IWB1 547 aa15.29■□□□□ 0.04
USF1-203ENST00000368021 CHMP4BQ9H444 224 aaKnown RBP15.29■□□□□ 0.04
USF1-203ENST00000368021 RBM19Q9Y4C8 960 aaKnown RBP15.29■□□□□ 0.04
USF1-203ENST00000368021 TTC5Q8N0Z6 440 aa15.29■□□□□ 0.04
USF1-203ENST00000368021 BTAF1O14981 1849 aa15.28■□□□□ 0.04
USF1-203ENST00000368021 TOGARAM1Q9Y4F4 1720 aa15.28■□□□□ 0.04
USF1-203ENST00000368021 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
USF1-203ENST00000368021 SLC39A6Q13433 755 aa15.28■□□□□ 0.04
USF1-203ENST00000368021 ASAP1Q9ULH1 1129 aa15.27■□□□□ 0.04
USF1-203ENST00000368021 PAPPAQ13219 1627 aa15.27■□□□□ 0.04
USF1-203ENST00000368021 FLIIQ13045 1269 aa15.27■□□□□ 0.03
USF1-203ENST00000368021 INTS3Q68E01 1043 aaKnown RBP15.27■□□□□ 0.03
USF1-203ENST00000368021 FMNL2Q96PY5 1086 aa15.27■□□□□ 0.03
USF1-203ENST00000368021 LRRC4BQ9NT99 713 aa15.27■□□□□ 0.03
USF1-203ENST00000368021 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
USF1-203ENST00000368021 KDM2BQ8NHM5 1336 aa15.26■□□□□ 0.03
USF1-203ENST00000368021 EIF2S2P20042 333 aaKnown RBP15.26■□□□□ 0.03
USF1-203ENST00000368021 R3HDM1Q15032 1099 aaKnown RBP15.26■□□□□ 0.03
USF1-203ENST00000368021 ZNF496Q96IT1 587 aaPredicted RBP15.26■□□□□ 0.03
USF1-203ENST00000368021 DBF4Q9UBU7 674 aaPredicted RBP15.26■□□□□ 0.03
USF1-203ENST00000368021 CENPQQ7L2Z9 268 aaPredicted RBP15.25■□□□□ 0.03
USF1-203ENST00000368021 G2E3Q7L622 706 aa15.25■□□□□ 0.03
USF1-203ENST00000368021 ZBTB40Q9NUA8 1239 aa15.25■□□□□ 0.03
USF1-203ENST00000368021 DAXXQ9UER7 740 aaPredicted RBP15.25■□□□□ 0.03
USF1-203ENST00000368021 SNRPA1P09661 255 aaKnown RBP15.24■□□□□ 0.03
USF1-203ENST00000368021 NECTIN2Q92692 538 aa15.24■□□□□ 0.03
USF1-203ENST00000368021 ITGB4P16144 1822 aa15.24■□□□□ 0.03
USF1-203ENST00000368021 ZBTB7BO15156 539 aaPredicted RBP15.24■□□□□ 0.03
USF1-203ENST00000368021 NBPF14Q5TI25 921 aa15.24■□□□□ 0.03
USF1-203ENST00000368021 ANO8Q9HCE9 1232 aaPredicted RBP15.24■□□□□ 0.03
USF1-203ENST00000368021 CHPF2Q9P2E5 772 aa15.24■□□□□ 0.03
USF1-203ENST00000368021 CCNL1Q9UK58 526 aaPredicted RBP15.24■□□□□ 0.03
USF1-203ENST00000368021 PALLDQ8WX93 1383 aa15.24■□□□□ 0.03
USF1-203ENST00000368021 C5P01031 1676 aa15.24■□□□□ 0.03
USF1-203ENST00000368021 PXDNLA1KZ92 1463 aa15.23■□□□□ 0.03
USF1-203ENST00000368021 FKBP5Q13451 457 aaPredicted RBP15.23■□□□□ 0.03
USF1-203ENST00000368021 ATG3Q9NT62 314 aa15.23■□□□□ 0.03
USF1-203ENST00000368021 KCPQ6ZWJ8 1503 aa15.23■□□□□ 0.03
USF1-203ENST00000368021 PCDHB15Q9Y5E8 787 aa15.22■□□□□ 0.03
USF1-203ENST00000368021 LAMB4A4D0S4 1761 aa15.22■□□□□ 0.03
USF1-203ENST00000368021 PTCD1O75127 700 aaKnown RBP15.22■□□□□ 0.03
USF1-203ENST00000368021 CCT4P50991 539 aaKnown RBP15.22■□□□□ 0.03
USF1-203ENST00000368021 SMARCC1Q92922 1105 aaPredicted RBP15.22■□□□□ 0.03
USF1-203ENST00000368021 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
USF1-203ENST00000368021 DDX21Q9NR30 783 aaKnown RBP eCLIP15.22■□□□□ 0.03
USF1-203ENST00000368021 HYPKQ9NX55 129 aa15.22■□□□□ 0.03
USF1-203ENST00000368021 N4BP2Q86UW6 1770 aaPredicted RBP15.22■□□□□ 0.03
USF1-203ENST00000368021 PRAMEF22A3QJZ6 481 aa15.21■□□□□ 0.03
USF1-203ENST00000368021 SLC27A3Q5K4L6 730 aa15.21■□□□□ 0.03
USF1-203ENST00000368021 PHAXQ9H814 394 aaKnown RBP15.2■□□□□ 0.02
USF1-203ENST00000368021 LOC102724428A0A0B4J2F2 783 aa15.2■□□□□ 0.02
USF1-203ENST00000368021 SIK1P57059 783 aa15.2■□□□□ 0.02
USF1-203ENST00000368021 PDIA6Q15084 440 aa15.2■□□□□ 0.02
USF1-203ENST00000368021 RREB1Q92766 1687 aa15.19■□□□□ 0.02
USF1-203ENST00000368021 ERBB4Q15303 1308 aa15.19■□□□□ 0.02
USF1-203ENST00000368021 NUP188Q5SRE5 1749 aa15.19■□□□□ 0.02
USF1-203ENST00000368021 F6X3S4 739 aa15.19■□□□□ 0.02
USF1-203ENST00000368021 EIF5BO60841 1220 aaKnown RBP15.19■□□□□ 0.02
USF1-203ENST00000368021 ATP6V1AP38606 617 aa15.19■□□□□ 0.02
USF1-203ENST00000368021 HDAC1Q13547 482 aaPredicted RBP15.19■□□□□ 0.02
USF1-203ENST00000368021 ZNF827Q17R98 1081 aa15.19■□□□□ 0.02
USF1-203ENST00000368021 PDGFDQ9GZP0 370 aaPredicted RBP15.19■□□□□ 0.02
USF1-203ENST00000368021 RWDD1Q9H446 243 aaPredicted RBP15.19■□□□□ 0.02
USF1-203ENST00000368021 STK32BQ9NY57 414 aa15.19■□□□□ 0.02
USF1-203ENST00000368021 IGHDP01880 384 aa15.18■□□□□ 0.02
USF1-203ENST00000368021 SLC15A2Q16348 729 aa15.18■□□□□ 0.02
USF1-203ENST00000368021 VSIG10Q8N0Z9 540 aa15.18■□□□□ 0.02
USF1-203ENST00000368021 USP16Q9Y5T5 823 aa15.18■□□□□ 0.02
USF1-203ENST00000368021 RGPD3A6NKT7 1758 aaPredicted RBP15.18■□□□□ 0.02
USF1-203ENST00000368021 RGPD4Q7Z3J3 1758 aa15.18■□□□□ 0.02
USF1-203ENST00000368021 PROSER3Q2NL68 480 aa15.17■□□□□ 0.02
USF1-203ENST00000368021 SLC4A10Q6U841 1118 aa15.17■□□□□ 0.02
USF1-203ENST00000368021 SLC4A9Q96Q91 983 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms