RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 USPL1Q5W0Q7 1092 aa11□□□□□ -0.65
RNU4-59P-201ENST00000364447 VSIG10Q8N0Z9 540 aa11□□□□□ -0.65
RNU4-59P-201ENST00000364447 GAS2L2Q8NHY3 880 aa11□□□□□ -0.65
RNU4-59P-201ENST00000364447 CFAP53Q96M91 514 aa11□□□□□ -0.65
RNU4-59P-201ENST00000364447 GNAT3A8MTJ3 354 aa10.99□□□□□ -0.65
RNU4-59P-201ENST00000364447 POLRMTO00411 1230 aaKnown RBP10.99□□□□□ -0.65
RNU4-59P-201ENST00000364447 DALRD3Q5D0E6 543 aaKnown RBP10.99□□□□□ -0.65
RNU4-59P-201ENST00000364447 ZBTB1Q9Y2K1 713 aa10.99□□□□□ -0.65
RNU4-59P-201ENST00000364447 DLEC1Q9Y238 1755 aa10.98□□□□□ -0.65
RNU4-59P-201ENST00000364447 STARD3NLO95772 234 aa10.98□□□□□ -0.65
RNU4-59P-201ENST00000364447 KCNA3P22001 575 aa10.98□□□□□ -0.65
RNU4-59P-201ENST00000364447 CANXP27824 592 aaKnown RBP10.98□□□□□ -0.65
RNU4-59P-201ENST00000364447 TM4SF1P30408 202 aa10.98□□□□□ -0.65
RNU4-59P-201ENST00000364447 PIAS4Q8N2W9 510 aaPredicted RBP10.98□□□□□ -0.65
RNU4-59P-201ENST00000364447 NARFQ9UHQ1 456 aa10.98□□□□□ -0.65
RNU4-59P-201ENST00000364447 NRXN2Q9P2S2 1712 aa10.98□□□□□ -0.65
RNU4-59P-201ENST00000364447 HSPA6P17066 643 aa10.97□□□□□ -0.65
RNU4-59P-201ENST00000364447 CHRNA5P30532 468 aa10.97□□□□□ -0.65
RNU4-59P-201ENST00000364447 NFIXQ14938 502 aa10.97□□□□□ -0.65
RNU4-59P-201ENST00000364447 SCN7AQ01118 1682 aa10.97□□□□□ -0.65
RNU4-59P-201ENST00000364447 HEG1Q9ULI3 1381 aa10.96□□□□□ -0.65
RNU4-59P-201ENST00000364447 KIF3CO14782 793 aa10.96□□□□□ -0.65
RNU4-59P-201ENST00000364447 PRKAR2BP31323 418 aa10.96□□□□□ -0.65
RNU4-59P-201ENST00000364447 C9orf131Q5VYM1 1079 aa10.96□□□□□ -0.65
RNU4-59P-201ENST00000364447 ZNF790Q6PG37 636 aa10.96□□□□□ -0.65
RNU4-59P-201ENST00000364447 NUDCQ9Y266 331 aa10.96□□□□□ -0.65
RNU4-59P-201ENST00000364447 ZNF330Q9Y3S2 320 aaPredicted RBP10.96□□□□□ -0.65
RNU4-59P-201ENST00000364447 SBF1O95248 1867 aa10.95□□□□□ -0.66
RNU4-59P-201ENST00000364447 A0A087WZG4 1122 aa10.95□□□□□ -0.66
RNU4-59P-201ENST00000364447 SERPINB2P05120 415 aa10.95□□□□□ -0.66
RNU4-59P-201ENST00000364447 NPM2Q86SE8 214 aaKnown RBP10.95□□□□□ -0.66
RNU4-59P-201ENST00000364447 IL17REQ8NFR9 667 aa10.95□□□□□ -0.66
RNU4-59P-201ENST00000364447 ZNF496Q96IT1 587 aaPredicted RBP10.95□□□□□ -0.66
RNU4-59P-201ENST00000364447 TEX13AQ9BXU3 409 aaPredicted RBP10.95□□□□□ -0.66
RNU4-59P-201ENST00000364447 RNF181Q9P0P0 153 aa10.95□□□□□ -0.66
RNU4-59P-201ENST00000364447 CEMIPQ8WUJ3 1361 aa10.94□□□□□ -0.66
RNU4-59P-201ENST00000364447 BICDL1Q6ZP65 573 aa10.94□□□□□ -0.66
RNU4-59P-201ENST00000364447 FMNL2Q96PY5 1086 aa10.94□□□□□ -0.66
RNU4-59P-201ENST00000364447 BCL2L12Q9HB09 334 aa10.94□□□□□ -0.66
RNU4-59P-201ENST00000364447 TNRC6CQ9HCJ0 1690 aaKnown RBP10.94□□□□□ -0.66
RNU4-59P-201ENST00000364447 BCORQ6W2J9 1755 aa10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 KDM2BQ8NHM5 1336 aa10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 BTBD11A6QL63 1104 aa10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 TOMM70O94826 608 aa10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 U2AF1L5P0DN76 240 aaPredicted RBP10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 EIF5P55010 431 aaKnown RBP10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 U2AF1Q01081 240 aaKnown RBP eCLIP10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 C16orf71Q8IYS4 520 aaPredicted RBP10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 PHACTR3Q96KR7 559 aa10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 RSPH6AQ9H0K4 717 aa10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 NMRK2Q9NPI5 230 aa10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 ANKRD31Q8N7Z5 1873 aa10.93□□□□□ -0.66
RNU4-59P-201ENST00000364447 TIAM2Q8IVF5 1701 aa10.92□□□□□ -0.66
RNU4-59P-201ENST00000364447 CCDC88AQ3V6T2 1871 aa10.92□□□□□ -0.66
RNU4-59P-201ENST00000364447 H0YIN7 160 aa10.92□□□□□ -0.66
RNU4-59P-201ENST00000364447 NPHP1O15259 732 aa10.92□□□□□ -0.66
RNU4-59P-201ENST00000364447 PPP2R1AP30153 589 aa10.92□□□□□ -0.66
RNU4-59P-201ENST00000364447 C2CD5Q86YS7 1000 aa10.92□□□□□ -0.66
RNU4-59P-201ENST00000364447 CACNA1SQ13698 1873 aa10.91□□□□□ -0.66
RNU4-59P-201ENST00000364447 CARMIL3Q8ND23 1372 aa10.91□□□□□ -0.66
RNU4-59P-201ENST00000364447 IL6STP40189 918 aaPredicted RBP10.91□□□□□ -0.66
RNU4-59P-201ENST00000364447 RASSF7Q02833 373 aa10.91□□□□□ -0.66
RNU4-59P-201ENST00000364447 TBC1D9BQ66K14 1250 aa10.91□□□□□ -0.66
RNU4-59P-201ENST00000364447 TTLL6Q8N841 843 aa10.91□□□□□ -0.66
RNU4-59P-201ENST00000364447 TBC1D2BQ9UPU7 963 aa10.91□□□□□ -0.66
RNU4-59P-201ENST00000364447 COL11A2P13942 1736 aaPredicted RBP10.91□□□□□ -0.66
RNU4-59P-201ENST00000364447 CEP350Q5VT06 3117 aa10.9□□□□□ -0.66
RNU4-59P-201ENST00000364447 A1BGP04217 495 aa10.9□□□□□ -0.66
RNU4-59P-201ENST00000364447 APLP1P51693 650 aa10.9□□□□□ -0.66
RNU4-59P-201ENST00000364447 MCM10Q7L590 875 aa10.9□□□□□ -0.66
RNU4-59P-201ENST00000364447 DLG5Q8TDM6 1919 aa10.9□□□□□ -0.67
RNU4-59P-201ENST00000364447 WDR90Q96KV7 1748 aa10.89□□□□□ -0.67
RNU4-59P-201ENST00000364447 ZC3H4Q9UPT8 1303 aaKnown RBP10.89□□□□□ -0.67
RNU4-59P-201ENST00000364447 KCNQ3O43525 872 aa10.89□□□□□ -0.67
RNU4-59P-201ENST00000364447 NEFMP07197 916 aa10.89□□□□□ -0.67
RNU4-59P-201ENST00000364447 LMNB1P20700 586 aa10.89□□□□□ -0.67
RNU4-59P-201ENST00000364447 PDE6BP35913 854 aa10.89□□□□□ -0.67
RNU4-59P-201ENST00000364447 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
RNU4-59P-201ENST00000364447 RBM46Q8TBY0 533 aaKnown RBP10.89□□□□□ -0.67
RNU4-59P-201ENST00000364447 ZNF622Q969S3 477 aaKnown RBP eCLIP10.89□□□□□ -0.67
RNU4-59P-201ENST00000364447 SETDB2Q96T68 719 aa10.89□□□□□ -0.67
RNU4-59P-201ENST00000364447 PDZRN3Q9UPQ7 1066 aa10.89□□□□□ -0.67
RNU4-59P-201ENST00000364447 LAMB4A4D0S4 1761 aa10.89□□□□□ -0.67
RNU4-59P-201ENST00000364447 SNRPA1P09661 255 aaKnown RBP10.88□□□□□ -0.67
RNU4-59P-201ENST00000364447 ST5P78524 1137 aa10.88□□□□□ -0.67
RNU4-59P-201ENST00000364447 PRR5LQ6MZQ0 368 aa10.88□□□□□ -0.67
RNU4-59P-201ENST00000364447 CNBD1Q8NA66 436 aa10.88□□□□□ -0.67
RNU4-59P-201ENST00000364447 BRIP1Q9BX63 1249 aa10.88□□□□□ -0.67
RNU4-59P-201ENST00000364447 USP16Q9Y5T5 823 aa10.88□□□□□ -0.67
RNU4-59P-201ENST00000364447 ARFGEF2Q9Y6D5 1785 aa10.88□□□□□ -0.67
RNU4-59P-201ENST00000364447 FER1L6Q2WGJ9 1857 aa10.87□□□□□ -0.67
RNU4-59P-201ENST00000364447 HTATSF1O43719 755 aaKnown RBP10.87□□□□□ -0.67
RNU4-59P-201ENST00000364447 CAMTA2O94983 1202 aa10.87□□□□□ -0.67
RNU4-59P-201ENST00000364447 PIP4K2AP48426 406 aaPredicted RBP10.87□□□□□ -0.67
RNU4-59P-201ENST00000364447 DCTN1Q14203 1278 aa10.87□□□□□ -0.67
RNU4-59P-201ENST00000364447 CCDC24Q8N4L8 307 aa10.87□□□□□ -0.67
RNU4-59P-201ENST00000364447 RRAGCQ9HB90 399 aa10.87□□□□□ -0.67
RNU4-59P-201ENST00000364447 ZNF219Q9P2Y4 722 aaPredicted RBP10.87□□□□□ -0.67
RNU4-59P-201ENST00000364447 ZNF652Q9Y2D9 606 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 206.9 ms