RNA–Protein interactions for RNA: ENST00000362025.9

RAB3IP-202, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-202ENST00000362025 RSPH6AQ9H0K4 717 aa22.68■■□□□ 1.22
RAB3IP-202ENST00000362025 GPBP1L1Q9HC44 474 aaPredicted RBP22.68■■□□□ 1.22
RAB3IP-202ENST00000362025 TM4SF1P30408 202 aa22.67■■□□□ 1.22
RAB3IP-202ENST00000362025 COL15A1P39059 1388 aa22.67■■□□□ 1.22
RAB3IP-202ENST00000362025 POLRMTO00411 1230 aaKnown RBP22.67■■□□□ 1.22
RAB3IP-202ENST00000362025 KCNA3P22001 575 aa22.67■■□□□ 1.22
RAB3IP-202ENST00000362025 CANXP27824 592 aaKnown RBP22.67■■□□□ 1.22
RAB3IP-202ENST00000362025 ZNF496Q96IT1 587 aaPredicted RBP22.67■■□□□ 1.22
RAB3IP-202ENST00000362025 FCHSD2O94868 740 aa22.66■■□□□ 1.22
RAB3IP-202ENST00000362025 NARFQ9UHQ1 456 aa22.66■■□□□ 1.22
RAB3IP-202ENST00000362025 NUDCQ9Y266 331 aa22.66■■□□□ 1.22
RAB3IP-202ENST00000362025 ZNF790Q6PG37 636 aa22.66■■□□□ 1.22
RAB3IP-202ENST00000362025 U2AF1L5P0DN76 240 aaPredicted RBP22.65■■□□□ 1.22
RAB3IP-202ENST00000362025 U2AF1Q01081 240 aaKnown RBP eCLIP22.65■■□□□ 1.22
RAB3IP-202ENST00000362025 ARHGAP27Q6ZUM4 889 aa22.65■■□□□ 1.22
RAB3IP-202ENST00000362025 UBR2Q8IWV8 1755 aa22.64■■□□□ 1.21
RAB3IP-202ENST00000362025 STARD3NLO95772 234 aa22.64■■□□□ 1.21
RAB3IP-202ENST00000362025 NFIXQ14938 502 aa22.64■■□□□ 1.21
RAB3IP-202ENST00000362025 BCL2L12Q9HB09 334 aa22.63■■□□□ 1.21
RAB3IP-202ENST00000362025 PIM2Q9P1W9 311 aa22.63■■□□□ 1.21
RAB3IP-202ENST00000362025 CEMIPQ8WUJ3 1361 aa22.63■■□□□ 1.21
RAB3IP-202ENST00000362025 HEG1Q9ULI3 1381 aa22.63■■□□□ 1.21
RAB3IP-202ENST00000362025 CHRNA5P30532 468 aa22.62■■□□□ 1.21
RAB3IP-202ENST00000362025 KCNQ3O43525 872 aa22.61■■□□□ 1.21
RAB3IP-202ENST00000362025 EIF5P55010 431 aaKnown RBP22.6■■□□□ 1.21
RAB3IP-202ENST00000362025 DALRD3Q5D0E6 543 aaKnown RBP22.6■■□□□ 1.21
RAB3IP-202ENST00000362025 BTBD11A6QL63 1104 aa22.59■■□□□ 1.21
RAB3IP-202ENST00000362025 FMNL2Q96PY5 1086 aa22.59■■□□□ 1.21
RAB3IP-202ENST00000362025 TEX13AQ9BXU3 409 aaPredicted RBP22.59■■□□□ 1.21
RAB3IP-202ENST00000362025 ZNF330Q9Y3S2 320 aaPredicted RBP22.58■■□□□ 1.21
RAB3IP-202ENST00000362025 SIPA1L3O60292 1781 aaPredicted RBP22.58■■□□□ 1.21
RAB3IP-202ENST00000362025 BRCA1P38398 1863 aaKnown RBP22.58■■□□□ 1.2
RAB3IP-202ENST00000362025 A0A087WZG4 1122 aa22.58■■□□□ 1.2
RAB3IP-202ENST00000362025 SERPINB2P05120 415 aa22.58■■□□□ 1.2
RAB3IP-202ENST00000362025 MCM10Q7L590 875 aa22.58■■□□□ 1.2
RAB3IP-202ENST00000362025 BICDL1Q6ZP65 573 aa22.57■■□□□ 1.2
RAB3IP-202ENST00000362025 RTF1Q92541 710 aaKnown RBP22.56■■□□□ 1.2
RAB3IP-202ENST00000362025 A1BGP04217 495 aa22.56■■□□□ 1.2
RAB3IP-202ENST00000362025 TBC1D2BQ9UPU7 963 aa22.56■■□□□ 1.2
RAB3IP-202ENST00000362025 DCTN1Q14203 1278 aa22.54■■□□□ 1.2
RAB3IP-202ENST00000362025 C9orf131Q5VYM1 1079 aa22.54■■□□□ 1.2
RAB3IP-202ENST00000362025 KIF3CO14782 793 aa22.53■■□□□ 1.2
RAB3IP-202ENST00000362025 IL6STP40189 918 aaPredicted RBP22.53■■□□□ 1.2
RAB3IP-202ENST00000362025 TBC1D9BQ66K14 1250 aa22.53■■□□□ 1.2
RAB3IP-202ENST00000362025 USP16Q9Y5T5 823 aa22.52■■□□□ 1.2
RAB3IP-202ENST00000362025 AFDNP55196 1824 aaKnown RBP22.52■■□□□ 1.19
RAB3IP-202ENST00000362025 PRAMEF22A3QJZ6 481 aa22.51■■□□□ 1.19
RAB3IP-202ENST00000362025 CARMIL3Q8ND23 1372 aa22.51■■□□□ 1.19
RAB3IP-202ENST00000362025 ARFGEF1Q9Y6D6 1849 aa22.51■■□□□ 1.19
RAB3IP-202ENST00000362025 NRXN2Q9P2S2 1712 aa22.51■■□□□ 1.19
RAB3IP-202ENST00000362025 PIP4K2AP48426 406 aaPredicted RBP22.5■■□□□ 1.19
RAB3IP-202ENST00000362025 NPM2Q86SE8 214 aaKnown RBP22.5■■□□□ 1.19
RAB3IP-202ENST00000362025 C2CD5Q86YS7 1000 aa22.5■■□□□ 1.19
RAB3IP-202ENST00000362025 HTATSF1O43719 755 aaKnown RBP22.5■■□□□ 1.19
RAB3IP-202ENST00000362025 RNF181Q9P0P0 153 aa22.48■■□□□ 1.19
RAB3IP-202ENST00000362025 CAMTA2O94983 1202 aa22.48■■□□□ 1.19
RAB3IP-202ENST00000362025 SNRPA1P09661 255 aaKnown RBP22.48■■□□□ 1.19
RAB3IP-202ENST00000362025 CCDC24Q8N4L8 307 aa22.48■■□□□ 1.19
RAB3IP-202ENST00000362025 NMRK2Q9NPI5 230 aa22.47■■□□□ 1.19
RAB3IP-202ENST00000362025 SCN7AQ01118 1682 aa22.46■■□□□ 1.19
RAB3IP-202ENST00000362025 H0YIN7 160 aa22.46■■□□□ 1.19
RAB3IP-202ENST00000362025 DZIP3Q86Y13 1208 aaKnown RBP22.46■■□□□ 1.19
RAB3IP-202ENST00000362025 TTLL6Q8N841 843 aa22.46■■□□□ 1.19
RAB3IP-202ENST00000362025 MIS18AQ9NYP9 233 aa22.46■■□□□ 1.19
RAB3IP-202ENST00000362025 NEFMP07197 916 aa22.45■■□□□ 1.18
RAB3IP-202ENST00000362025 HSPA6P17066 643 aa22.45■■□□□ 1.18
RAB3IP-202ENST00000362025 RASSF7Q02833 373 aa22.45■■□□□ 1.18
RAB3IP-202ENST00000362025 TAF7Q15545 349 aaPredicted RBP22.45■■□□□ 1.18
RAB3IP-202ENST00000362025 PRR5LQ6MZQ0 368 aa22.45■■□□□ 1.18
RAB3IP-202ENST00000362025 SETDB2Q96T68 719 aa22.45■■□□□ 1.18
RAB3IP-202ENST00000362025 PLEKHF1Q96S99 279 aa22.43■■□□□ 1.18
RAB3IP-202ENST00000362025 BRIP1Q9BX63 1249 aa22.43■■□□□ 1.18
RAB3IP-202ENST00000362025 NBPF26B4DH59 902 aa22.42■■□□□ 1.18
RAB3IP-202ENST00000362025 NBPF10Q6P3W6 841 aaKnown RBP22.42■■□□□ 1.18
RAB3IP-202ENST00000362025 NBPF15Q8N660 670 aa22.42■■□□□ 1.18
RAB3IP-202ENST00000362025 ZNF622Q969S3 477 aaKnown RBP eCLIP22.42■■□□□ 1.18
RAB3IP-202ENST00000362025 PDE6BP35913 854 aa22.42■■□□□ 1.18
RAB3IP-202ENST00000362025 CNBD1Q8NA66 436 aa22.42■■□□□ 1.18
RAB3IP-202ENST00000362025 NPHP1O15259 732 aa22.41■■□□□ 1.18
RAB3IP-202ENST00000362025 TOMM70O94826 608 aa22.41■■□□□ 1.18
RAB3IP-202ENST00000362025 DLEC1Q9Y238 1755 aa22.4■■□□□ 1.18
RAB3IP-202ENST00000362025 NFE2L2Q16236 605 aa22.4■■□□□ 1.18
RAB3IP-202ENST00000362025 PRELPP51888 382 aa22.4■■□□□ 1.18
RAB3IP-202ENST00000362025 THUMPD2Q9BTF0 503 aaKnown RBP22.4■■□□□ 1.18
RAB3IP-202ENST00000362025 KDM2BQ8NHM5 1336 aa22.39■■□□□ 1.17
RAB3IP-202ENST00000362025 ZNF219Q9P2Y4 722 aaPredicted RBP22.38■■□□□ 1.17
RAB3IP-202ENST00000362025 PDZRN3Q9UPQ7 1066 aa22.38■■□□□ 1.17
RAB3IP-202ENST00000362025 ANKRD31Q8N7Z5 1873 aa22.38■■□□□ 1.17
RAB3IP-202ENST00000362025 LMNB1P20700 586 aa22.38■■□□□ 1.17
RAB3IP-202ENST00000362025 ST5P78524 1137 aa22.38■■□□□ 1.17
RAB3IP-202ENST00000362025 CLEC4GQ6UXB4 293 aa22.38■■□□□ 1.17
RAB3IP-202ENST00000362025 MAPK8IP3Q9UPT6 1336 aa22.37■■□□□ 1.17
RAB3IP-202ENST00000362025 PNISRQ8TF01 805 aaKnown RBP22.37■■□□□ 1.17
RAB3IP-202ENST00000362025 ZNF652Q9Y2D9 606 aa22.37■■□□□ 1.17
RAB3IP-202ENST00000362025 BCORQ6W2J9 1755 aa22.37■■□□□ 1.17
RAB3IP-202ENST00000362025 NFKBIEO00221 500 aa22.37■■□□□ 1.17
RAB3IP-202ENST00000362025 C21orf2O43822 256 aa22.36■■□□□ 1.17
RAB3IP-202ENST00000362025 NBPF5PQ86XG9 351 aaPredicted RBP22.36■■□□□ 1.17
RAB3IP-202ENST00000362025 PNNQ9H307 717 aaKnown RBP22.36■■□□□ 1.17
RAB3IP-202ENST00000362025 RRAGCQ9HB90 399 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms