RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.3■□□□□ 0.68
SCAF1-201ENST00000360565 IPO7O95373 1038 aaKnown RBP19.3■□□□□ 0.68
SCAF1-201ENST00000360565 MNS1Q8NEH6 495 aa19.3■□□□□ 0.68
SCAF1-201ENST00000360565 MAP3K19Q56UN5 1328 aa19.3■□□□□ 0.68
SCAF1-201ENST00000360565 STX6O43752 255 aa19.3■□□□□ 0.68
SCAF1-201ENST00000360565 JMYQ8N9B5 988 aa19.3■□□□□ 0.68
SCAF1-201ENST00000360565 MTERF4Q7Z6M4 381 aaKnown RBP19.3■□□□□ 0.68
SCAF1-201ENST00000360565 JARID2Q92833 1246 aaPredicted RBP19.3■□□□□ 0.68
SCAF1-201ENST00000360565 IDH1O75874 414 aaKnown RBP19.29■□□□□ 0.68
SCAF1-201ENST00000360565 OTUD7AQ8TE49 926 aaPredicted RBP19.29■□□□□ 0.68
SCAF1-201ENST00000360565 ATP5J2-PTCD1G3V325 749 aa19.29■□□□□ 0.68
SCAF1-201ENST00000360565 G2E3Q7L622 706 aa19.29■□□□□ 0.68
SCAF1-201ENST00000360565 MPHOSPH8Q99549 860 aa19.29■□□□□ 0.68
SCAF1-201ENST00000360565 USP25Q9UHP3 1055 aa19.29■□□□□ 0.68
SCAF1-201ENST00000360565 UBE3BQ7Z3V4 1068 aa19.29■□□□□ 0.68
SCAF1-201ENST00000360565 FILIP1Q7Z7B0 1213 aa19.29■□□□□ 0.68
SCAF1-201ENST00000360565 SCAND2PQ9GZW5 306 aaPredicted RBP19.29■□□□□ 0.68
SCAF1-201ENST00000360565 TRMT2AQ8IZ69 625 aaKnown RBP19.29■□□□□ 0.68
SCAF1-201ENST00000360565 TFIP11Q9UBB9 837 aaKnown RBP19.29■□□□□ 0.68
SCAF1-201ENST00000360565 ZNF521Q96K83 1311 aa19.28■□□□□ 0.68
SCAF1-201ENST00000360565 UQCRHLA0A096LP55 91 aa19.28■□□□□ 0.68
SCAF1-201ENST00000360565 UQCRHP07919 91 aa19.28■□□□□ 0.68
SCAF1-201ENST00000360565 IFIT1P09914 478 aaKnown RBP19.28■□□□□ 0.68
SCAF1-201ENST00000360565 ANKRD24Q8TF21 1146 aa19.28■□□□□ 0.68
SCAF1-201ENST00000360565 U3KPZ7 1027 aaPredicted RBP19.28■□□□□ 0.68
SCAF1-201ENST00000360565 ATP10AO60312 1499 aa19.28■□□□□ 0.68
SCAF1-201ENST00000360565 ABCA8O94911 1581 aa19.28■□□□□ 0.68
SCAF1-201ENST00000360565 FLT4P35916 1363 aa19.28■□□□□ 0.68
SCAF1-201ENST00000360565 CCDC47Q96A33 483 aaKnown RBP19.28■□□□□ 0.68
SCAF1-201ENST00000360565 BRMS1Q9HCU9 246 aa19.28■□□□□ 0.68
SCAF1-201ENST00000360565 RAB3GAP1Q15042 981 aa19.28■□□□□ 0.68
SCAF1-201ENST00000360565 ZNF771Q7L3S4 317 aaPredicted RBP19.28■□□□□ 0.68
SCAF1-201ENST00000360565 KRT28Q7Z3Y7 464 aa19.28■□□□□ 0.68
SCAF1-201ENST00000360565 GJB2P29033 226 aa19.27■□□□□ 0.68
SCAF1-201ENST00000360565 NOC3LQ8WTT2 800 aaKnown RBP19.27■□□□□ 0.68
SCAF1-201ENST00000360565 ZSCAN23Q3MJ62 389 aa19.27■□□□□ 0.68
SCAF1-201ENST00000360565 ZGPATQ8N5A5 531 aaKnown RBP19.27■□□□□ 0.68
SCAF1-201ENST00000360565 RBM25P49756 843 aaKnown RBP19.26■□□□□ 0.67
SCAF1-201ENST00000360565 SBNO2Q9Y2G9 1366 aa19.26■□□□□ 0.67
SCAF1-201ENST00000360565 IMMTQ16891 758 aaKnown RBP19.26■□□□□ 0.67
SCAF1-201ENST00000360565 ZSCAN25Q6NSZ9 544 aa19.26■□□□□ 0.67
SCAF1-201ENST00000360565 TRIM22Q8IYM9 498 aa19.26■□□□□ 0.67
SCAF1-201ENST00000360565 TCEANC2Q96MN5 208 aa19.26■□□□□ 0.67
SCAF1-201ENST00000360565 NACAP1Q9BZK3 213 aa19.26■□□□□ 0.67
SCAF1-201ENST00000360565 PLA2R1Q13018 1463 aa19.25■□□□□ 0.67
SCAF1-201ENST00000360565 GUCY1B3Q02153 619 aa19.25■□□□□ 0.67
SCAF1-201ENST00000360565 METTL24Q5JXM2 366 aa19.25■□□□□ 0.67
SCAF1-201ENST00000360565 CKAP2LQ8IYA6 745 aa19.25■□□□□ 0.67
SCAF1-201ENST00000360565 CEP57L1Q8IYX8 460 aa19.25■□□□□ 0.67
SCAF1-201ENST00000360565 USP26Q9BXU7 913 aa19.25■□□□□ 0.67
SCAF1-201ENST00000360565 A0A0U1RQG5 324 aaPredicted RBP19.25■□□□□ 0.67
SCAF1-201ENST00000360565 ZBTB3Q9H5J0 574 aa19.25■□□□□ 0.67
SCAF1-201ENST00000360565 ANAPC15P60006 121 aa19.25■□□□□ 0.67
SCAF1-201ENST00000360565 SAMD9LQ8IVG5 1584 aa19.25■□□□□ 0.67
SCAF1-201ENST00000360565 SLC39A6Q13433 755 aa19.24■□□□□ 0.67
SCAF1-201ENST00000360565 NUP133Q8WUM0 1156 aa19.24■□□□□ 0.67
SCAF1-201ENST00000360565 SERPINC1P01008 464 aa19.24■□□□□ 0.67
SCAF1-201ENST00000360565 LRRC59Q96AG4 307 aaKnown RBP19.24■□□□□ 0.67
SCAF1-201ENST00000360565 NECAB1Q8N987 351 aa19.24■□□□□ 0.67
SCAF1-201ENST00000360565 CHL1O00533 1208 aa19.23■□□□□ 0.67
SCAF1-201ENST00000360565 PA2G4Q9UQ80 394 aaKnown RBP19.23■□□□□ 0.67
SCAF1-201ENST00000360565 CHRNA2Q15822 529 aa19.23■□□□□ 0.67
SCAF1-201ENST00000360565 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
SCAF1-201ENST00000360565 IFNL2Q8IZJ0 200 aa19.23■□□□□ 0.67
SCAF1-201ENST00000360565 CCDC69A6NI79 296 aa19.23■□□□□ 0.67
SCAF1-201ENST00000360565 ANKRD13DQ6ZTN6 518 aa19.22■□□□□ 0.67
SCAF1-201ENST00000360565 PHAXQ9H814 394 aaKnown RBP19.22■□□□□ 0.67
SCAF1-201ENST00000360565 MSH6P52701 1360 aa19.22■□□□□ 0.67
SCAF1-201ENST00000360565 STARD3NLO95772 234 aa19.22■□□□□ 0.67
SCAF1-201ENST00000360565 GOLIM4O00461 696 aa19.22■□□□□ 0.67
SCAF1-201ENST00000360565 CCT2P78371 535 aaKnown RBP19.22■□□□□ 0.67
SCAF1-201ENST00000360565 PPFIA3O75145 1194 aa19.21■□□□□ 0.67
SCAF1-201ENST00000360565 ERVK-7P63135 1459 aa19.21■□□□□ 0.67
SCAF1-201ENST00000360565 TDO2P48775 406 aa19.21■□□□□ 0.67
SCAF1-201ENST00000360565 COPS6Q7L5N1 327 aa19.21■□□□□ 0.67
SCAF1-201ENST00000360565 AKAP2Q9Y2D5 859 aa19.21■□□□□ 0.67
SCAF1-201ENST00000360565 ZMYM3Q14202 1370 aa19.21■□□□□ 0.67
SCAF1-201ENST00000360565 GRM8O00222 908 aa19.21■□□□□ 0.67
SCAF1-201ENST00000360565 GPS2Q13227 327 aa19.21■□□□□ 0.67
SCAF1-201ENST00000360565 CCDC112Q8NEF3 446 aa19.21■□□□□ 0.67
SCAF1-201ENST00000360565 SNRKQ9NRH2 765 aa19.21■□□□□ 0.67
SCAF1-201ENST00000360565 GNL3LQ9NVN8 582 aaKnown RBP19.21■□□□□ 0.67
SCAF1-201ENST00000360565 ARGLU1Q9NWB6 273 aaPredicted RBP19.21■□□□□ 0.67
SCAF1-201ENST00000360565 HCLS1P14317 486 aaPredicted RBP19.21■□□□□ 0.67
SCAF1-201ENST00000360565 BRPF1P55201 1214 aaPredicted RBP19.21■□□□□ 0.67
SCAF1-201ENST00000360565 XAGE3Q8WTP9 111 aa19.21■□□□□ 0.67
SCAF1-201ENST00000360565 EDC4Q6P2E9 1401 aaKnown RBP19.2■□□□□ 0.66
SCAF1-201ENST00000360565 CDKL5O76039 1030 aa19.2■□□□□ 0.66
SCAF1-201ENST00000360565 KSR2Q6VAB6 950 aa19.2■□□□□ 0.66
SCAF1-201ENST00000360565 CHMLP26374 656 aa19.2■□□□□ 0.66
SCAF1-201ENST00000360565 UBE2HP62256 183 aa19.2■□□□□ 0.66
SCAF1-201ENST00000360565 AIDAQ96BJ3 306 aa19.2■□□□□ 0.66
SCAF1-201ENST00000360565 ZSCAN22P10073 491 aaPredicted RBP19.2■□□□□ 0.66
SCAF1-201ENST00000360565 TMOD3Q9NYL9 352 aa19.2■□□□□ 0.66
SCAF1-201ENST00000360565 TNNT3P45378 269 aaPredicted RBP19.19■□□□□ 0.66
SCAF1-201ENST00000360565 IFIT5Q13325 482 aaKnown RBP19.19■□□□□ 0.66
SCAF1-201ENST00000360565 LRSAM1Q6UWE0 723 aa19.19■□□□□ 0.66
SCAF1-201ENST00000360565 RBM8AQ9Y5S9 174 aaKnown RBP19.19■□□□□ 0.66
SCAF1-201ENST00000360565 ALDH1L1O75891 902 aa19.19■□□□□ 0.66
SCAF1-201ENST00000360565 AKAP4Q5JQC9 854 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms