RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 KCNQ3O43525 872 aa18.46■□□□□ 0.55
GABPB1-202ENST00000359031 TBC1D2Q9BYX2 928 aa18.46■□□□□ 0.55
GABPB1-202ENST00000359031 CHPF2Q9P2E5 772 aa18.46■□□□□ 0.55
GABPB1-202ENST00000359031 KDM6AO15550 1401 aaPredicted RBP18.46■□□□□ 0.55
GABPB1-202ENST00000359031 C5P01031 1676 aa18.45■□□□□ 0.54
GABPB1-202ENST00000359031 EIF2S2P20042 333 aaKnown RBP18.45■□□□□ 0.54
GABPB1-202ENST00000359031 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
GABPB1-202ENST00000359031 PHAXQ9H814 394 aaKnown RBP18.45■□□□□ 0.54
GABPB1-202ENST00000359031 NLRP2Q9NX02 1062 aa18.45■□□□□ 0.54
GABPB1-202ENST00000359031 SPG7Q9UQ90 795 aa18.45■□□□□ 0.54
GABPB1-202ENST00000359031 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
GABPB1-202ENST00000359031 DBF4Q9UBU7 674 aaPredicted RBP18.45■□□□□ 0.54
GABPB1-202ENST00000359031 SRCAPQ6ZRS2 3230 aa18.44■□□□□ 0.54
GABPB1-202ENST00000359031 UBTFL1P0CB47 393 aaPredicted RBP18.44■□□□□ 0.54
GABPB1-202ENST00000359031 GJD4Q96KN9 370 aaPredicted RBP18.44■□□□□ 0.54
GABPB1-202ENST00000359031 BCL9LQ86UU0 1499 aa18.43■□□□□ 0.54
GABPB1-202ENST00000359031 GIGYF1O75420 1035 aaPredicted RBP18.43■□□□□ 0.54
GABPB1-202ENST00000359031 DNAAF4Q8WXU2 420 aa18.43■□□□□ 0.54
GABPB1-202ENST00000359031 USP44Q9H0E7 712 aa18.43■□□□□ 0.54
GABPB1-202ENST00000359031 OSBPL3Q9H4L5 887 aa18.43■□□□□ 0.54
GABPB1-202ENST00000359031 LRRFIP2Q9Y608 721 aaKnown RBP18.43■□□□□ 0.54
GABPB1-202ENST00000359031 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
GABPB1-202ENST00000359031 CSB-PGBD3P0DP91 1061 aa18.42■□□□□ 0.54
GABPB1-202ENST00000359031 NFKBIBQ15653 356 aa18.42■□□□□ 0.54
GABPB1-202ENST00000359031 ADCY9O60503 1353 aa18.42■□□□□ 0.54
GABPB1-202ENST00000359031 SMARCA5O60264 1052 aaPredicted RBP18.41■□□□□ 0.54
GABPB1-202ENST00000359031 PHKG2P15735 406 aa18.41■□□□□ 0.54
GABPB1-202ENST00000359031 C16orf71Q8IYS4 520 aaPredicted RBP18.41■□□□□ 0.54
GABPB1-202ENST00000359031 LAMB4A4D0S4 1761 aa18.41■□□□□ 0.54
GABPB1-202ENST00000359031 BEND3Q5T5X7 828 aa18.41■□□□□ 0.54
GABPB1-202ENST00000359031 CABLES1Q8TDN4 633 aa18.41■□□□□ 0.54
GABPB1-202ENST00000359031 OTUD7AQ8TE49 926 aaPredicted RBP18.41■□□□□ 0.54
GABPB1-202ENST00000359031 CASC1Q6TDU7 716 aa18.4■□□□□ 0.54
GABPB1-202ENST00000359031 HSCBQ8IWL3 235 aa18.4■□□□□ 0.54
GABPB1-202ENST00000359031 IFNL2Q8IZJ0 200 aa18.4■□□□□ 0.54
GABPB1-202ENST00000359031 SNX21Q969T3 373 aa18.4■□□□□ 0.54
GABPB1-202ENST00000359031 LRRCC1Q9C099 1032 aa18.4■□□□□ 0.54
GABPB1-202ENST00000359031 SLC52A2Q9HAB3 445 aa18.4■□□□□ 0.54
GABPB1-202ENST00000359031 PNMA6EA0A0J9YXQ4 647 aa18.39■□□□□ 0.53
GABPB1-202ENST00000359031 APBB1O00213 710 aa18.39■□□□□ 0.53
GABPB1-202ENST00000359031 SF3B2Q13435 895 aaKnown RBP18.39■□□□□ 0.53
GABPB1-202ENST00000359031 SSH3Q8TE77 659 aa18.39■□□□□ 0.53
GABPB1-202ENST00000359031 HYPKQ9NX55 129 aa18.39■□□□□ 0.53
GABPB1-202ENST00000359031 SALL3Q9BXA9 1300 aa18.38■□□□□ 0.53
GABPB1-202ENST00000359031 PI4KAP2A4QPH2 592 aa18.38■□□□□ 0.53
GABPB1-202ENST00000359031 HSP90AB1P08238 724 aaKnown RBP18.38■□□□□ 0.53
GABPB1-202ENST00000359031 CHRNA2Q15822 529 aa18.38■□□□□ 0.53
GABPB1-202ENST00000359031 PI4KAP1Q8N8J0 262 aa18.38■□□□□ 0.53
GABPB1-202ENST00000359031 ANTXR1Q9H6X2 564 aa18.38■□□□□ 0.53
GABPB1-202ENST00000359031 EXOC6BQ9Y2D4 811 aa18.38■□□□□ 0.53
GABPB1-202ENST00000359031 ALDH1L1O75891 902 aa18.38■□□□□ 0.53
GABPB1-202ENST00000359031 UNC5CLQ8IV45 518 aa18.38■□□□□ 0.53
GABPB1-202ENST00000359031 SDSP20132 328 aa18.37■□□□□ 0.53
GABPB1-202ENST00000359031 PDE1AP54750 535 aa18.37■□□□□ 0.53
GABPB1-202ENST00000359031 POLA2Q14181 598 aa18.37■□□□□ 0.53
GABPB1-202ENST00000359031 ZNF790Q6PG37 636 aa18.37■□□□□ 0.53
GABPB1-202ENST00000359031 DCAF5Q96JK2 942 aa18.37■□□□□ 0.53
GABPB1-202ENST00000359031 AOX1Q06278 1338 aa18.36■□□□□ 0.53
GABPB1-202ENST00000359031 RAB11FIP3O75154 756 aa18.36■□□□□ 0.53
GABPB1-202ENST00000359031 DEKP35659 375 aaKnown RBP18.36■□□□□ 0.53
GABPB1-202ENST00000359031 KSR2Q6VAB6 950 aa18.36■□□□□ 0.53
GABPB1-202ENST00000359031 DDX21Q9NR30 783 aaKnown RBP eCLIP18.36■□□□□ 0.53
GABPB1-202ENST00000359031 HDAC5Q9UQL6 1122 aa18.36■□□□□ 0.53
GABPB1-202ENST00000359031 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.35■□□□□ 0.53
GABPB1-202ENST00000359031 COL5A2P05997 1499 aaPredicted RBP18.35■□□□□ 0.53
GABPB1-202ENST00000359031 DDX58O95786 925 aaKnown RBP18.35■□□□□ 0.53
GABPB1-202ENST00000359031 ANXA1P04083 346 aa18.35■□□□□ 0.53
GABPB1-202ENST00000359031 SLKQ9H2G2 1235 aaPredicted RBP18.35■□□□□ 0.53
GABPB1-202ENST00000359031 EP400Q96L91 3159 aa18.35■□□□□ 0.53
GABPB1-202ENST00000359031 GLI3P10071 1580 aa18.35■□□□□ 0.53
GABPB1-202ENST00000359031 WDR17Q8IZU2 1322 aa18.35■□□□□ 0.53
GABPB1-202ENST00000359031 DEFB132Q7Z7B7 95 aa18.34■□□□□ 0.53
GABPB1-202ENST00000359031 MX1P20591 662 aa18.34■□□□□ 0.53
GABPB1-202ENST00000359031 PROSER3Q2NL68 480 aa18.34■□□□□ 0.53
GABPB1-202ENST00000359031 KIF2CQ99661 725 aa18.34■□□□□ 0.53
GABPB1-202ENST00000359031 STAP2Q9UGK3 403 aa18.34■□□□□ 0.53
GABPB1-202ENST00000359031 MAP3K2Q9Y2U5 619 aa18.34■□□□□ 0.53
GABPB1-202ENST00000359031 CCDC9Q9Y3X0 531 aaKnown RBP18.34■□□□□ 0.53
GABPB1-202ENST00000359031 PAPPAQ13219 1627 aa18.33■□□□□ 0.53
GABPB1-202ENST00000359031 PPP1R42Q7Z4L9 355 aa18.33■□□□□ 0.52
GABPB1-202ENST00000359031 PRDM11Q9NQV5 511 aa18.33■□□□□ 0.52
GABPB1-202ENST00000359031 SLIT2O94813 1529 aa18.33■□□□□ 0.52
GABPB1-202ENST00000359031 UBR2Q8IWV8 1755 aa18.33■□□□□ 0.52
GABPB1-202ENST00000359031 SHANK3Q9BYB0 1731 aa18.33■□□□□ 0.52
GABPB1-202ENST00000359031 PRAMEF22A3QJZ6 481 aa18.32■□□□□ 0.52
GABPB1-202ENST00000359031 CYP27B1O15528 508 aa18.32■□□□□ 0.52
GABPB1-202ENST00000359031 NBPF7P0C2Y1 421 aaPredicted RBP18.32■□□□□ 0.52
GABPB1-202ENST00000359031 MTX1Q13505 466 aa18.32■□□□□ 0.52
GABPB1-202ENST00000359031 BCL11AQ9H165 835 aa18.32■□□□□ 0.52
GABPB1-202ENST00000359031 AK9Q5TCS8 1911 aa18.31■□□□□ 0.52
GABPB1-202ENST00000359031 REC8O95072 547 aa18.31■□□□□ 0.52
GABPB1-202ENST00000359031 HSP90AB4PQ58FF6 505 aa18.31■□□□□ 0.52
GABPB1-202ENST00000359031 A0A0G2JS52 829 aa18.31■□□□□ 0.52
GABPB1-202ENST00000359031 SRGAP3O43295 1099 aa18.31■□□□□ 0.52
GABPB1-202ENST00000359031 PDIA6Q15084 440 aa18.31■□□□□ 0.52
GABPB1-202ENST00000359031 SEPT12Q8IYM1 358 aa18.31■□□□□ 0.52
GABPB1-202ENST00000359031 TTC5Q8N0Z6 440 aa18.31■□□□□ 0.52
GABPB1-202ENST00000359031 NFATC2IPQ8NCF5 419 aa18.31■□□□□ 0.52
GABPB1-202ENST00000359031 LINS1Q8NG48 757 aa18.31■□□□□ 0.52
GABPB1-202ENST00000359031 PCDH11XQ9BZA7 1347 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms