RNA–Protein interactions for RNA: ENST00000357985.6

FAM3B-201, Transcript of family with sequence similarity 3 member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FAM3B, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-201ENST00000357985 SLC39A6Q13433 755 aa18.05■□□□□ 0.48
FAM3B-201ENST00000357985 MTHFSDQ2M296 383 aaKnown RBP18.05■□□□□ 0.48
FAM3B-201ENST00000357985 TIAM2Q8IVF5 1701 aa18.05■□□□□ 0.48
FAM3B-201ENST00000357985 PER1O15534 1290 aaPredicted RBP18.04■□□□□ 0.48
FAM3B-201ENST00000357985 DALRD3Q5D0E6 543 aaKnown RBP18.04■□□□□ 0.48
FAM3B-201ENST00000357985 USPL1Q5W0Q7 1092 aa18.04■□□□□ 0.48
FAM3B-201ENST00000357985 VSIG10Q8N0Z9 540 aa18.04■□□□□ 0.48
FAM3B-201ENST00000357985 BCORQ6W2J9 1755 aa18.04■□□□□ 0.48
FAM3B-201ENST00000357985 WDR90Q96KV7 1748 aa18.03■□□□□ 0.48
FAM3B-201ENST00000357985 KCNA3P22001 575 aa18.03■□□□□ 0.48
FAM3B-201ENST00000357985 TTC5Q8N0Z6 440 aa18.03■□□□□ 0.48
FAM3B-201ENST00000357985 ZBTB1Q9Y2K1 713 aa18.03■□□□□ 0.48
FAM3B-201ENST00000357985 CCDC88AQ3V6T2 1871 aa18.03■□□□□ 0.48
FAM3B-201ENST00000357985 TM4SF1P30408 202 aa18.02■□□□□ 0.48
FAM3B-201ENST00000357985 ANKRD31Q8N7Z5 1873 aa18.02■□□□□ 0.48
FAM3B-201ENST00000357985 NARFQ9UHQ1 456 aa18.02■□□□□ 0.48
FAM3B-201ENST00000357985 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
FAM3B-201ENST00000357985 C9orf131Q5VYM1 1079 aa18.01■□□□□ 0.47
FAM3B-201ENST00000357985 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
FAM3B-201ENST00000357985 CACNA1SQ13698 1873 aa18.01■□□□□ 0.47
FAM3B-201ENST00000357985 COL11A2P13942 1736 aaPredicted RBP18.01■□□□□ 0.47
FAM3B-201ENST00000357985 TOMM70O94826 608 aa18■□□□□ 0.47
FAM3B-201ENST00000357985 CHRNA5P30532 468 aa18■□□□□ 0.47
FAM3B-201ENST00000357985 TEFQ10587 303 aa18■□□□□ 0.47
FAM3B-201ENST00000357985 NFIXQ14938 502 aa17.99■□□□□ 0.47
FAM3B-201ENST00000357985 RNF181Q9P0P0 153 aa17.99■□□□□ 0.47
FAM3B-201ENST00000357985 KDM2BQ8NHM5 1336 aa17.98■□□□□ 0.47
FAM3B-201ENST00000357985 GNAT3A8MTJ3 354 aa17.98■□□□□ 0.47
FAM3B-201ENST00000357985 STARD3NLO95772 234 aa17.98■□□□□ 0.47
FAM3B-201ENST00000357985 NMRK2Q9NPI5 230 aa17.98■□□□□ 0.47
FAM3B-201ENST00000357985 HEG1Q9ULI3 1381 aa17.98■□□□□ 0.47
FAM3B-201ENST00000357985 ARFGEF2Q9Y6D5 1785 aa17.98■□□□□ 0.47
FAM3B-201ENST00000357985 A0A087WZG4 1122 aa17.97■□□□□ 0.47
FAM3B-201ENST00000357985 CANXP27824 592 aaKnown RBP17.97■□□□□ 0.47
FAM3B-201ENST00000357985 APLP1P51693 650 aa17.97■□□□□ 0.47
FAM3B-201ENST00000357985 CNGB1Q14028 1251 aaPredicted RBP17.97■□□□□ 0.47
FAM3B-201ENST00000357985 DICER1Q9UPY3 1922 aaKnown RBP17.96■□□□□ 0.47
FAM3B-201ENST00000357985 C16orf71Q8IYS4 520 aaPredicted RBP17.96■□□□□ 0.47
FAM3B-201ENST00000357985 CFAP53Q96M91 514 aa17.96■□□□□ 0.47
FAM3B-201ENST00000357985 BCL2L12Q9HB09 334 aa17.96■□□□□ 0.47
FAM3B-201ENST00000357985 CEP350Q5VT06 3117 aa17.96■□□□□ 0.47
FAM3B-201ENST00000357985 ZC3H4Q9UPT8 1303 aaKnown RBP17.96■□□□□ 0.46
FAM3B-201ENST00000357985 CARMIL3Q8ND23 1372 aa17.95■□□□□ 0.46
FAM3B-201ENST00000357985 LAMB4A4D0S4 1761 aa17.95■□□□□ 0.46
FAM3B-201ENST00000357985 SERPINB2P05120 415 aa17.95■□□□□ 0.46
FAM3B-201ENST00000357985 ZNF790Q6PG37 636 aa17.95■□□□□ 0.46
FAM3B-201ENST00000357985 TEX13AQ9BXU3 409 aaPredicted RBP17.95■□□□□ 0.46
FAM3B-201ENST00000357985 CEMIPQ8WUJ3 1361 aa17.94■□□□□ 0.46
FAM3B-201ENST00000357985 RBM46Q8TBY0 533 aaKnown RBP17.94■□□□□ 0.46
FAM3B-201ENST00000357985 FER1L6Q2WGJ9 1857 aa17.94■□□□□ 0.46
FAM3B-201ENST00000357985 EIF5P55010 431 aaKnown RBP17.93■□□□□ 0.46
FAM3B-201ENST00000357985 ZNF496Q96IT1 587 aaPredicted RBP17.93■□□□□ 0.46
FAM3B-201ENST00000357985 RASSF7Q02833 373 aa17.92■□□□□ 0.46
FAM3B-201ENST00000357985 NPM2Q86SE8 214 aaKnown RBP17.92■□□□□ 0.46
FAM3B-201ENST00000357985 IL17REQ8NFR9 667 aa17.92■□□□□ 0.46
FAM3B-201ENST00000357985 FMNL2Q96PY5 1086 aa17.92■□□□□ 0.46
FAM3B-201ENST00000357985 ZNF330Q9Y3S2 320 aaPredicted RBP17.92■□□□□ 0.46
FAM3B-201ENST00000357985 PRKAR2BP31323 418 aa17.91■□□□□ 0.46
FAM3B-201ENST00000357985 IL6STP40189 918 aaPredicted RBP17.91■□□□□ 0.46
FAM3B-201ENST00000357985 BICDL1Q6ZP65 573 aa17.91■□□□□ 0.46
FAM3B-201ENST00000357985 C2CD5Q86YS7 1000 aa17.91■□□□□ 0.46
FAM3B-201ENST00000357985 TTLL6Q8N841 843 aa17.91■□□□□ 0.46
FAM3B-201ENST00000357985 NUDCQ9Y266 331 aa17.91■□□□□ 0.46
FAM3B-201ENST00000357985 DLG5Q8TDM6 1919 aa17.91■□□□□ 0.46
FAM3B-201ENST00000357985 H0YIN7 160 aa17.9■□□□□ 0.46
FAM3B-201ENST00000357985 FSTL1Q12841 308 aa17.9■□□□□ 0.46
FAM3B-201ENST00000357985 IFFO2Q5TF58 517 aa17.9■□□□□ 0.46
FAM3B-201ENST00000357985 RSPH6AQ9H0K4 717 aa17.9■□□□□ 0.46
FAM3B-201ENST00000357985 PDZRN3Q9UPQ7 1066 aa17.9■□□□□ 0.46
FAM3B-201ENST00000357985 LMNB1P20700 586 aa17.89■□□□□ 0.45
FAM3B-201ENST00000357985 TBC1D9BQ66K14 1250 aa17.89■□□□□ 0.45
FAM3B-201ENST00000357985 BTBD11A6QL63 1104 aa17.88■□□□□ 0.45
FAM3B-201ENST00000357985 KDM3BQ7LBC6 1761 aa17.87■□□□□ 0.45
FAM3B-201ENST00000357985 PDE6BP35913 854 aa17.87■□□□□ 0.45
FAM3B-201ENST00000357985 NPHP1O15259 732 aa17.86■□□□□ 0.45
FAM3B-201ENST00000357985 PRR5LQ6MZQ0 368 aa17.86■□□□□ 0.45
FAM3B-201ENST00000357985 RTF1Q92541 710 aaKnown RBP17.86■□□□□ 0.45
FAM3B-201ENST00000357985 RRAGCQ9HB90 399 aa17.86■□□□□ 0.45
FAM3B-201ENST00000357985 TBC1D2BQ9UPU7 963 aa17.86■□□□□ 0.45
FAM3B-201ENST00000357985 SLX4Q8IY92 1834 aa17.86■□□□□ 0.45
FAM3B-201ENST00000357985 A1BGP04217 495 aa17.85■□□□□ 0.45
FAM3B-201ENST00000357985 U2AF1L5P0DN76 240 aaPredicted RBP17.85■□□□□ 0.45
FAM3B-201ENST00000357985 U2AF1Q01081 240 aaKnown RBP eCLIP17.85■□□□□ 0.45
FAM3B-201ENST00000357985 CNBD1Q8NA66 436 aa17.85■□□□□ 0.45
FAM3B-201ENST00000357985 SMC1BQ8NDV3 1235 aa17.85■□□□□ 0.45
FAM3B-201ENST00000357985 ZNF622Q969S3 477 aaKnown RBP eCLIP17.85■□□□□ 0.45
FAM3B-201ENST00000357985 PHACTR3Q96KR7 559 aa17.85■□□□□ 0.45
FAM3B-201ENST00000357985 BRIP1Q9BX63 1249 aa17.85■□□□□ 0.45
FAM3B-201ENST00000357985 NFKBIEO00221 500 aa17.84■□□□□ 0.45
FAM3B-201ENST00000357985 CAMTA2O94983 1202 aa17.84■□□□□ 0.45
FAM3B-201ENST00000357985 ST5P78524 1137 aa17.84■□□□□ 0.45
FAM3B-201ENST00000357985 DZIP3Q86Y13 1208 aaKnown RBP17.84■□□□□ 0.45
FAM3B-201ENST00000357985 SETDB2Q96T68 719 aa17.84■□□□□ 0.45
FAM3B-201ENST00000357985 GLTPD2A6NH11 291 aa17.83■□□□□ 0.44
FAM3B-201ENST00000357985 PPP2R1AP30153 589 aa17.83■□□□□ 0.44
FAM3B-201ENST00000357985 KCNQ3O43525 872 aa17.82■□□□□ 0.44
FAM3B-201ENST00000357985 PRELPP51888 382 aa17.82■□□□□ 0.44
FAM3B-201ENST00000357985 ZNF652Q9Y2D9 606 aa17.82■□□□□ 0.44
FAM3B-201ENST00000357985 SNRPA1P09661 255 aaKnown RBP17.81■□□□□ 0.44
FAM3B-201ENST00000357985 DNAJC5GQ8N7S2 189 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms