RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CCDC178Q5BJE1 867 aa14.72□□□□□ -0.05
SYNCRIP-201ENST00000355238 CEP112Q8N8E3 955 aa14.71□□□□□ -0.05
SYNCRIP-201ENST00000355238 CCDC186Q7Z3E2 898 aa14.71□□□□□ -0.05
SYNCRIP-201ENST00000355238 SMARCA5O60264 1052 aaPredicted RBP14.71□□□□□ -0.05
SYNCRIP-201ENST00000355238 TERF1P54274 439 aa14.71□□□□□ -0.05
SYNCRIP-201ENST00000355238 KIF6Q6ZMV9 814 aa14.71□□□□□ -0.05
SYNCRIP-201ENST00000355238 RASSF4Q9H2L5 321 aa14.71□□□□□ -0.05
SYNCRIP-201ENST00000355238 TAOK3Q9H2K8 898 aa14.71□□□□□ -0.05
SYNCRIP-201ENST00000355238 HLTFQ14527 1009 aaKnown RBP eCLIP14.71□□□□□ -0.06
SYNCRIP-201ENST00000355238 TMX1Q9H3N1 280 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 CAPN2P17655 700 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 GIMAP6Q6P9H5 292 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 ZSCAN22P10073 491 aaPredicted RBP14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 NCOA1Q15788 1441 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 MAATS1Q7Z4T9 603 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 CPLX3Q8WVH0 158 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 TSG101Q99816 390 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 GOPCQ9HD26 462 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 CTAGE15A4D2H0 777 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 IGHDP01880 384 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 CTAGE8P0CG41 777 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 CTAGE6Q86UF2 777 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 CTAGE4Q8IX94 777 aa14.7□□□□□ -0.06
SYNCRIP-201ENST00000355238 PPP1R12BO60237 982 aaPredicted RBP14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 FKBP4Q02790 459 aaKnown RBP eCLIP14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 V9GYY5 206 aaPredicted RBP14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 TIAM1Q13009 1591 aa14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 MICALL1Q8N3F8 863 aa14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 ZSCAN16Q9H4T2 348 aaPredicted RBP14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 OPA1O60313 960 aa14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 ZNF692Q9BU19 519 aaPredicted RBP14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 DNAI1Q9UI46 699 aa14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 CCDC196A0A1B0GTZ2 297 aa14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 RAB3GAP1Q15042 981 aa14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 C8orf34Q49A92 452 aa14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
SYNCRIP-201ENST00000355238 FGD5Q6ZNL6 1462 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 NLRP2Q9NX02 1062 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 SSBP05455 408 aaKnown RBP eCLIP14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 PRIM1P49642 420 aaKnown RBP14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 HDAC1Q13547 482 aaPredicted RBP14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 GOLGA1Q92805 767 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 EBAG9O00559 213 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 KANK3Q6NY19 840 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 SPATA24Q86W54 205 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 TMX3Q96JJ7 454 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 ZFP91Q96JP5 570 aaPredicted RBP14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 TRIM27P14373 513 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 TDO2P48775 406 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 MCM6Q14566 821 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 TTC22Q5TAA0 569 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 TTC12Q9H892 705 aaPredicted RBP14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 CEP126Q9P2H0 1117 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 TFIP11Q9UBB9 837 aaKnown RBP14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
SYNCRIP-201ENST00000355238 EFCAB5A4FU69 1503 aa14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 TUBBP07437 444 aa14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 SYTL4Q96C24 671 aaPredicted RBP14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 SMC5Q8IY18 1101 aa14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 GSTTP1A0A1W2PQM5 241 aa14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 ANO6Q4KMQ2 910 aa14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 ZSWIM4Q9H7M6 989 aa14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 C6orf163Q5TEZ5 329 aa14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 NBPF11Q86T75 865 aa14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 NSD3Q9BZ95 1437 aa14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 ATAD2Q6PL18 1390 aa14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 STAMBPO95630 424 aa14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
SYNCRIP-201ENST00000355238 POTEJP0CG39 1038 aa14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 NSRP1Q9H0G5 558 aaKnown RBP14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 GABPB1Q06547 395 aaPredicted RBP14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 PYM1Q9BRP8 204 aaKnown RBP14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 A0A1B0GUL7 405 aa14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 DESP17661 470 aa14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 C9orf84Q5VXU9 1444 aa14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 BIN1O00499 593 aa14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 UBASH3AP57075 661 aa14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 TDRD12Q587J7 1177 aaKnown RBP14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 USP48Q86UV5 1035 aa14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 JADE2Q9NQC1 790 aa14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 RRAGDQ9NQL2 400 aaPredicted RBP14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 LIG1P18858 919 aa14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 NUCB1Q02818 461 aa14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 PRAM1Q96QH2 718 aa14.66□□□□□ -0.06
SYNCRIP-201ENST00000355238 PIP4K2BP78356 416 aa14.65□□□□□ -0.06
SYNCRIP-201ENST00000355238 TMEM132AQ24JP5 1023 aa14.65□□□□□ -0.06
SYNCRIP-201ENST00000355238 ANAPC15P60006 121 aa14.65□□□□□ -0.06
SYNCRIP-201ENST00000355238 MSL1Q68DK7 614 aa14.65□□□□□ -0.06
SYNCRIP-201ENST00000355238 CEP63Q96MT8 703 aa14.65□□□□□ -0.06
SYNCRIP-201ENST00000355238 PRDM2Q13029 1718 aa14.65□□□□□ -0.06
SYNCRIP-201ENST00000355238 CCDC102BQ68D86 513 aa14.65□□□□□ -0.07
SYNCRIP-201ENST00000355238 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.65□□□□□ -0.079e-11■□□□□ 10.5
SYNCRIP-201ENST00000355238 GUCY1B3Q02153 619 aa14.64□□□□□ -0.07
SYNCRIP-201ENST00000355238 FAM114A1Q8IWE2 563 aa14.64□□□□□ -0.07
SYNCRIP-201ENST00000355238 OTUD6BQ8N6M0 293 aa14.64□□□□□ -0.07
SYNCRIP-201ENST00000355238 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.64□□□□□ -0.073e-9■■■□□ 16.3
SYNCRIP-201ENST00000355238 C10orf67Q8IYJ2 551 aa14.64□□□□□ -0.07
SYNCRIP-201ENST00000355238 WWC2Q6AWC2 1192 aa14.64□□□□□ -0.07
SYNCRIP-201ENST00000355238 CTAGE1Q96RT6 745 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms