RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 TUBB2BQ9BVA1 445 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 DBN1Q16643 649 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 IMMTQ16891 758 aaKnown RBP5.84□□□□□ -1.47
SKP1-202ENST00000353411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.84□□□□□ -1.471e-8■■■□□ 18.6
SKP1-202ENST00000353411 CFAP100Q494V2 611 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 C20orf194Q5TEA3 1177 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 TOP1P11387 765 aaKnown RBP5.84□□□□□ -1.48
SKP1-202ENST00000353411 MMS22LQ6ZRQ5 1243 aa5.84□□□□□ -1.48
SKP1-202ENST00000353411 CFAP65Q6ZU64 1925 aaKnown RBP5.84□□□□□ -1.48
SKP1-202ENST00000353411 FAM114A1Q8IWE2 563 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 OAS2P29728 719 aaKnown RBP5.83□□□□□ -1.48
SKP1-202ENST00000353411 IRX1P78414 480 aaPredicted RBP5.83□□□□□ -1.48
SKP1-202ENST00000353411 SEPT6Q14141 434 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 CCDC30Q5VVM6 783 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 KIAA0586Q9BVV6 1533 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 CNTROBQ8N137 903 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 HSF2BPO75031 334 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 BRPF1P55201 1214 aaPredicted RBP5.83□□□□□ -1.48
SKP1-202ENST00000353411 LRRFIP1Q32MZ4 808 aaKnown RBP5.83□□□□□ -1.48
SKP1-202ENST00000353411 ATF7IPQ6VMQ6 1270 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 NECTIN2Q92692 538 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 CYP46A1Q9Y6A2 500 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 EID1Q9Y6B2 187 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 HFM1A2PYH4 1435 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 HMGB1P1B2RPK0 211 aaPredicted RBP5.83□□□□□ -1.48
SKP1-202ENST00000353411 HIP1O00291 1037 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 CPLX1O14810 134 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 ANAPC15P60006 121 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 RGS22Q8NE09 1264 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 SRCIN1Q9C0H9 1055 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 SRGAP3O43295 1099 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 ELF2Q15723 593 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 HSP90AB4PQ58FF6 505 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 LMNTD2Q8IXW0 634 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 CKAP4Q07065 602 aaKnown RBP5.83□□□□□ -1.48
SKP1-202ENST00000353411 RAD51AP2Q09MP3 1159 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 SMC1AQ14683 1233 aaKnown RBP5.83□□□□□ -1.48
SKP1-202ENST00000353411 EHBP1Q8NDI1 1231 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 LUC7L3O95232 432 aaKnown RBP5.83□□□□□ -1.48
SKP1-202ENST00000353411 GNG11P61952 73 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 WHAMMP3Q1A5X7 153 aa5.83□□□□□ -1.48
SKP1-202ENST00000353411 SH2B1Q9NRF2 756 aaPredicted RBP5.83□□□□□ -1.48
SKP1-202ENST00000353411 PRG4Q92954 1404 aaPredicted RBP5.82□□□□□ -1.48
SKP1-202ENST00000353411 A0A087WUV0 522 aaPredicted RBP5.82□□□□□ -1.48
SKP1-202ENST00000353411 CAMK4Q16566 473 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 SKAP1Q86WV1 359 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 EXOC4Q96A65 974 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 DNAI1Q9UI46 699 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 MYO1CO00159 1063 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 ME1P48163 572 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 SH3GL3Q99963 347 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.82□□□□□ -1.48
SKP1-202ENST00000353411 ANKRD36BQ8N2N9 1353 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 KDM2BQ8NHM5 1336 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 CTAGE15A4D2H0 777 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 CTAGE8P0CG41 777 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 ACTN2P35609 894 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 CTAGE6Q86UF2 777 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 CTAGE4Q8IX94 777 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 DDX41Q9UJV9 622 aaKnown RBP5.82□□□□□ -1.48
SKP1-202ENST00000353411 HECW1Q76N89 1606 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 PTGS1P23219 599 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 SLC4A10Q6U841 1118 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 ARFGAP2Q8N6H7 521 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 BUB1BO60566 1050 aaPredicted RBP5.82□□□□□ -1.48
SKP1-202ENST00000353411 DHX16O60231 1041 aaKnown RBP5.82□□□□□ -1.48
SKP1-202ENST00000353411 PPFIA3O75145 1194 aa5.82□□□□□ -1.48
SKP1-202ENST00000353411 NSRP1Q9H0G5 558 aaKnown RBP5.82□□□□□ -1.48
SKP1-202ENST00000353411 STK38Q15208 465 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 NBPF6Q5VWK0 638 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 NBPF5PQ86XG9 351 aaPredicted RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 GPR161Q8N6U8 529 aaKnown RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 CCDC12Q8WUD4 166 aaPredicted RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 NBPF4Q96M43 638 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 NAA15Q9BXJ9 866 aaKnown RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 VCXQ9H320 206 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 HNRNPH2P55795 449 aaKnown RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 PIAS4Q8N2W9 510 aaPredicted RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 CEP85LQ5SZL2 805 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 WWC2Q6AWC2 1192 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 SUFUQ9UMX1 484 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 PPP2R1AP30153 589 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 BIRC2Q13490 618 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 SAFBQ15424 915 aaKnown RBP eCLIP5.81□□□□□ -1.48
SKP1-202ENST00000353411 JPH4Q96JJ6 628 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 EVCP57679 992 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 CCDC97Q96F63 343 aaPredicted RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 MED4Q9NPJ6 270 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 ZFYP08048 801 aaPredicted RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 BRD3Q15059 726 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 TMC6Q7Z403 805 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 HDGFL2Q7Z4V5 671 aaPredicted RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 NEK11Q8NG66 645 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 TRIM6Q9C030 488 aaPredicted RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 TMEM51Q9NW97 253 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 HYPKQ9NX55 129 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 GPRASP1Q5JY77 1395 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 SYT10Q6XYQ8 523 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 CABS1Q96KC9 395 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 NBPF3Q9H094 633 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms