RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 HDAC1Q13547 482 aaPredicted RBP18.74■□□□□ 0.59
PTPN11-201ENST00000351677 CKAP2LQ8IYA6 745 aa18.74■□□□□ 0.59
PTPN11-201ENST00000351677 C8orf76Q96K31 380 aa18.74■□□□□ 0.59
PTPN11-201ENST00000351677 NAPBQ9H115 298 aa18.74■□□□□ 0.59
PTPN11-201ENST00000351677 AXDND1Q5T1B0 1012 aaPredicted RBP18.74■□□□□ 0.59
PTPN11-201ENST00000351677 ZSCAN29Q8IWY8 852 aaPredicted RBP18.74■□□□□ 0.59
PTPN11-201ENST00000351677 PARD3Q8TEW0 1356 aa18.73■□□□□ 0.59
PTPN11-201ENST00000351677 TMEM132AQ24JP5 1023 aa18.73■□□□□ 0.59
PTPN11-201ENST00000351677 GJB2P29033 226 aa18.73■□□□□ 0.59
PTPN11-201ENST00000351677 SYCP1Q15431 976 aa18.73■□□□□ 0.59
PTPN11-201ENST00000351677 USP5P45974 858 aa18.73■□□□□ 0.59
PTPN11-201ENST00000351677 NOM1Q5C9Z4 860 aaKnown RBP18.73■□□□□ 0.59
PTPN11-201ENST00000351677 AEBP2Q6ZN18 517 aaPredicted RBP18.73■□□□□ 0.59
PTPN11-201ENST00000351677 TFIP11Q9UBB9 837 aaKnown RBP18.73■□□□□ 0.59
PTPN11-201ENST00000351677 TRMT112Q9UI30 125 aaKnown RBP18.73■□□□□ 0.59
PTPN11-201ENST00000351677 NUP153P49790 1475 aaKnown RBP18.72■□□□□ 0.59
PTPN11-201ENST00000351677 PPP1R1BQ9UD71 204 aaPredicted RBP18.72■□□□□ 0.59
PTPN11-201ENST00000351677 SYCP2Q9BX26 1530 aa18.72■□□□□ 0.59
PTPN11-201ENST00000351677 GPTP24298 496 aa18.72■□□□□ 0.59
PTPN11-201ENST00000351677 GOLIM4O00461 696 aa18.72■□□□□ 0.59
PTPN11-201ENST00000351677 ZNF213O14771 459 aa18.72■□□□□ 0.59
PTPN11-201ENST00000351677 BAG4O95429 457 aaKnown RBP18.72■□□□□ 0.59
PTPN11-201ENST00000351677 RBM27Q9P2N5 1060 aaKnown RBP18.72■□□□□ 0.59
PTPN11-201ENST00000351677 PIK3R4Q99570 1358 aa18.72■□□□□ 0.59
PTPN11-201ENST00000351677 USP25Q9UHP3 1055 aa18.72■□□□□ 0.59
PTPN11-201ENST00000351677 FBXO3Q9UK99 471 aa18.72■□□□□ 0.59
PTPN11-201ENST00000351677 SDSP20132 328 aa18.72■□□□□ 0.59
PTPN11-201ENST00000351677 HMGB1P09429 215 aaKnown RBP18.71■□□□□ 0.59
PTPN11-201ENST00000351677 C8orf58Q8NAV2 365 aa18.71■□□□□ 0.59
PTPN11-201ENST00000351677 CEP131Q9UPN4 1083 aa18.71■□□□□ 0.59
PTPN11-201ENST00000351677 CCDC181Q5TID7 509 aa18.71■□□□□ 0.59
PTPN11-201ENST00000351677 PPFIA3O75145 1194 aa18.71■□□□□ 0.59
PTPN11-201ENST00000351677 KRT28Q7Z3Y7 464 aa18.71■□□□□ 0.59
PTPN11-201ENST00000351677 UBE3BQ7Z3V4 1068 aa18.71■□□□□ 0.59
PTPN11-201ENST00000351677 SNRKQ9NRH2 765 aa18.7■□□□□ 0.58
PTPN11-201ENST00000351677 STX6O43752 255 aa18.7■□□□□ 0.58
PTPN11-201ENST00000351677 CAVIN4Q5BKX8 364 aa18.7■□□□□ 0.58
PTPN11-201ENST00000351677 ANO10Q9NW15 660 aa18.7■□□□□ 0.58
PTPN11-201ENST00000351677 DUOX2Q9NRD8 1548 aa18.7■□□□□ 0.58
PTPN11-201ENST00000351677 MYO6Q9UM54 1294 aa18.7■□□□□ 0.58
PTPN11-201ENST00000351677 GOLGA8BA8MQT2 603 aa18.7■□□□□ 0.58
PTPN11-201ENST00000351677 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
PTPN11-201ENST00000351677 CWC15Q9P013 229 aaKnown RBP18.7■□□□□ 0.58
PTPN11-201ENST00000351677 ZRANB1Q9UGI0 708 aa18.7■□□□□ 0.58
PTPN11-201ENST00000351677 UNC13AQ9UPW8 1703 aa18.7■□□□□ 0.58
PTPN11-201ENST00000351677 KLHL10Q6JEL2 608 aa18.7■□□□□ 0.58
PTPN11-201ENST00000351677 ARHGAP45Q92619 1136 aa18.7■□□□□ 0.58
PTPN11-201ENST00000351677 ITSN2Q9NZM3 1697 aa18.69■□□□□ 0.58
PTPN11-201ENST00000351677 MAP3K12Q12852 859 aa18.69■□□□□ 0.58
PTPN11-201ENST00000351677 MRPL50Q8N5N7 158 aaKnown RBP18.69■□□□□ 0.58
PTPN11-201ENST00000351677 ZNF652Q9Y2D9 606 aa18.69■□□□□ 0.58
PTPN11-201ENST00000351677 ANKRD24Q8TF21 1146 aa18.68■□□□□ 0.58
PTPN11-201ENST00000351677 BMP2KQ9NSY1 1161 aaPredicted RBP18.68■□□□□ 0.58
PTPN11-201ENST00000351677 CHPF2Q9P2E5 772 aa18.68■□□□□ 0.58
PTPN11-201ENST00000351677 PLCH2O75038 1416 aa18.68■□□□□ 0.58
PTPN11-201ENST00000351677 ANKRD18BA2A2Z9 1011 aa18.68■□□□□ 0.58
PTPN11-201ENST00000351677 EIF5P55010 431 aaKnown RBP18.68■□□□□ 0.58
PTPN11-201ENST00000351677 LUC7LQ9NQ29 371 aaKnown RBP18.68■□□□□ 0.58
PTPN11-201ENST00000351677 SLC12A7Q9Y666 1083 aa18.68■□□□□ 0.58
PTPN11-201ENST00000351677 RANBP6O60518 1105 aaKnown RBP18.68■□□□□ 0.58
PTPN11-201ENST00000351677 C16orf71Q8IYS4 520 aaPredicted RBP18.68■□□□□ 0.58
PTPN11-201ENST00000351677 RHPN1Q8TCX5 695 aa18.68■□□□□ 0.58
PTPN11-201ENST00000351677 H0YHG0 523 aa18.68■□□□□ 0.58
PTPN11-201ENST00000351677 EPB41L2O43491 1005 aaKnown RBP18.67■□□□□ 0.58
PTPN11-201ENST00000351677 C8orf34Q49A92 452 aa18.67■□□□□ 0.58
PTPN11-201ENST00000351677 TESK2Q96S53 571 aa18.67■□□□□ 0.58
PTPN11-201ENST00000351677 SFPQP23246 707 aaKnown RBP eCLIP18.67■□□□□ 0.58
PTPN11-201ENST00000351677 HAND2P61296 217 aa18.67■□□□□ 0.58
PTPN11-201ENST00000351677 RLBP1P12271 317 aa18.67■□□□□ 0.58
PTPN11-201ENST00000351677 SLC5A1P13866 664 aa18.67■□□□□ 0.58
PTPN11-201ENST00000351677 LEKR1Q6ZMV7 388 aa18.67■□□□□ 0.58
PTPN11-201ENST00000351677 MKNK2Q9HBH9 465 aa18.67■□□□□ 0.58
PTPN11-201ENST00000351677 MPHOSPH10O00566 681 aaKnown RBP18.67■□□□□ 0.58
PTPN11-201ENST00000351677 POLR3DP05423 398 aaPredicted RBP18.67■□□□□ 0.58
PTPN11-201ENST00000351677 RAB11FIP4Q86YS3 637 aa18.67■□□□□ 0.58
PTPN11-201ENST00000351677 IFNL2Q8IZJ0 200 aa18.67■□□□□ 0.58
PTPN11-201ENST00000351677 CLIP2Q9UDT6 1046 aa18.67■□□□□ 0.58
PTPN11-201ENST00000351677 TMX3Q96JJ7 454 aa18.66■□□□□ 0.58
PTPN11-201ENST00000351677 NUP160Q12769 1436 aa18.66■□□□□ 0.58
PTPN11-201ENST00000351677 PPIP5K1Q6PFW1 1433 aa18.66■□□□□ 0.58
PTPN11-201ENST00000351677 CCDC66A2RUB6 948 aa18.66■□□□□ 0.58
PTPN11-201ENST00000351677 IFIT3O14879 490 aaKnown RBP18.66■□□□□ 0.58
PTPN11-201ENST00000351677 CCDC144CPQ8IYA2 1237 aa18.66■□□□□ 0.58
PTPN11-201ENST00000351677 FSIP1Q8NA03 581 aa18.66■□□□□ 0.58
PTPN11-201ENST00000351677 CNKSR2Q8WXI2 1034 aa18.66■□□□□ 0.58
PTPN11-201ENST00000351677 PDCL3Q9H2J4 239 aa18.66■□□□□ 0.58
PTPN11-201ENST00000351677 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.66■□□□□ 0.582e-7■■■■■ 66.1
PTPN11-201ENST00000351677 ADAMTS2O95450 1211 aa18.66■□□□□ 0.58
PTPN11-201ENST00000351677 CHRNA2Q15822 529 aa18.66■□□□□ 0.58
PTPN11-201ENST00000351677 GOLGA8AA7E2F4 631 aa18.66■□□□□ 0.58
PTPN11-201ENST00000351677 CWC25Q9NXE8 425 aaPredicted RBP18.65■□□□□ 0.58
PTPN11-201ENST00000351677 PTPN14Q15678 1187 aa18.65■□□□□ 0.58
PTPN11-201ENST00000351677 ARHGAP29Q52LW3 1261 aa18.65■□□□□ 0.58
PTPN11-201ENST00000351677 CCDC196A0A1B0GTZ2 297 aa18.65■□□□□ 0.58
PTPN11-201ENST00000351677 ZNF76P36508 570 aa18.65■□□□□ 0.58
PTPN11-201ENST00000351677 PDE1AP54750 535 aa18.65■□□□□ 0.58
PTPN11-201ENST00000351677 ZPR1O75312 459 aa18.65■□□□□ 0.58
PTPN11-201ENST00000351677 SEPT11Q9NVA2 429 aaKnown RBP18.65■□□□□ 0.58
PTPN11-201ENST00000351677 HSP90AB3PQ58FF7 597 aa18.65■□□□□ 0.58
PTPN11-201ENST00000351677 KIAA1328Q86T90 577 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms