RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 HACL1Q9UJ83 578 aa13.09□□□□□ -0.31
UBE2D3-205ENST00000350435 MON2Q7Z3U7 1717 aa13.08□□□□□ -0.32
UBE2D3-205ENST00000350435 SMG6Q86US8 1419 aaKnown RBP13.08□□□□□ -0.32
UBE2D3-205ENST00000350435 EPHX2P34913 555 aa13.08□□□□□ -0.32
UBE2D3-205ENST00000350435 CACNB1Q02641 598 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-205ENST00000350435 STAC3Q96MF2 364 aa13.08□□□□□ -0.32
UBE2D3-205ENST00000350435 AFDNP55196 1824 aaKnown RBP13.08□□□□□ -0.32
UBE2D3-205ENST00000350435 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.07□□□□□ -0.32
UBE2D3-205ENST00000350435 TLL2Q9Y6L7 1015 aa13.07□□□□□ -0.32
UBE2D3-205ENST00000350435 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-205ENST00000350435 CD163L1Q9NR16 1453 aa13.06□□□□□ -0.32
UBE2D3-205ENST00000350435 COL5A3P25940 1745 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-205ENST00000350435 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-205ENST00000350435 CIAPIN1Q6FI81 312 aa13.06□□□□□ -0.32
UBE2D3-205ENST00000350435 SZT2Q5T011 3432 aa13.06□□□□□ -0.32
UBE2D3-205ENST00000350435 POLRMTO00411 1230 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-205ENST00000350435 RPS6KA4O75676 772 aa13.05□□□□□ -0.32
UBE2D3-205ENST00000350435 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-205ENST00000350435 FKBP8Q14318 412 aa13.05□□□□□ -0.32
UBE2D3-205ENST00000350435 RC3H1Q5TC82 1133 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-205ENST00000350435 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-205ENST00000350435 TAOK3Q9H2K8 898 aa13.04□□□□□ -0.32
UBE2D3-205ENST00000350435 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
UBE2D3-205ENST00000350435 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
UBE2D3-205ENST00000350435 ZNF831Q5JPB2 1677 aa13.03□□□□□ -0.32
UBE2D3-205ENST00000350435 H0YIN7 160 aa13.03□□□□□ -0.32
UBE2D3-205ENST00000350435 CTU1Q7Z7A3 348 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-205ENST00000350435 NME9Q86XW9 330 aa13.03□□□□□ -0.32
UBE2D3-205ENST00000350435 C2CD5Q86YS7 1000 aa13.03□□□□□ -0.32
UBE2D3-205ENST00000350435 TMOD3Q9NYL9 352 aa13.03□□□□□ -0.32
UBE2D3-205ENST00000350435 LTBP3Q9NS15 1303 aa13.03□□□□□ -0.32
UBE2D3-205ENST00000350435 MYH14Q7Z406 1995 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-205ENST00000350435 AKAP11Q9UKA4 1901 aa13.02□□□□□ -0.32
UBE2D3-205ENST00000350435 CYP27B1O15528 508 aa13.02□□□□□ -0.33
UBE2D3-205ENST00000350435 C21orf2O43822 256 aa13.02□□□□□ -0.33
UBE2D3-205ENST00000350435 FMR1Q06787 632 aaKnown RBP eCLIP13.02□□□□□ -0.33
UBE2D3-205ENST00000350435 CST9Q5W186 159 aa13.02□□□□□ -0.33
UBE2D3-205ENST00000350435 SRP68Q9UHB9 627 aaKnown RBP13.02□□□□□ -0.33
UBE2D3-205ENST00000350435 CNTNAP4Q9C0A0 1308 aa13.02□□□□□ -0.33
UBE2D3-205ENST00000350435 COL6A3P12111 3177 aa13.01□□□□□ -0.33
UBE2D3-205ENST00000350435 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
UBE2D3-205ENST00000350435 COLQQ9Y215 455 aaPredicted RBP13.01□□□□□ -0.33
UBE2D3-205ENST00000350435 MAP3K19Q56UN5 1328 aa13.01□□□□□ -0.33
UBE2D3-205ENST00000350435 EVC2Q86UK5 1308 aa13.01□□□□□ -0.33
UBE2D3-205ENST00000350435 USP42Q9H9J4 1324 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-205ENST00000350435 CACNA1SQ13698 1873 aa13.01□□□□□ -0.33
UBE2D3-205ENST00000350435 NRXN2Q9P2S2 1712 aa13□□□□□ -0.33
UBE2D3-205ENST00000350435 RNF123Q5XPI4 1314 aa13□□□□□ -0.33
UBE2D3-205ENST00000350435 TM4SF1P30408 202 aa13□□□□□ -0.33
UBE2D3-205ENST00000350435 HOXC9P31274 260 aa13□□□□□ -0.33
UBE2D3-205ENST00000350435 HHIPL1Q96JK4 782 aa13□□□□□ -0.33
UBE2D3-205ENST00000350435 MKI67P46013 3256 aaKnown RBP13□□□□□ -0.33
UBE2D3-205ENST00000350435 AMPHP49418 695 aa12.99□□□□□ -0.33
UBE2D3-205ENST00000350435 AKAP4Q5JQC9 854 aa12.99□□□□□ -0.33
UBE2D3-205ENST00000350435 NBPF6Q5VWK0 638 aa12.99□□□□□ -0.33
UBE2D3-205ENST00000350435 SAPCD2Q86UD0 394 aa12.99□□□□□ -0.33
UBE2D3-205ENST00000350435 NBPF4Q96M43 638 aa12.99□□□□□ -0.33
UBE2D3-205ENST00000350435 SAGE1Q9NXZ1 904 aa12.99□□□□□ -0.33
UBE2D3-205ENST00000350435 NOGQ13253 232 aa12.98□□□□□ -0.33
UBE2D3-205ENST00000350435 ZNF622Q969S3 477 aaKnown RBP eCLIP12.98□□□□□ -0.33
UBE2D3-205ENST00000350435 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-205ENST00000350435 ATG3Q9NT62 314 aa12.98□□□□□ -0.33
UBE2D3-205ENST00000350435 KDRP35968 1356 aa12.97□□□□□ -0.33
UBE2D3-205ENST00000350435 PKN2Q16513 984 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-205ENST00000350435 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
UBE2D3-205ENST00000350435 ZNF541Q9H0D2 1346 aa12.96□□□□□ -0.33
UBE2D3-205ENST00000350435 TRAF5O00463 557 aa12.96□□□□□ -0.33
UBE2D3-205ENST00000350435 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
UBE2D3-205ENST00000350435 INSRP06213 1382 aa12.95□□□□□ -0.34
UBE2D3-205ENST00000350435 ZPR1O75312 459 aa12.95□□□□□ -0.34
UBE2D3-205ENST00000350435 NKX1-1Q15270 411 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-205ENST00000350435 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
UBE2D3-205ENST00000350435 TRPA1O75762 1119 aa12.94□□□□□ -0.34
UBE2D3-205ENST00000350435 CELF2O95319 508 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-205ENST00000350435 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
UBE2D3-205ENST00000350435 SLC4A9Q96Q91 983 aa12.94□□□□□ -0.34
UBE2D3-205ENST00000350435 TRIOBPQ9H2D6 2365 aa12.93□□□□□ -0.34
UBE2D3-205ENST00000350435 SERPINB2P05120 415 aa12.93□□□□□ -0.34
UBE2D3-205ENST00000350435 ZIC5Q96T25 663 aa12.93□□□□□ -0.34
UBE2D3-205ENST00000350435 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
UBE2D3-205ENST00000350435 SBNO2Q9Y2G9 1366 aa12.93□□□□□ -0.34
UBE2D3-205ENST00000350435 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
UBE2D3-205ENST00000350435 COL11A2P13942 1736 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-205ENST00000350435 LMOD1P29536 600 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-205ENST00000350435 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
UBE2D3-205ENST00000350435 GPC2Q8N158 579 aa12.92□□□□□ -0.34
UBE2D3-205ENST00000350435 ANKRD31Q8N7Z5 1873 aa12.92□□□□□ -0.34
UBE2D3-205ENST00000350435 U3KPZ7 1027 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-205ENST00000350435 ARFGEF2Q9Y6D5 1785 aa12.92□□□□□ -0.34
UBE2D3-205ENST00000350435 NFIXQ14938 502 aa12.91□□□□□ -0.34
UBE2D3-205ENST00000350435 RNF186Q9NXI6 227 aa12.91□□□□□ -0.34
UBE2D3-205ENST00000350435 HDAC9Q9UKV0 1011 aa12.91□□□□□ -0.34
UBE2D3-205ENST00000350435 CRKLP46109 303 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-205ENST00000350435 MPNDQ8N594 471 aa12.9□□□□□ -0.34
UBE2D3-205ENST00000350435 SPG7Q9UQ90 795 aa12.9□□□□□ -0.34
UBE2D3-205ENST00000350435 CARMIL3Q8ND23 1372 aa12.9□□□□□ -0.34
UBE2D3-205ENST00000350435 PDE6BP35913 854 aa12.89□□□□□ -0.35
UBE2D3-205ENST00000350435 PPARGC1BQ86YN6 1023 aaKnown RBP12.89□□□□□ -0.35
UBE2D3-205ENST00000350435 ZNF408Q9H9D4 720 aa12.89□□□□□ -0.35
UBE2D3-205ENST00000350435 RTL1A6NKG5 1358 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms