RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.39
CUL3-202ENST00000344951 CCDC83Q8IWF9 413 aa17.46■□□□□ 0.39
CUL3-202ENST00000344951 RGS22Q8NE09 1264 aa17.46■□□□□ 0.39
CUL3-202ENST00000344951 CDKL5O76039 1030 aa17.46■□□□□ 0.39
CUL3-202ENST00000344951 CEP126Q9P2H0 1117 aa17.46■□□□□ 0.39
CUL3-202ENST00000344951 TSG101Q99816 390 aa17.46■□□□□ 0.39
CUL3-202ENST00000344951 CRACR2AQ9BSW2 395 aa17.46■□□□□ 0.39
CUL3-202ENST00000344951 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
CUL3-202ENST00000344951 ATP2C2O75185 946 aa17.46■□□□□ 0.39
CUL3-202ENST00000344951 WDHD1O75717 1129 aaPredicted RBP17.46■□□□□ 0.39
CUL3-202ENST00000344951 RAB11FIP4Q86YS3 637 aa17.46■□□□□ 0.39
CUL3-202ENST00000344951 PRDM11Q9NQV5 511 aa17.46■□□□□ 0.39
CUL3-202ENST00000344951 KIF20AO95235 890 aa17.45■□□□□ 0.38
CUL3-202ENST00000344951 AFAP1Q8N556 730 aa17.45■□□□□ 0.38
CUL3-202ENST00000344951 DPH6Q7L8W6 267 aa17.45■□□□□ 0.38
CUL3-202ENST00000344951 DNAI2Q9GZS0 605 aa17.45■□□□□ 0.38
CUL3-202ENST00000344951 IMMTQ16891 758 aaKnown RBP17.44■□□□□ 0.38
CUL3-202ENST00000344951 OTUD6BQ8N6M0 293 aa17.44■□□□□ 0.38
CUL3-202ENST00000344951 EXOC6BQ9Y2D4 811 aa17.44■□□□□ 0.38
CUL3-202ENST00000344951 TCERG1LQ5VWI1 586 aa17.44■□□□□ 0.38
CUL3-202ENST00000344951 UBXN4Q92575 508 aa17.44■□□□□ 0.38
CUL3-202ENST00000344951 MAP3K9P80192 1104 aa17.44■□□□□ 0.38
CUL3-202ENST00000344951 CUL5Q93034 780 aa17.44■□□□□ 0.38
CUL3-202ENST00000344951 CCDC183Q5T5S1 534 aa17.44■□□□□ 0.38
CUL3-202ENST00000344951 EHBP1L1Q8N3D4 1523 aa17.44■□□□□ 0.38
CUL3-202ENST00000344951 PTPN14Q15678 1187 aa17.44■□□□□ 0.38
CUL3-202ENST00000344951 NUP88Q99567 741 aaPredicted RBP17.44■□□□□ 0.38
CUL3-202ENST00000344951 TRMT1Q9NXH9 659 aaKnown RBP17.44■□□□□ 0.38
CUL3-202ENST00000344951 FKBP15Q5T1M5 1219 aa17.43■□□□□ 0.38
CUL3-202ENST00000344951 PRC1O43663 620 aa17.43■□□□□ 0.38
CUL3-202ENST00000344951 C9orf84Q5VXU9 1444 aa17.43■□□□□ 0.38
CUL3-202ENST00000344951 IPO4Q8TEX9 1081 aaKnown RBP17.43■□□□□ 0.38
CUL3-202ENST00000344951 SYNJ1O43426 1573 aa17.43■□□□□ 0.38
CUL3-202ENST00000344951 SMTNL1A8MU46 457 aa17.43■□□□□ 0.38
CUL3-202ENST00000344951 PANK2Q9BZ23 570 aa17.43■□□□□ 0.38
CUL3-202ENST00000344951 PPM1EQ8WY54 764 aa17.43■□□□□ 0.38
CUL3-202ENST00000344951 FEZ1Q99689 392 aa17.42■□□□□ 0.38
CUL3-202ENST00000344951 TIAM1Q13009 1591 aa17.42■□□□□ 0.38
CUL3-202ENST00000344951 TMPOP42166 694 aaKnown RBP17.42■□□□□ 0.38
CUL3-202ENST00000344951 RARSP54136 660 aaKnown RBP17.42■□□□□ 0.38
CUL3-202ENST00000344951 RPAP2Q8IXW5 612 aaPredicted RBP17.42■□□□□ 0.38
CUL3-202ENST00000344951 USP25Q9UHP3 1055 aa17.42■□□□□ 0.38
CUL3-202ENST00000344951 ZNF444Q8N0Y2 327 aaPredicted RBP17.42■□□□□ 0.38
CUL3-202ENST00000344951 USHBP1Q8N6Y0 703 aa17.42■□□□□ 0.38
CUL3-202ENST00000344951 SSX2IPQ9Y2D8 614 aa17.42■□□□□ 0.38
CUL3-202ENST00000344951 HLTFQ14527 1009 aaKnown RBP eCLIP17.42■□□□□ 0.387e-7■■■□□ 14.7
CUL3-202ENST00000344951 PAIP2Q9BPZ3 127 aaKnown RBP17.42■□□□□ 0.38
CUL3-202ENST00000344951 FAM107BQ9H098 131 aa17.42■□□□□ 0.38
CUL3-202ENST00000344951 SHTN1A0MZ66 631 aa17.42■□□□□ 0.38
CUL3-202ENST00000344951 GPATCH11Q8N954 259 aa17.42■□□□□ 0.38
CUL3-202ENST00000344951 BOLA2Q9H3K6 86 aa17.42■□□□□ 0.38
CUL3-202ENST00000344951 CAVIN4Q5BKX8 364 aa17.41■□□□□ 0.38
CUL3-202ENST00000344951 BICD1Q96G01 975 aa17.41■□□□□ 0.38
CUL3-202ENST00000344951 URI1O94763 535 aaPredicted RBP17.41■□□□□ 0.38
CUL3-202ENST00000344951 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.383e-10■■■■■ 43.4
CUL3-202ENST00000344951 SPECC1Q5M775 1068 aa17.41■□□□□ 0.38
CUL3-202ENST00000344951 KIF4BQ2VIQ3 1234 aa17.41■□□□□ 0.38
CUL3-202ENST00000344951 THUMPD2Q9BTF0 503 aaKnown RBP17.41■□□□□ 0.38
CUL3-202ENST00000344951 MYD88Q99836 296 aa17.41■□□□□ 0.38
CUL3-202ENST00000344951 NKTRP30414 1462 aaKnown RBP17.4■□□□□ 0.38
CUL3-202ENST00000344951 PRPF40BQ6NWY9 871 aaKnown RBP17.4■□□□□ 0.38
CUL3-202ENST00000344951 MPRIPQ6WCQ1 1025 aa17.4■□□□□ 0.38
CUL3-202ENST00000344951 SYCP3Q8IZU3 236 aa17.4■□□□□ 0.38
CUL3-202ENST00000344951 CEP131Q9UPN4 1083 aa17.4■□□□□ 0.38
CUL3-202ENST00000344951 NSD3Q9BZ95 1437 aa17.4■□□□□ 0.38
CUL3-202ENST00000344951 FERP16591 822 aa17.4■□□□□ 0.38
CUL3-202ENST00000344951 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
CUL3-202ENST00000344951 CLIP2Q9UDT6 1046 aa17.4■□□□□ 0.38
CUL3-202ENST00000344951 GJC1P36383 396 aa17.4■□□□□ 0.38
CUL3-202ENST00000344951 NOP2P46087 812 aaKnown RBP17.4■□□□□ 0.38
CUL3-202ENST00000344951 RBM27Q9P2N5 1060 aaKnown RBP17.4■□□□□ 0.38
CUL3-202ENST00000344951 CCT2P78371 535 aaKnown RBP17.39■□□□□ 0.38
CUL3-202ENST00000344951 NLRP5P59047 1200 aa17.39■□□□□ 0.37
CUL3-202ENST00000344951 MX1P20591 662 aa17.39■□□□□ 0.37
CUL3-202ENST00000344951 BIN1O00499 593 aa17.39■□□□□ 0.37
CUL3-202ENST00000344951 C6orf229H3BNL8 230 aa17.39■□□□□ 0.37
CUL3-202ENST00000344951 PPP1R14CQ8TAE6 165 aa17.39■□□□□ 0.37
CUL3-202ENST00000344951 PPP4R3BQ5MIZ7 849 aa17.38■□□□□ 0.37
CUL3-202ENST00000344951 SSH1Q8WYL5 1049 aa17.38■□□□□ 0.37
CUL3-202ENST00000344951 ZNF622Q969S3 477 aaKnown RBP eCLIP17.38■□□□□ 0.374e-7■■□□□ 11.4
CUL3-202ENST00000344951 ANKRD30BQ9BXX2 1392 aa17.38■□□□□ 0.37
CUL3-202ENST00000344951 WASF1Q92558 559 aa17.38■□□□□ 0.37
CUL3-202ENST00000344951 GDPD2Q9HCC8 539 aa17.38■□□□□ 0.37
CUL3-202ENST00000344951 ZHX1Q9UKY1 873 aaPredicted RBP17.38■□□□□ 0.37
CUL3-202ENST00000344951 ZMYND15Q9H091 742 aa17.38■□□□□ 0.37
CUL3-202ENST00000344951 CTNNA3Q9UI47 895 aa17.38■□□□□ 0.37
CUL3-202ENST00000344951 CLEC11AQ9Y240 323 aa17.38■□□□□ 0.37
CUL3-202ENST00000344951 DAPK1P53355 1430 aa17.38■□□□□ 0.37
CUL3-202ENST00000344951 MYO1BO43795 1136 aa17.38■□□□□ 0.37
CUL3-202ENST00000344951 GPTP24298 496 aa17.38■□□□□ 0.37
CUL3-202ENST00000344951 C16orf45Q96MC5 204 aaPredicted RBP17.38■□□□□ 0.37
CUL3-202ENST00000344951 GCOM1H8Y6P7 765 aaPredicted RBP17.37■□□□□ 0.37
CUL3-202ENST00000344951 MYZAPP0CAP1 466 aa17.37■□□□□ 0.37
CUL3-202ENST00000344951 CKAP2LQ8IYA6 745 aa17.37■□□□□ 0.37
CUL3-202ENST00000344951 NAPBQ9H115 298 aa17.37■□□□□ 0.37
CUL3-202ENST00000344951 SFPQP23246 707 aaKnown RBP eCLIP17.37■□□□□ 0.37
CUL3-202ENST00000344951 NFE2L2Q16236 605 aa17.37■□□□□ 0.37
CUL3-202ENST00000344951 MAATS1Q7Z4T9 603 aa17.37■□□□□ 0.37
CUL3-202ENST00000344951 CGNQ9P2M7 1197 aaKnown RBP17.37■□□□□ 0.37
CUL3-202ENST00000344951 TSNARE1Q96NA8 513 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms