RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 STAP2Q9UGK3 403 aa29.16■■■□□ 2.26
NELFB-201ENST00000343053 HTATSF1O43719 755 aaKnown RBP29.15■■■□□ 2.26
NELFB-201ENST00000343053 CUL4AQ13619 759 aa29.15■■■□□ 2.26
NELFB-201ENST00000343053 SRCIN1Q9C0H9 1055 aa29.15■■■□□ 2.26
NELFB-201ENST00000343053 GADD45BO75293 160 aaPredicted RBP29.14■■■□□ 2.26
NELFB-201ENST00000343053 RHPN1Q8TCX5 695 aa29.14■■■□□ 2.26
NELFB-201ENST00000343053 CPA1P15085 419 aa29.14■■■□□ 2.25
NELFB-201ENST00000343053 LRSAM1Q6UWE0 723 aa29.14■■■□□ 2.25
NELFB-201ENST00000343053 SSH3Q8TE77 659 aa29.14■■■□□ 2.25
NELFB-201ENST00000343053 PI4KAP2A4QPH2 592 aa29.13■■■□□ 2.25
NELFB-201ENST00000343053 PI4KAP1Q8N8J0 262 aa29.13■■■□□ 2.25
NELFB-201ENST00000343053 TCHHQ07283 1943 aa29.13■■■□□ 2.25
NELFB-201ENST00000343053 SPG7Q9UQ90 795 aa29.13■■■□□ 2.25
NELFB-201ENST00000343053 MCM2P49736 904 aa29.12■■■□□ 2.25
NELFB-201ENST00000343053 CWC27Q6UX04 472 aaKnown RBP29.12■■■□□ 2.25
NELFB-201ENST00000343053 KIAA1211Q6ZU35 1233 aa29.12■■■□□ 2.25
NELFB-201ENST00000343053 TBX22Q9Y458 520 aa29.12■■■□□ 2.25
NELFB-201ENST00000343053 PI4K2BQ8TCG2 481 aa29.11■■■□□ 2.25
NELFB-201ENST00000343053 ANAPC15P60006 121 aa29.1■■■□□ 2.25
NELFB-201ENST00000343053 OS9Q13438 667 aaPredicted RBP29.1■■■□□ 2.25
NELFB-201ENST00000343053 NBPF6Q5VWK0 638 aa29.1■■■□□ 2.25
NELFB-201ENST00000343053 LRRC59Q96AG4 307 aaKnown RBP29.1■■■□□ 2.25
NELFB-201ENST00000343053 NBPF4Q96M43 638 aa29.1■■■□□ 2.25
NELFB-201ENST00000343053 MPNDQ8N594 471 aa29.09■■■□□ 2.25
NELFB-201ENST00000343053 MARF1Q9Y4F3 1742 aaKnown RBP29.09■■■□□ 2.25
NELFB-201ENST00000343053 RASEFQ8IZ41 740 aa29.09■■■□□ 2.25
NELFB-201ENST00000343053 DDX54Q8TDD1 881 aaKnown RBP29.09■■■□□ 2.25
NELFB-201ENST00000343053 XPCQ01831 940 aaPredicted RBP29.08■■■□□ 2.25
NELFB-201ENST00000343053 HSPA4P34932 840 aa29.08■■■□□ 2.25
NELFB-201ENST00000343053 MPRIPQ6WCQ1 1025 aa29.08■■■□□ 2.25
NELFB-201ENST00000343053 CACNA1FO60840 1977 aa29.08■■■□□ 2.25
NELFB-201ENST00000343053 MBD3O95983 291 aa29.06■■■□□ 2.24
NELFB-201ENST00000343053 EIF4A1P60842 406 aaKnown RBP29.06■■■□□ 2.24
NELFB-201ENST00000343053 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.06■■■□□ 2.24
NELFB-201ENST00000343053 SNX14Q9Y5W7 946 aa29.06■■■□□ 2.24
NELFB-201ENST00000343053 DNAAF4Q8WXU2 420 aa29.06■■■□□ 2.24
NELFB-201ENST00000343053 POLA2Q14181 598 aa29.05■■■□□ 2.24
NELFB-201ENST00000343053 USP48Q86UV5 1035 aa29.05■■■□□ 2.24
NELFB-201ENST00000343053 INTS4Q96HW7 963 aaKnown RBP29.05■■■□□ 2.24
NELFB-201ENST00000343053 SGSM2O43147 1006 aa29.05■■■□□ 2.24
NELFB-201ENST00000343053 HSP90AA2PQ14568 343 aaPredicted RBP29.05■■■□□ 2.24
NELFB-201ENST00000343053 PDLIM2Q96JY6 352 aa29.05■■■□□ 2.24
NELFB-201ENST00000343053 PA2G4Q9UQ80 394 aaKnown RBP29.05■■■□□ 2.24
NELFB-201ENST00000343053 KIF1BPQ96EK5 621 aa29.04■■■□□ 2.24
NELFB-201ENST00000343053 RAD50Q92878 1312 aa29.04■■■□□ 2.24
NELFB-201ENST00000343053 AK2P54819 239 aa29.04■■■□□ 2.24
NELFB-201ENST00000343053 BEND3Q5T5X7 828 aa29.04■■■□□ 2.24
NELFB-201ENST00000343053 PXDNLA1KZ92 1463 aa29.03■■■□□ 2.24
NELFB-201ENST00000343053 CNPY2Q9Y2B0 182 aa29.03■■■□□ 2.24
NELFB-201ENST00000343053 LTN1O94822 1766 aa29.02■■■□□ 2.24
NELFB-201ENST00000343053 RPAP1Q9BWH6 1393 aaPredicted RBP29.02■■■□□ 2.24
NELFB-201ENST00000343053 PRAMEF22A3QJZ6 481 aa29.02■■■□□ 2.24
NELFB-201ENST00000343053 RAB11FIP3O75154 756 aa29.02■■■□□ 2.24
NELFB-201ENST00000343053 CNTROBQ8N137 903 aa29.02■■■□□ 2.24
NELFB-201ENST00000343053 TEFQ10587 303 aa29.01■■■□□ 2.24
NELFB-201ENST00000343053 LSG1Q9H089 658 aaKnown RBP29.01■■■□□ 2.24
NELFB-201ENST00000343053 LARGE1O95461 756 aa29.01■■■□□ 2.23
NELFB-201ENST00000343053 PROSER3Q2NL68 480 aa29.01■■■□□ 2.23
NELFB-201ENST00000343053 ZNF530Q6P9A1 599 aaPredicted RBP29.01■■■□□ 2.23
NELFB-201ENST00000343053 AOX1Q06278 1338 aa29.01■■■□□ 2.23
NELFB-201ENST00000343053 BTBD11A6QL63 1104 aa29■■■□□ 2.23
NELFB-201ENST00000343053 R3HCC1Q9Y3T6 440 aaKnown RBP29■■■□□ 2.23
NELFB-201ENST00000343053 N4BP2Q86UW6 1770 aaPredicted RBP29■■■□□ 2.23
NELFB-201ENST00000343053 CASTP20810 708 aaKnown RBP28.99■■■□□ 2.23
NELFB-201ENST00000343053 CWF19L2Q2TBE0 894 aaKnown RBP28.99■■■□□ 2.23
NELFB-201ENST00000343053 TSPY26PQ9H489 355 aa28.99■■■□□ 2.23
NELFB-201ENST00000343053 RGPD2P0DJD1 1756 aa28.99■■■□□ 2.23
NELFB-201ENST00000343053 WDR33Q9C0J8 1336 aaKnown RBP28.99■■■□□ 2.23
NELFB-201ENST00000343053 RUFY3Q7L099 469 aa28.99■■■□□ 2.23
NELFB-201ENST00000343053 THEMISQ8N1K5 641 aaPredicted RBP28.99■■■□□ 2.23
NELFB-201ENST00000343053 NOL7Q9UMY1 257 aaKnown RBP28.99■■■□□ 2.23
NELFB-201ENST00000343053 PHF8Q9UPP1 1060 aa28.99■■■□□ 2.23
NELFB-201ENST00000343053 ADCY9O60503 1353 aa28.98■■■□□ 2.23
NELFB-201ENST00000343053 SLIT1O75093 1534 aa28.98■■■□□ 2.23
NELFB-201ENST00000343053 CEMIPQ8WUJ3 1361 aa28.98■■■□□ 2.23
NELFB-201ENST00000343053 OFD1O75665 1012 aa28.97■■■□□ 2.23
NELFB-201ENST00000343053 PTH1RQ03431 593 aa28.97■■■□□ 2.23
NELFB-201ENST00000343053 ARHGAP23Q9P227 1491 aa28.97■■■□□ 2.23
NELFB-201ENST00000343053 DIAPH3Q9NSV4 1193 aa28.97■■■□□ 2.23
NELFB-201ENST00000343053 FIBPO43427 364 aa28.97■■■□□ 2.23
NELFB-201ENST00000343053 LMOD2Q6P5Q4 547 aa28.97■■■□□ 2.23
NELFB-201ENST00000343053 MAP3K2Q9Y2U5 619 aa28.97■■■□□ 2.23
NELFB-201ENST00000343053 C9orf78Q9NZ63 289 aaPredicted RBP28.96■■■□□ 2.23
NELFB-201ENST00000343053 ADCK5Q3MIX3 580 aa28.96■■■□□ 2.23
NELFB-201ENST00000343053 PTMAP06454 111 aaKnown RBP28.95■■■□□ 2.23
NELFB-201ENST00000343053 PRPF40BQ6NWY9 871 aaKnown RBP28.95■■■□□ 2.23
NELFB-201ENST00000343053 CCDC83Q8IWF9 413 aa28.95■■■□□ 2.23
NELFB-201ENST00000343053 IP6K1Q92551 441 aa28.95■■■□□ 2.23
NELFB-201ENST00000343053 TTC14Q96N46 770 aa28.95■■■□□ 2.23
NELFB-201ENST00000343053 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.95■■■□□ 2.22
NELFB-201ENST00000343053 ESCO1Q5FWF5 840 aa28.94■■■□□ 2.22
NELFB-201ENST00000343053 AIMP1Q12904 312 aaKnown RBP28.94■■■□□ 2.22
NELFB-201ENST00000343053 BABAM1Q9NWV8 329 aa28.94■■■□□ 2.22
NELFB-201ENST00000343053 ZKSCAN5Q9Y2L8 839 aa28.94■■■□□ 2.22
NELFB-201ENST00000343053 SYT1P21579 422 aa28.93■■■□□ 2.22
NELFB-201ENST00000343053 RBM10P98175 930 aaKnown RBP28.93■■■□□ 2.22
NELFB-201ENST00000343053 COL9A3Q14050 684 aaPredicted RBP28.93■■■□□ 2.22
NELFB-201ENST00000343053 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.93■■■□□ 2.22
NELFB-201ENST00000343053 ANKARQ7Z5J8 1434 aa28.93■■■□□ 2.22
NELFB-201ENST00000343053 JAKMIP1Q96N16 626 aaKnown RBP28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms