RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 RAPGEF3O95398 923 aa16.79■□□□□ 0.28
PDPK1-202ENST00000342085 FYCO1Q9BQS8 1478 aa16.79■□□□□ 0.28
PDPK1-202ENST00000342085 ATP2B3Q16720 1220 aa16.79■□□□□ 0.28
PDPK1-202ENST00000342085 PHACTR2O75167 634 aa16.79■□□□□ 0.28
PDPK1-202ENST00000342085 FAM212AQ96EL1 285 aa16.79■□□□□ 0.28
PDPK1-202ENST00000342085 CDC5LQ99459 802 aaKnown RBP16.79■□□□□ 0.28
PDPK1-202ENST00000342085 FOXO3O43524 673 aa16.78■□□□□ 0.28
PDPK1-202ENST00000342085 CCDC192P0DO97 292 aa16.78■□□□□ 0.28
PDPK1-202ENST00000342085 TFCP2L1Q9NZI6 479 aa16.78■□□□□ 0.28
PDPK1-202ENST00000342085 LDHCP07864 332 aa16.78■□□□□ 0.28
PDPK1-202ENST00000342085 FAM43AQ8N2R8 423 aa16.78■□□□□ 0.28
PDPK1-202ENST00000342085 CFAP45Q9UL16 551 aa16.78■□□□□ 0.28
PDPK1-202ENST00000342085 CATIPQ7Z7H3 387 aa16.77■□□□□ 0.28
PDPK1-202ENST00000342085 SLC12A7Q9Y666 1083 aa16.77■□□□□ 0.28
PDPK1-202ENST00000342085 LPXNO60711 386 aa16.77■□□□□ 0.28
PDPK1-202ENST00000342085 SLU7O95391 586 aaKnown RBP16.77■□□□□ 0.28
PDPK1-202ENST00000342085 TDRD12Q587J7 1177 aaKnown RBP16.77■□□□□ 0.28
PDPK1-202ENST00000342085 NUTM1Q86Y26 1132 aa16.77■□□□□ 0.28
PDPK1-202ENST00000342085 FGFR1OPO95684 399 aaKnown RBP16.77■□□□□ 0.28
PDPK1-202ENST00000342085 PARP3Q9Y6F1 533 aa16.77■□□□□ 0.28
PDPK1-202ENST00000342085 STXBP4Q6ZWJ1 553 aa16.77■□□□□ 0.27
PDPK1-202ENST00000342085 PICALMQ13492 652 aa16.77■□□□□ 0.27
PDPK1-202ENST00000342085 TSPY2A6NKD2 308 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 ACTN2P35609 894 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 PRKRIP1Q9H875 184 aaPredicted RBP16.76■□□□□ 0.27
PDPK1-202ENST00000342085 CCDC196A0A1B0GTZ2 297 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 NDC80O14777 642 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 ERLIN1O75477 346 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 CCDC148Q8NFR7 591 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
PDPK1-202ENST00000342085 KRT32Q14532 448 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 PPP1R42Q7Z4L9 355 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 MPNDQ8N594 471 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 ZBTB24O43167 697 aaPredicted RBP16.76■□□□□ 0.27
PDPK1-202ENST00000342085 ARHGAP29Q52LW3 1261 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 ZBTB3Q9H5J0 574 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 BCCIPQ9P287 314 aaKnown RBP eCLIP16.76■□□□□ 0.27
PDPK1-202ENST00000342085 FANCD2Q9BXW9 1451 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 IFFO1Q0D2I5 559 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 A0A087WZG4 1122 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 EIF3JO75822 258 aaKnown RBP16.76■□□□□ 0.27
PDPK1-202ENST00000342085 IL27Q8NEV9 243 aa16.76■□□□□ 0.27
PDPK1-202ENST00000342085 ZNF644Q9H582 1327 aaPredicted RBP16.76■□□□□ 0.27
PDPK1-202ENST00000342085 KAT14Q9H8E8 782 aa16.75■□□□□ 0.27
PDPK1-202ENST00000342085 MBD3O95983 291 aa16.75■□□□□ 0.27
PDPK1-202ENST00000342085 SPOUT1Q5T280 376 aaKnown RBP16.75■□□□□ 0.27
PDPK1-202ENST00000342085 UPF3BQ9BZI7 483 aaKnown RBP16.75■□□□□ 0.27
PDPK1-202ENST00000342085 KAT6BQ8WYB5 2073 aa16.75■□□□□ 0.27
PDPK1-202ENST00000342085 STX6O43752 255 aa16.75■□□□□ 0.27
PDPK1-202ENST00000342085 PRPF4BQ13523 1007 aaKnown RBP16.75■□□□□ 0.27
PDPK1-202ENST00000342085 CALML4Q96GE6 196 aa16.75■□□□□ 0.27
PDPK1-202ENST00000342085 TCHPQ9BT92 498 aa16.75■□□□□ 0.27
PDPK1-202ENST00000342085 LUZP1Q86V48 1076 aa16.75■□□□□ 0.27
PDPK1-202ENST00000342085 CFAP100Q494V2 611 aa16.74■□□□□ 0.27
PDPK1-202ENST00000342085 GCC1Q96CN9 775 aa16.74■□□□□ 0.27
PDPK1-202ENST00000342085 BOLA2Q9H3K6 86 aa16.74■□□□□ 0.27
PDPK1-202ENST00000342085 B4DLN1 442 aa16.74■□□□□ 0.27
PDPK1-202ENST00000342085 IFIT3O14879 490 aaKnown RBP16.74■□□□□ 0.27
PDPK1-202ENST00000342085 MRPL12P52815 198 aaKnown RBP16.74■□□□□ 0.27
PDPK1-202ENST00000342085 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
PDPK1-202ENST00000342085 IDEP14735 1019 aa16.74■□□□□ 0.27
PDPK1-202ENST00000342085 SETDB2Q96T68 719 aa16.74■□□□□ 0.27
PDPK1-202ENST00000342085 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDPK1-202ENST00000342085 SSRP1Q08945 709 aaKnown RBP16.74■□□□□ 0.27
PDPK1-202ENST00000342085 CCDC102AQ96A19 550 aa16.74■□□□□ 0.27
PDPK1-202ENST00000342085 ZNF213O14771 459 aa16.73■□□□□ 0.27
PDPK1-202ENST00000342085 CCDC40Q4G0X9 1142 aa16.73■□□□□ 0.27
PDPK1-202ENST00000342085 PPP1R14CQ8TAE6 165 aa16.73■□□□□ 0.27
PDPK1-202ENST00000342085 ZWINTO95229 277 aa16.73■□□□□ 0.27
PDPK1-202ENST00000342085 PDE4BQ07343 736 aa16.73■□□□□ 0.27
PDPK1-202ENST00000342085 SMTNL1A8MU46 457 aa16.73■□□□□ 0.27
PDPK1-202ENST00000342085 CCDC144CPQ8IYA2 1237 aa16.73■□□□□ 0.27
PDPK1-202ENST00000342085 RSPH6AQ9H0K4 717 aa16.73■□□□□ 0.27
PDPK1-202ENST00000342085 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
PDPK1-202ENST00000342085 RNF41Q9H4P4 317 aaPredicted RBP16.73■□□□□ 0.27
PDPK1-202ENST00000342085 CASTP20810 708 aaKnown RBP16.72■□□□□ 0.27
PDPK1-202ENST00000342085 CCDC12Q8WUD4 166 aaPredicted RBP16.72■□□□□ 0.27
PDPK1-202ENST00000342085 TMCO5BA8MYB1 307 aa16.72■□□□□ 0.27
PDPK1-202ENST00000342085 ADAMTS8Q9UP79 889 aa16.72■□□□□ 0.27
PDPK1-202ENST00000342085 GUCY1B3Q02153 619 aa16.72■□□□□ 0.27
PDPK1-202ENST00000342085 PROCA1Q8NCQ7 364 aaPredicted RBP16.72■□□□□ 0.27
PDPK1-202ENST00000342085 LRPPRCP42704 1394 aaKnown RBP16.72■□□□□ 0.27
PDPK1-202ENST00000342085 PRKCSHP14314 528 aaPredicted RBP16.71■□□□□ 0.27
PDPK1-202ENST00000342085 TBCAO75347 108 aaKnown RBP16.71■□□□□ 0.27
PDPK1-202ENST00000342085 GSTO1P78417 241 aa16.71■□□□□ 0.27
PDPK1-202ENST00000342085 GCOM1H8Y6P7 765 aaPredicted RBP16.71■□□□□ 0.26
PDPK1-202ENST00000342085 MYZAPP0CAP1 466 aa16.71■□□□□ 0.26
PDPK1-202ENST00000342085 ALS2CR12Q96Q35 445 aa16.71■□□□□ 0.26
PDPK1-202ENST00000342085 WDR33Q9C0J8 1336 aaKnown RBP16.71■□□□□ 0.26
PDPK1-202ENST00000342085 ATP6V1AP38606 617 aa16.7■□□□□ 0.26
PDPK1-202ENST00000342085 PHAXQ9H814 394 aaKnown RBP16.7■□□□□ 0.26
PDPK1-202ENST00000342085 GPHNQ9NQX3 736 aaPredicted RBP16.7■□□□□ 0.26
PDPK1-202ENST00000342085 NUDT16Q96DE0 195 aaKnown RBP16.7■□□□□ 0.26
PDPK1-202ENST00000342085 GOLGA8AA7E2F4 631 aa16.7■□□□□ 0.26
PDPK1-202ENST00000342085 GOLGA8BA8MQT2 603 aa16.7■□□□□ 0.26
PDPK1-202ENST00000342085 SP4Q02446 784 aa16.7■□□□□ 0.26
PDPK1-202ENST00000342085 KRT28Q7Z3Y7 464 aa16.7■□□□□ 0.26
PDPK1-202ENST00000342085 IKBKGQ9Y6K9 419 aa16.7■□□□□ 0.26
PDPK1-202ENST00000342085 FILIP1Q7Z7B0 1213 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms