RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 TNNT3P45378 269 aaPredicted RBP22.72■■□□□ 1.23
SH2B3-201ENST00000341259 YTHDC2Q9H6S0 1430 aaKnown RBP22.71■■□□□ 1.23
SH2B3-201ENST00000341259 BRPF1P55201 1214 aaPredicted RBP22.71■■□□□ 1.23
SH2B3-201ENST00000341259 CADPS2Q86UW7 1296 aa22.71■■□□□ 1.23
SH2B3-201ENST00000341259 CHPF2Q9P2E5 772 aa22.71■■□□□ 1.23
SH2B3-201ENST00000341259 SSFA2P28290 1259 aa22.71■■□□□ 1.23
SH2B3-201ENST00000341259 SOGA3Q5TF21 947 aa22.71■■□□□ 1.23
SH2B3-201ENST00000341259 ATP5J2-PTCD1G3V325 749 aa22.7■■□□□ 1.22
SH2B3-201ENST00000341259 SNRPA1P09661 255 aaKnown RBP22.7■■□□□ 1.22
SH2B3-201ENST00000341259 SMARCE1Q969G3 411 aa22.7■■□□□ 1.22
SH2B3-201ENST00000341259 CEP170Q5SW79 1584 aa22.7■■□□□ 1.22
SH2B3-201ENST00000341259 SYCE3A1L190 88 aa22.7■■□□□ 1.22
SH2B3-201ENST00000341259 ANKRD18BA2A2Z9 1011 aa22.7■■□□□ 1.22
SH2B3-201ENST00000341259 IL27Q8NEV9 243 aa22.7■■□□□ 1.22
SH2B3-201ENST00000341259 LIMCH1Q9UPQ0 1083 aa22.7■■□□□ 1.22
SH2B3-201ENST00000341259 CCP110O43303 1012 aa22.69■■□□□ 1.22
SH2B3-201ENST00000341259 CWC25Q9NXE8 425 aaPredicted RBP22.69■■□□□ 1.22
SH2B3-201ENST00000341259 EXOC5O00471 708 aa22.69■■□□□ 1.22
SH2B3-201ENST00000341259 OFD1O75665 1012 aa22.69■■□□□ 1.22
SH2B3-201ENST00000341259 MTHFSDQ2M296 383 aaKnown RBP22.69■■□□□ 1.22
SH2B3-201ENST00000341259 MPNDQ8N594 471 aa22.69■■□□□ 1.22
SH2B3-201ENST00000341259 CAVIN4Q5BKX8 364 aa22.69■■□□□ 1.22
SH2B3-201ENST00000341259 TTLL5Q6EMB2 1281 aa22.69■■□□□ 1.22
SH2B3-201ENST00000341259 TNPO1Q92973 898 aaKnown RBP22.69■■□□□ 1.22
SH2B3-201ENST00000341259 ZPR1O75312 459 aa22.68■■□□□ 1.22
SH2B3-201ENST00000341259 HMGB1P09429 215 aaKnown RBP22.68■■□□□ 1.22
SH2B3-201ENST00000341259 TNNQ9UQP3 1299 aa22.68■■□□□ 1.22
SH2B3-201ENST00000341259 FLT4P35916 1363 aa22.68■■□□□ 1.22
SH2B3-201ENST00000341259 KRT18P05783 430 aaKnown RBP22.68■■□□□ 1.22
SH2B3-201ENST00000341259 MAGI3Q5TCQ9 1506 aa22.68■■□□□ 1.22
SH2B3-201ENST00000341259 GPTP24298 496 aa22.68■■□□□ 1.22
SH2B3-201ENST00000341259 TEX13AQ9BXU3 409 aaPredicted RBP22.68■■□□□ 1.22
SH2B3-201ENST00000341259 SLC5A1P13866 664 aa22.68■■□□□ 1.22
SH2B3-201ENST00000341259 RBM5P52756 815 aaKnown RBP eCLIP22.68■■□□□ 1.22
SH2B3-201ENST00000341259 UBE3BQ7Z3V4 1068 aa22.68■■□□□ 1.22
SH2B3-201ENST00000341259 ZNF771Q7L3S4 317 aaPredicted RBP22.67■■□□□ 1.22
SH2B3-201ENST00000341259 CCAR1Q8IX12 1150 aaKnown RBP22.67■■□□□ 1.22
SH2B3-201ENST00000341259 CEP57L1Q8IYX8 460 aa22.67■■□□□ 1.22
SH2B3-201ENST00000341259 ANKRD44Q8N8A2 993 aa22.67■■□□□ 1.22
SH2B3-201ENST00000341259 MAP3K11Q16584 847 aa22.66■■□□□ 1.22
SH2B3-201ENST00000341259 AKAP4Q5JQC9 854 aa22.66■■□□□ 1.22
SH2B3-201ENST00000341259 PHF23Q9BUL5 403 aaPredicted RBP22.66■■□□□ 1.22
SH2B3-201ENST00000341259 MAP3K12Q12852 859 aa22.66■■□□□ 1.22
SH2B3-201ENST00000341259 RHPN1Q8TCX5 695 aa22.66■■□□□ 1.22
SH2B3-201ENST00000341259 NAPBQ9H115 298 aa22.66■■□□□ 1.22
SH2B3-201ENST00000341259 ZMYM3Q14202 1370 aa22.66■■□□□ 1.22
SH2B3-201ENST00000341259 TEX35Q5T0J7 233 aa22.65■■□□□ 1.22
SH2B3-201ENST00000341259 DHX8Q14562 1220 aaKnown RBP22.64■■□□□ 1.22
SH2B3-201ENST00000341259 CAMK4Q16566 473 aa22.64■■□□□ 1.22
SH2B3-201ENST00000341259 SDSP20132 328 aa22.64■■□□□ 1.22
SH2B3-201ENST00000341259 ANKRD13DQ6ZTN6 518 aa22.64■■□□□ 1.22
SH2B3-201ENST00000341259 MINDY4BA8MYZ0 360 aa22.64■■□□□ 1.21
SH2B3-201ENST00000341259 TSPYL6Q8N831 410 aa22.64■■□□□ 1.21
SH2B3-201ENST00000341259 PIBF1Q8WXW3 757 aa22.64■■□□□ 1.21
SH2B3-201ENST00000341259 JARID2Q92833 1246 aaPredicted RBP22.64■■□□□ 1.21
SH2B3-201ENST00000341259 PHACTR3Q96KR7 559 aa22.64■■□□□ 1.21
SH2B3-201ENST00000341259 GOLIM4O00461 696 aa22.64■■□□□ 1.21
SH2B3-201ENST00000341259 VAMP4O75379 141 aa22.64■■□□□ 1.21
SH2B3-201ENST00000341259 LARP6Q9BRS8 491 aaKnown RBP22.64■■□□□ 1.21
SH2B3-201ENST00000341259 MSH6P52701 1360 aa22.64■■□□□ 1.21
SH2B3-201ENST00000341259 RLBP1P12271 317 aa22.64■■□□□ 1.21
SH2B3-201ENST00000341259 CAGE1Q8TC20 777 aa22.64■■□□□ 1.21
SH2B3-201ENST00000341259 GCC2Q8IWJ2 1684 aa22.63■■□□□ 1.21
SH2B3-201ENST00000341259 STIM1Q13586 685 aa22.63■■□□□ 1.21
SH2B3-201ENST00000341259 ZNF213O14771 459 aa22.63■■□□□ 1.21
SH2B3-201ENST00000341259 CBFA2T2O43439 604 aa22.63■■□□□ 1.21
SH2B3-201ENST00000341259 ADGBQ8N7X0 1667 aa22.63■■□□□ 1.21
SH2B3-201ENST00000341259 NCKAP5LQ9HCH0 1330 aa22.62■■□□□ 1.21
SH2B3-201ENST00000341259 SCAND2PQ9GZW5 306 aaPredicted RBP22.62■■□□□ 1.21
SH2B3-201ENST00000341259 CT47A1Q5JQC4 288 aaPredicted RBP22.61■■□□□ 1.21
SH2B3-201ENST00000341259 PPFIBP1Q86W92 1011 aa22.61■■□□□ 1.21
SH2B3-201ENST00000341259 TRPM2O94759 1503 aa22.61■■□□□ 1.21
SH2B3-201ENST00000341259 HMGN5P82970 282 aaKnown RBP22.61■■□□□ 1.21
SH2B3-201ENST00000341259 ATP8B2P98198 1209 aa22.61■■□□□ 1.21
SH2B3-201ENST00000341259 CCDC183Q5T5S1 534 aa22.61■■□□□ 1.21
SH2B3-201ENST00000341259 SF3B2Q13435 895 aaKnown RBP22.61■■□□□ 1.21
SH2B3-201ENST00000341259 XAGE3Q8WTP9 111 aa22.61■■□□□ 1.21
SH2B3-201ENST00000341259 NPC1L1Q9UHC9 1359 aa22.61■■□□□ 1.21
SH2B3-201ENST00000341259 LRRC59Q96AG4 307 aaKnown RBP22.61■■□□□ 1.21
SH2B3-201ENST00000341259 PDE1AP54750 535 aa22.6■■□□□ 1.21
SH2B3-201ENST00000341259 ZSCAN29Q8IWY8 852 aaPredicted RBP22.6■■□□□ 1.21
SH2B3-201ENST00000341259 CEP131Q9UPN4 1083 aa22.6■■□□□ 1.21
SH2B3-201ENST00000341259 USP5P45974 858 aa22.6■■□□□ 1.21
SH2B3-201ENST00000341259 ACBD3Q9H3P7 528 aa22.6■■□□□ 1.21
SH2B3-201ENST00000341259 SLC39A6Q13433 755 aa22.6■■□□□ 1.21
SH2B3-201ENST00000341259 NPHP3Q7Z494 1330 aa22.6■■□□□ 1.21
SH2B3-201ENST00000341259 C8orf76Q96K31 380 aa22.6■■□□□ 1.21
SH2B3-201ENST00000341259 RUFY1Q96T51 708 aa22.6■■□□□ 1.21
SH2B3-201ENST00000341259 ZCRB1Q8TBF4 217 aaKnown RBP22.6■■□□□ 1.21
SH2B3-201ENST00000341259 C8orf34Q49A92 452 aa22.59■■□□□ 1.21
SH2B3-201ENST00000341259 LDHAL6AQ6ZMR3 332 aa22.59■■□□□ 1.21
SH2B3-201ENST00000341259 PPP1R1BQ9UD71 204 aaPredicted RBP22.59■■□□□ 1.21
SH2B3-201ENST00000341259 ALDH1L1O75891 902 aa22.59■■□□□ 1.21
SH2B3-201ENST00000341259 ANKIB1Q9P2G1 1089 aa22.59■■□□□ 1.21
SH2B3-201ENST00000341259 GJB2P29033 226 aa22.59■■□□□ 1.21
SH2B3-201ENST00000341259 MAP3K5Q99683 1374 aa22.58■■□□□ 1.21
SH2B3-201ENST00000341259 KSR2Q6VAB6 950 aa22.58■■□□□ 1.21
SH2B3-201ENST00000341259 EYA1Q99502 592 aa22.58■■□□□ 1.21
SH2B3-201ENST00000341259 GUCY1B3Q02153 619 aa22.58■■□□□ 1.21
SH2B3-201ENST00000341259 SMTNL1A8MU46 457 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms