RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 MBIPQ9NS73 344 aa18.59■□□□□ 0.57
LIMK2-203ENST00000340552 KDRP35968 1356 aa18.58■□□□□ 0.57
LIMK2-203ENST00000340552 OGFRQ9NZT2 677 aa18.58■□□□□ 0.56
LIMK2-203ENST00000340552 STRCP1A6NGW2 1772 aa18.57■□□□□ 0.56
LIMK2-203ENST00000340552 LTN1O94822 1766 aa18.57■□□□□ 0.56
LIMK2-203ENST00000340552 C1orf167Q5SNV9 1468 aa18.57■□□□□ 0.56
LIMK2-203ENST00000340552 TMEM94Q12767 1356 aa18.57■□□□□ 0.56
LIMK2-203ENST00000340552 CTIFO43310 598 aaKnown RBP18.56■□□□□ 0.56
LIMK2-203ENST00000340552 KCNJ4P48050 445 aa18.56■□□□□ 0.56
LIMK2-203ENST00000340552 ALDH1L2Q3SY69 923 aa18.56■□□□□ 0.56
LIMK2-203ENST00000340552 ZNF428Q96B54 188 aa18.56■□□□□ 0.56
LIMK2-203ENST00000340552 ADCY5O95622 1261 aa18.55■□□□□ 0.56
LIMK2-203ENST00000340552 SLFN14P0C7P3 912 aa18.55■□□□□ 0.56
LIMK2-203ENST00000340552 LTV1Q96GA3 475 aaPredicted RBP18.55■□□□□ 0.56
LIMK2-203ENST00000340552 NFAT5O94916 1531 aa18.55■□□□□ 0.56
LIMK2-203ENST00000340552 RTL1A6NKG5 1358 aa18.55■□□□□ 0.56
LIMK2-203ENST00000340552 GABPB1Q06547 395 aaPredicted RBP18.55■□□□□ 0.56
LIMK2-203ENST00000340552 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
LIMK2-203ENST00000340552 KCNH5Q8NCM2 988 aa18.55■□□□□ 0.56
LIMK2-203ENST00000340552 DIAPH3Q9NSV4 1193 aa18.55■□□□□ 0.56
LIMK2-203ENST00000340552 GSPT1P15170 499 aaKnown RBP18.54■□□□□ 0.56
LIMK2-203ENST00000340552 ATF3P18847 181 aa18.54■□□□□ 0.56
LIMK2-203ENST00000340552 TSPYL6Q8N831 410 aa18.54■□□□□ 0.56
LIMK2-203ENST00000340552 VAMP4O75379 141 aa18.54■□□□□ 0.56
LIMK2-203ENST00000340552 MTHFSDQ2M296 383 aaKnown RBP18.54■□□□□ 0.56
LIMK2-203ENST00000340552 MCM10Q7L590 875 aa18.54■□□□□ 0.56
LIMK2-203ENST00000340552 USP26Q9BXU7 913 aa18.54■□□□□ 0.56
LIMK2-203ENST00000340552 KDM4FA0A1W2PPD8 638 aa18.53■□□□□ 0.56
LIMK2-203ENST00000340552 ELL2O00472 640 aaPredicted RBP18.53■□□□□ 0.56
LIMK2-203ENST00000340552 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
LIMK2-203ENST00000340552 KRT28Q7Z3Y7 464 aa18.53■□□□□ 0.56
LIMK2-203ENST00000340552 IP6K1Q92551 441 aa18.53■□□□□ 0.56
LIMK2-203ENST00000340552 GCC1Q96CN9 775 aa18.53■□□□□ 0.56
LIMK2-203ENST00000340552 KIF1AQ12756 1690 aa18.53■□□□□ 0.56
LIMK2-203ENST00000340552 NCBP1Q09161 790 aaKnown RBP18.52■□□□□ 0.56
LIMK2-203ENST00000340552 UVSSAQ2YD98 709 aa18.52■□□□□ 0.56
LIMK2-203ENST00000340552 C1orf115Q9H7X2 142 aa18.52■□□□□ 0.56
LIMK2-203ENST00000340552 CTNNA3Q9UI47 895 aa18.52■□□□□ 0.56
LIMK2-203ENST00000340552 TCHHQ07283 1943 aa18.52■□□□□ 0.56
LIMK2-203ENST00000340552 CHAF1AQ13111 956 aaPredicted RBP18.52■□□□□ 0.55
LIMK2-203ENST00000340552 IPO8O15397 1037 aaKnown RBP18.51■□□□□ 0.55
LIMK2-203ENST00000340552 TWISTNBQ3B726 338 aaPredicted RBP18.51■□□□□ 0.55
LIMK2-203ENST00000340552 KIAA1524Q8TCG1 905 aa18.51■□□□□ 0.55
LIMK2-203ENST00000340552 PYCARDQ9ULZ3 195 aa18.51■□□□□ 0.55
LIMK2-203ENST00000340552 TRPM3Q9HCF6 1732 aaPredicted RBP18.51■□□□□ 0.55
LIMK2-203ENST00000340552 MST1RQ04912 1400 aa18.51■□□□□ 0.55
LIMK2-203ENST00000340552 C8orf58Q8NAV2 365 aa18.51■□□□□ 0.55
LIMK2-203ENST00000340552 ST18O60284 1047 aa18.5■□□□□ 0.55
LIMK2-203ENST00000340552 SYAP1Q96A49 352 aaPredicted RBP18.5■□□□□ 0.55
LIMK2-203ENST00000340552 DCCP43146 1447 aa18.5■□□□□ 0.55
LIMK2-203ENST00000340552 GCP02774 474 aa18.5■□□□□ 0.55
LIMK2-203ENST00000340552 BRPF1P55201 1214 aaPredicted RBP18.5■□□□□ 0.55
LIMK2-203ENST00000340552 FAM184AQ8NB25 1140 aa18.5■□□□□ 0.55
LIMK2-203ENST00000340552 RTF1Q92541 710 aaKnown RBP18.5■□□□□ 0.55
LIMK2-203ENST00000340552 KCNF1Q9H3M0 494 aa18.5■□□□□ 0.55
LIMK2-203ENST00000340552 PAXIP1Q6ZW49 1069 aaPredicted RBP18.49■□□□□ 0.55
LIMK2-203ENST00000340552 CHL1O00533 1208 aa18.49■□□□□ 0.55
LIMK2-203ENST00000340552 GADD45BO75293 160 aaPredicted RBP18.48■□□□□ 0.55
LIMK2-203ENST00000340552 LMTK3Q96Q04 1460 aa18.48■□□□□ 0.55
LIMK2-203ENST00000340552 DDX41Q9UJV9 622 aaKnown RBP18.48■□□□□ 0.55
LIMK2-203ENST00000340552 SLIT3O75094 1523 aa18.48■□□□□ 0.55
LIMK2-203ENST00000340552 SIRT2Q8IXJ6 389 aa18.47■□□□□ 0.55
LIMK2-203ENST00000340552 MRPL50Q8N5N7 158 aaKnown RBP18.47■□□□□ 0.55
LIMK2-203ENST00000340552 USHBP1Q8N6Y0 703 aa18.47■□□□□ 0.55
LIMK2-203ENST00000340552 CRB1P82279 1406 aa18.47■□□□□ 0.55
LIMK2-203ENST00000340552 PHF14O94880 888 aa18.47■□□□□ 0.55
LIMK2-203ENST00000340552 BRD1O95696 1058 aa18.47■□□□□ 0.55
LIMK2-203ENST00000340552 CADPS2Q86UW7 1296 aa18.47■□□□□ 0.55
LIMK2-203ENST00000340552 PHRF1Q9P1Y6 1649 aaKnown RBP18.47■□□□□ 0.55
LIMK2-203ENST00000340552 SLC20A2Q08357 652 aa18.47■□□□□ 0.55
LIMK2-203ENST00000340552 ZBTB7BO15156 539 aaPredicted RBP18.46■□□□□ 0.55
LIMK2-203ENST00000340552 HCLS1P14317 486 aaPredicted RBP18.46■□□□□ 0.55
LIMK2-203ENST00000340552 TERF2Q15554 542 aa18.46■□□□□ 0.55
LIMK2-203ENST00000340552 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
LIMK2-203ENST00000340552 ARHGEF25Q86VW2 580 aa18.46■□□□□ 0.55
LIMK2-203ENST00000340552 GDPD2Q9HCC8 539 aa18.46■□□□□ 0.55
LIMK2-203ENST00000340552 CCDC66A2RUB6 948 aa18.46■□□□□ 0.55
LIMK2-203ENST00000340552 STRCQ7RTU9 1775 aa18.45■□□□□ 0.54
LIMK2-203ENST00000340552 PLEKHM2Q8IWE5 1019 aa18.45■□□□□ 0.54
LIMK2-203ENST00000340552 SMARCA5O60264 1052 aaPredicted RBP18.45■□□□□ 0.54
LIMK2-203ENST00000340552 NBPF6Q5VWK0 638 aa18.45■□□□□ 0.54
LIMK2-203ENST00000340552 NBPF4Q96M43 638 aa18.45■□□□□ 0.54
LIMK2-203ENST00000340552 TIGD1Q96MW7 591 aa18.45■□□□□ 0.54
LIMK2-203ENST00000340552 DNAJC2Q99543 621 aaKnown RBP18.45■□□□□ 0.54
LIMK2-203ENST00000340552 MSH6P52701 1360 aa18.44■□□□□ 0.54
LIMK2-203ENST00000340552 DDX17Q92841 729 aaKnown RBP18.44■□□□□ 0.54
LIMK2-203ENST00000340552 MORC2Q9Y6X9 1032 aaPredicted RBP18.44■□□□□ 0.54
LIMK2-203ENST00000340552 GNAT3A8MTJ3 354 aa18.44■□□□□ 0.54
LIMK2-203ENST00000340552 HTATSF1O43719 755 aaKnown RBP18.44■□□□□ 0.54
LIMK2-203ENST00000340552 CAPN2P17655 700 aa18.44■□□□□ 0.54
LIMK2-203ENST00000340552 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
LIMK2-203ENST00000340552 FOXD4L6Q3SYB3 417 aaPredicted RBP18.44■□□□□ 0.54
LIMK2-203ENST00000340552 FOXD4L3Q6VB84 417 aaPredicted RBP18.44■□□□□ 0.54
LIMK2-203ENST00000340552 KDM4AO75164 1064 aa18.43■□□□□ 0.54
LIMK2-203ENST00000340552 NAA30Q147X3 362 aaPredicted RBP18.43■□□□□ 0.54
LIMK2-203ENST00000340552 ALS2Q96Q42 1657 aa18.43■□□□□ 0.54
LIMK2-203ENST00000340552 AP5Z1O43299 807 aa18.43■□□□□ 0.54
LIMK2-203ENST00000340552 TTC22Q5TAA0 569 aa18.43■□□□□ 0.54
LIMK2-203ENST00000340552 ARHGAP45Q92619 1136 aa18.43■□□□□ 0.54
LIMK2-203ENST00000340552 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms