RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 CSPP1Q1MSJ5 1256 aa19.41■□□□□ 0.7
SCARB1-202ENST00000339570 ZHX1Q9UKY1 873 aaPredicted RBP19.41■□□□□ 0.7
SCARB1-202ENST00000339570 SASS6Q6UVJ0 657 aa19.41■□□□□ 0.7
SCARB1-202ENST00000339570 SNX14Q9Y5W7 946 aa19.41■□□□□ 0.7
SCARB1-202ENST00000339570 CEBPAP49715 358 aaPredicted RBP19.41■□□□□ 0.7
SCARB1-202ENST00000339570 DIAPH3Q9NSV4 1193 aa19.41■□□□□ 0.7
SCARB1-202ENST00000339570 ANKRD26Q9UPS8 1709 aa19.41■□□□□ 0.7
SCARB1-202ENST00000339570 SOS1Q07889 1333 aaPredicted RBP19.41■□□□□ 0.7
SCARB1-202ENST00000339570 TCHHQ07283 1943 aa19.4■□□□□ 0.7
SCARB1-202ENST00000339570 CUL4AQ13619 759 aa19.4■□□□□ 0.7
SCARB1-202ENST00000339570 STX6O43752 255 aa19.4■□□□□ 0.7
SCARB1-202ENST00000339570 ADCK5Q3MIX3 580 aa19.4■□□□□ 0.7
SCARB1-202ENST00000339570 RHPN1Q8TCX5 695 aa19.4■□□□□ 0.7
SCARB1-202ENST00000339570 OSBPL3Q9H4L5 887 aa19.4■□□□□ 0.7
SCARB1-202ENST00000339570 CBX1P83916 185 aa19.4■□□□□ 0.7
SCARB1-202ENST00000339570 COL9A3Q14050 684 aaPredicted RBP19.4■□□□□ 0.7
SCARB1-202ENST00000339570 AATKQ6ZMQ8 1374 aa19.39■□□□□ 0.7
SCARB1-202ENST00000339570 PHF14O94880 888 aa19.39■□□□□ 0.69
SCARB1-202ENST00000339570 HS1BP3Q53T59 392 aa19.39■□□□□ 0.69
SCARB1-202ENST00000339570 RUFY3Q7L099 469 aa19.39■□□□□ 0.69
SCARB1-202ENST00000339570 CKAP2LQ8IYA6 745 aa19.39■□□□□ 0.69
SCARB1-202ENST00000339570 KCNQ3O43525 872 aa19.39■□□□□ 0.69
SCARB1-202ENST00000339570 GJB2P29033 226 aa19.39■□□□□ 0.69
SCARB1-202ENST00000339570 SIL1Q9H173 461 aa19.39■□□□□ 0.69
SCARB1-202ENST00000339570 PI4KAP2A4QPH2 592 aa19.38■□□□□ 0.69
SCARB1-202ENST00000339570 PI4KAP1Q8N8J0 262 aa19.38■□□□□ 0.69
SCARB1-202ENST00000339570 IL17REQ8NFR9 667 aa19.38■□□□□ 0.69
SCARB1-202ENST00000339570 TFIP11Q9UBB9 837 aaKnown RBP19.38■□□□□ 0.69
SCARB1-202ENST00000339570 KIF24Q5T7B8 1368 aa19.38■□□□□ 0.69
SCARB1-202ENST00000339570 ROBO2Q9HCK4 1378 aa19.38■□□□□ 0.69
SCARB1-202ENST00000339570 ARHGAP31Q2M1Z3 1444 aa19.38■□□□□ 0.69
SCARB1-202ENST00000339570 GNAT3A8MTJ3 354 aa19.38■□□□□ 0.69
SCARB1-202ENST00000339570 ZSCAN22P10073 491 aaPredicted RBP19.38■□□□□ 0.69
SCARB1-202ENST00000339570 PTH1RQ03431 593 aa19.38■□□□□ 0.69
SCARB1-202ENST00000339570 NOLC1Q14978 699 aaKnown RBP eCLIP19.38■□□□□ 0.695e-9■■■■■ 28.5
SCARB1-202ENST00000339570 DRC7Q8IY82 874 aa19.38■□□□□ 0.69
SCARB1-202ENST00000339570 SPDYE4A6NLX3 237 aa19.37■□□□□ 0.69
SCARB1-202ENST00000339570 IGSF3O75054 1194 aa19.37■□□□□ 0.69
SCARB1-202ENST00000339570 AIMP1Q12904 312 aaKnown RBP19.37■□□□□ 0.69
SCARB1-202ENST00000339570 KIAA0232Q92628 1395 aa19.37■□□□□ 0.69
SCARB1-202ENST00000339570 CCDC183Q5T5S1 534 aa19.37■□□□□ 0.69
SCARB1-202ENST00000339570 FBXW7Q969H0 707 aa19.37■□□□□ 0.69
SCARB1-202ENST00000339570 CHPF2Q9P2E5 772 aa19.37■□□□□ 0.69
SCARB1-202ENST00000339570 CRB1P82279 1406 aa19.37■□□□□ 0.69
SCARB1-202ENST00000339570 LMOD2Q6P5Q4 547 aa19.36■□□□□ 0.69
SCARB1-202ENST00000339570 PREX1Q8TCU6 1659 aa19.36■□□□□ 0.69
SCARB1-202ENST00000339570 HSPA4P34932 840 aa19.36■□□□□ 0.69
SCARB1-202ENST00000339570 RIMS1Q86UR5 1692 aaKnown RBP19.36■□□□□ 0.69
SCARB1-202ENST00000339570 CEBPZQ03701 1054 aaKnown RBP19.35■□□□□ 0.69
SCARB1-202ENST00000339570 CNTROBQ8N137 903 aa19.35■□□□□ 0.69
SCARB1-202ENST00000339570 CDC42BPGQ6DT37 1551 aa19.35■□□□□ 0.69
SCARB1-202ENST00000339570 A2ML1A8K2U0 1454 aa19.35■□□□□ 0.69
SCARB1-202ENST00000339570 SALL3Q9BXA9 1300 aa19.35■□□□□ 0.69
SCARB1-202ENST00000339570 INTS4Q96HW7 963 aaKnown RBP19.35■□□□□ 0.69
SCARB1-202ENST00000339570 CCDC8Q9H0W5 538 aaPredicted RBP19.35■□□□□ 0.69
SCARB1-202ENST00000339570 LGR6Q9HBX8 967 aa19.35■□□□□ 0.69
SCARB1-202ENST00000339570 LIMCH1Q9UPQ0 1083 aa19.35■□□□□ 0.69
SCARB1-202ENST00000339570 PDRG1Q9NUG6 133 aa19.34■□□□□ 0.69
SCARB1-202ENST00000339570 F13A1P00488 732 aa19.34■□□□□ 0.69
SCARB1-202ENST00000339570 SETD1BQ9UPS6 1966 aaKnown RBP19.34■□□□□ 0.69
SCARB1-202ENST00000339570 RPAP1Q9BWH6 1393 aaPredicted RBP19.34■□□□□ 0.69
SCARB1-202ENST00000339570 SGSM2O43147 1006 aa19.33■□□□□ 0.69
SCARB1-202ENST00000339570 AP5Z1O43299 807 aa19.33■□□□□ 0.69
SCARB1-202ENST00000339570 NDUFB9Q9Y6M9 179 aa19.33■□□□□ 0.69
SCARB1-202ENST00000339570 ABTB2Q8N961 1025 aa19.33■□□□□ 0.69
SCARB1-202ENST00000339570 C9orf78Q9NZ63 289 aaPredicted RBP19.33■□□□□ 0.69
SCARB1-202ENST00000339570 PYCARDQ9ULZ3 195 aa19.33■□□□□ 0.69
SCARB1-202ENST00000339570 DYNC1I1O14576 645 aa19.32■□□□□ 0.68
SCARB1-202ENST00000339570 ANAPC15P60006 121 aa19.32■□□□□ 0.68
SCARB1-202ENST00000339570 KLHDC4Q8TBB5 520 aa19.32■□□□□ 0.68
SCARB1-202ENST00000339570 CWF19L2Q2TBE0 894 aaKnown RBP19.32■□□□□ 0.68
SCARB1-202ENST00000339570 MPRIPQ6WCQ1 1025 aa19.32■□□□□ 0.68
SCARB1-202ENST00000339570 PI4K2BQ8TCG2 481 aa19.32■□□□□ 0.68
SCARB1-202ENST00000339570 NAP1L2Q9ULW6 460 aaPredicted RBP19.32■□□□□ 0.68
SCARB1-202ENST00000339570 GOLGA6L4A6NEF3 574 aa19.31■□□□□ 0.68
SCARB1-202ENST00000339570 FAM227BQ96M60 508 aa19.31■□□□□ 0.68
SCARB1-202ENST00000339570 IFIT2P09913 472 aaKnown RBP19.31■□□□□ 0.68
SCARB1-202ENST00000339570 LTKP29376 864 aa19.31■□□□□ 0.68
SCARB1-202ENST00000339570 LUZP1Q86V48 1076 aa19.31■□□□□ 0.68
SCARB1-202ENST00000339570 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.31■□□□□ 0.68
SCARB1-202ENST00000339570 LSG1Q9H089 658 aaKnown RBP19.31■□□□□ 0.68
SCARB1-202ENST00000339570 UBE2HP62256 183 aa19.3■□□□□ 0.68
SCARB1-202ENST00000339570 LARP1BQ659C4 914 aaKnown RBP19.3■□□□□ 0.68
SCARB1-202ENST00000339570 AACSQ86V21 672 aa19.3■□□□□ 0.68
SCARB1-202ENST00000339570 RAD50Q92878 1312 aa19.3■□□□□ 0.68
SCARB1-202ENST00000339570 EDC3Q96F86 508 aaKnown RBP19.3■□□□□ 0.68
SCARB1-202ENST00000339570 DDX11Q96FC9 970 aa19.3■□□□□ 0.68
SCARB1-202ENST00000339570 BOLA2Q9H3K6 86 aa19.3■□□□□ 0.68
SCARB1-202ENST00000339570 A0A087WWV3 80 aa19.3■□□□□ 0.68
SCARB1-202ENST00000339570 PRAMEF22A3QJZ6 481 aa19.3■□□□□ 0.68
SCARB1-202ENST00000339570 KIF1BPQ96EK5 621 aa19.3■□□□□ 0.68
SCARB1-202ENST00000339570 KDM4AO75164 1064 aa19.29■□□□□ 0.68
SCARB1-202ENST00000339570 ZNF592Q92610 1267 aa19.29■□□□□ 0.68
SCARB1-202ENST00000339570 AMOTL2Q9Y2J4 779 aa19.29■□□□□ 0.68
SCARB1-202ENST00000339570 TAF6LQ9Y6J9 622 aa19.29■□□□□ 0.68
SCARB1-202ENST00000339570 RAB11FIP3O75154 756 aa19.28■□□□□ 0.68
SCARB1-202ENST00000339570 MCM5P33992 734 aa19.28■□□□□ 0.68
SCARB1-202ENST00000339570 ME3Q16798 604 aa19.28■□□□□ 0.68
SCARB1-202ENST00000339570 PPP4R3BQ5MIZ7 849 aa19.28■□□□□ 0.68
SCARB1-202ENST00000339570 CLASRPQ8N2M8 674 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms