RNA–Protein interactions for RNA: ENST00000339251.9

MUC4-202, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-202ENST00000339251 WASLO00401 505 aaPredicted RBP13.68□□□□□ -0.22
MUC4-202ENST00000339251 PRDM4Q9UKN5 801 aa13.68□□□□□ -0.22
MUC4-202ENST00000339251 NAP1L2Q9ULW6 460 aaPredicted RBP13.68□□□□□ -0.22
MUC4-202ENST00000339251 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
MUC4-202ENST00000339251 PNMA6EA0A0J9YXQ4 647 aa13.67□□□□□ -0.22
MUC4-202ENST00000339251 U2AF2P26368 475 aaKnown RBP eCLIP13.67□□□□□ -0.22
MUC4-202ENST00000339251 ATP8B2P98198 1209 aa13.67□□□□□ -0.22
MUC4-202ENST00000339251 CCDC112Q8NEF3 446 aa13.67□□□□□ -0.22
MUC4-202ENST00000339251 SRGAP3O43295 1099 aa13.67□□□□□ -0.22
MUC4-202ENST00000339251 DMTNQ08495 405 aa13.67□□□□□ -0.22
MUC4-202ENST00000339251 GTPBP4Q9BZE4 634 aaKnown RBP13.67□□□□□ -0.22
MUC4-202ENST00000339251 OSBPL3Q9H4L5 887 aa13.67□□□□□ -0.22
MUC4-202ENST00000339251 PTGS1P23219 599 aa13.67□□□□□ -0.22
MUC4-202ENST00000339251 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
MUC4-202ENST00000339251 PPRC1Q5VV67 1664 aaKnown RBP13.66□□□□□ -0.22
MUC4-202ENST00000339251 KIF13AQ9H1H9 1805 aa13.66□□□□□ -0.22
MUC4-202ENST00000339251 FOXO3O43524 673 aa13.66□□□□□ -0.22
MUC4-202ENST00000339251 CCDC186Q7Z3E2 898 aa13.66□□□□□ -0.22
MUC4-202ENST00000339251 UNC5CLQ8IV45 518 aa13.66□□□□□ -0.22
MUC4-202ENST00000339251 USP32Q8NFA0 1604 aa13.66□□□□□ -0.22
MUC4-202ENST00000339251 BECN2A8MW95 431 aa13.66□□□□□ -0.22
MUC4-202ENST00000339251 IFIT2P09913 472 aaKnown RBP13.66□□□□□ -0.22
MUC4-202ENST00000339251 HSP90AB2PQ58FF8 381 aa13.66□□□□□ -0.22
MUC4-202ENST00000339251 PYCARDQ9ULZ3 195 aa13.66□□□□□ -0.22
MUC4-202ENST00000339251 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
MUC4-202ENST00000339251 TNNT1P13805 278 aa13.65□□□□□ -0.22
MUC4-202ENST00000339251 HSP90B1P14625 803 aaKnown RBP13.65□□□□□ -0.22
MUC4-202ENST00000339251 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
MUC4-202ENST00000339251 H3BQV1 296 aa13.65□□□□□ -0.23
MUC4-202ENST00000339251 IFFO2Q5TF58 517 aa13.65□□□□□ -0.23
MUC4-202ENST00000339251 ZSCAN31Q96LW9 406 aaPredicted RBP13.65□□□□□ -0.23
MUC4-202ENST00000339251 DEPDC5O75140 1603 aa13.65□□□□□ -0.23
MUC4-202ENST00000339251 REREQ9P2R6 1566 aa13.64□□□□□ -0.23
MUC4-202ENST00000339251 TFIP11Q9UBB9 837 aaKnown RBP13.64□□□□□ -0.23
MUC4-202ENST00000339251 RGS12O14924 1447 aa13.64□□□□□ -0.23
MUC4-202ENST00000339251 STK3Q13188 491 aa13.64□□□□□ -0.23
MUC4-202ENST00000339251 HDGFL1Q5TGJ6 251 aa13.64□□□□□ -0.23
MUC4-202ENST00000339251 CLASRPQ8N2M8 674 aaKnown RBP13.64□□□□□ -0.23
MUC4-202ENST00000339251 SPATA32Q96LK8 384 aa13.64□□□□□ -0.23
MUC4-202ENST00000339251 SNX14Q9Y5W7 946 aa13.64□□□□□ -0.23
MUC4-202ENST00000339251 VWDEQ8N2E2 1590 aa13.64□□□□□ -0.23
MUC4-202ENST00000339251 HSPA4P34932 840 aa13.63□□□□□ -0.23
MUC4-202ENST00000339251 PPP1R42Q7Z4L9 355 aa13.63□□□□□ -0.23
MUC4-202ENST00000339251 FAM200AQ8TCP9 573 aa13.63□□□□□ -0.23
MUC4-202ENST00000339251 FBXW7Q969H0 707 aa13.63□□□□□ -0.23
MUC4-202ENST00000339251 NEURL4Q96JN8 1562 aa13.63□□□□□ -0.23
MUC4-202ENST00000339251 ATP10DQ9P241 1426 aa13.63□□□□□ -0.23
MUC4-202ENST00000339251 NPHP1O15259 732 aa13.63□□□□□ -0.23
MUC4-202ENST00000339251 PDCP20941 246 aa13.63□□□□□ -0.23
MUC4-202ENST00000339251 HSP90AB4PQ58FF6 505 aa13.63□□□□□ -0.23
MUC4-202ENST00000339251 FOSBP53539 338 aa13.63□□□□□ -0.23
MUC4-202ENST00000339251 LUZP1Q86V48 1076 aa13.63□□□□□ -0.23
MUC4-202ENST00000339251 KIF1BPQ96EK5 621 aa13.63□□□□□ -0.23
MUC4-202ENST00000339251 ATP2B3Q16720 1220 aa13.62□□□□□ -0.23
MUC4-202ENST00000339251 RAB11FIP3O75154 756 aa13.62□□□□□ -0.23
MUC4-202ENST00000339251 UTP14CQ5TAP6 766 aaKnown RBP13.62□□□□□ -0.23
MUC4-202ENST00000339251 RHPN1Q8TCX5 695 aa13.62□□□□□ -0.23
MUC4-202ENST00000339251 ARAP3Q8WWN8 1544 aa13.62□□□□□ -0.23
MUC4-202ENST00000339251 CEBPZQ03701 1054 aaKnown RBP13.62□□□□□ -0.23
MUC4-202ENST00000339251 TYRO3Q06418 890 aa13.62□□□□□ -0.23
MUC4-202ENST00000339251 NGDNQ8NEJ9 315 aaKnown RBP13.62□□□□□ -0.23
MUC4-202ENST00000339251 INO80Q9ULG1 1556 aaPredicted RBP13.62□□□□□ -0.23
MUC4-202ENST00000339251 ANO6Q4KMQ2 910 aa13.61□□□□□ -0.23
MUC4-202ENST00000339251 KIAA1524Q8TCG1 905 aa13.61□□□□□ -0.23
MUC4-202ENST00000339251 SH2B1Q9NRF2 756 aaPredicted RBP13.61□□□□□ -0.23
MUC4-202ENST00000339251 C9orf78Q9NZ63 289 aaPredicted RBP13.61□□□□□ -0.23
MUC4-202ENST00000339251 NRDCO43847 1150 aa13.61□□□□□ -0.23
MUC4-202ENST00000339251 ZNF710Q8N1W2 664 aa13.61□□□□□ -0.23
MUC4-202ENST00000339251 CGNQ9P2M7 1197 aaKnown RBP13.61□□□□□ -0.23
MUC4-202ENST00000339251 CLIP2Q9UDT6 1046 aa13.61□□□□□ -0.23
MUC4-202ENST00000339251 FAM173BQ6P4H8 233 aa13.61□□□□□ -0.23
MUC4-202ENST00000339251 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
MUC4-202ENST00000339251 TAOK2Q9UL54 1235 aa13.61□□□□□ -0.23
MUC4-202ENST00000339251 KIDINS220Q9ULH0 1771 aa13.61□□□□□ -0.23
MUC4-202ENST00000339251 ABCC3O15438 1527 aa13.61□□□□□ -0.23
MUC4-202ENST00000339251 HDGFP51858 240 aaKnown RBP13.6□□□□□ -0.23
MUC4-202ENST00000339251 MTHFSDQ2M296 383 aaKnown RBP13.6□□□□□ -0.23
MUC4-202ENST00000339251 DACT1Q9NYF0 836 aa13.6□□□□□ -0.23
MUC4-202ENST00000339251 RAD50Q92878 1312 aa13.6□□□□□ -0.23
MUC4-202ENST00000339251 SGSM2O43147 1006 aa13.6□□□□□ -0.23
MUC4-202ENST00000339251 PSMA5P28066 241 aa13.6□□□□□ -0.23
MUC4-202ENST00000339251 RNF20Q5VTR2 975 aa13.6□□□□□ -0.23
MUC4-202ENST00000339251 RUFY3Q7L099 469 aa13.6□□□□□ -0.23
MUC4-202ENST00000339251 EDC4Q6P2E9 1401 aaKnown RBP13.6□□□□□ -0.23
MUC4-202ENST00000339251 GLRX3O76003 335 aaKnown RBP13.6□□□□□ -0.23
MUC4-202ENST00000339251 FILIP1Q7Z7B0 1213 aa13.6□□□□□ -0.23
MUC4-202ENST00000339251 ZC3H13Q5T200 1668 aaKnown RBP13.6□□□□□ -0.23
MUC4-202ENST00000339251 KIF20AO95235 890 aa13.59□□□□□ -0.23
MUC4-202ENST00000339251 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
MUC4-202ENST00000339251 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
MUC4-202ENST00000339251 ZNF165P49910 485 aa13.59□□□□□ -0.23
MUC4-202ENST00000339251 TCEANC2Q96MN5 208 aa13.59□□□□□ -0.23
MUC4-202ENST00000339251 SSH2Q76I76 1423 aa13.59□□□□□ -0.23
MUC4-202ENST00000339251 ZSCAN20P17040 1043 aaPredicted RBP13.59□□□□□ -0.23
MUC4-202ENST00000339251 BLOC1S2Q6QNY1 142 aa13.59□□□□□ -0.23
MUC4-202ENST00000339251 SPTLC3Q9NUV7 552 aa13.59□□□□□ -0.23
MUC4-202ENST00000339251 SOS1Q07889 1333 aaPredicted RBP13.59□□□□□ -0.23
MUC4-202ENST00000339251 LRMPQ12912 555 aa13.58□□□□□ -0.23
MUC4-202ENST00000339251 HECW2Q9P2P5 1572 aa13.58□□□□□ -0.23
MUC4-202ENST00000339251 MLH3Q9UHC1 1453 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms