RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 TOM1O60784 492 aa18.39■□□□□ 0.53
TNFSF13-201ENST00000338784 MCM2P49736 904 aa18.39■□□□□ 0.53
TNFSF13-201ENST00000338784 NEK4P51957 841 aa18.39■□□□□ 0.53
TNFSF13-201ENST00000338784 ANAPC15P60006 121 aa18.39■□□□□ 0.53
TNFSF13-201ENST00000338784 ZNF530Q6P9A1 599 aaPredicted RBP18.39■□□□□ 0.53
TNFSF13-201ENST00000338784 ZGPATQ8N5A5 531 aaKnown RBP18.39■□□□□ 0.53
TNFSF13-201ENST00000338784 DDX49Q9Y6V7 483 aaKnown RBP18.39■□□□□ 0.53
TNFSF13-201ENST00000338784 N4BP2Q86UW6 1770 aaPredicted RBP18.38■□□□□ 0.53
TNFSF13-201ENST00000338784 SURF6O75683 361 aaKnown RBP18.38■□□□□ 0.53
TNFSF13-201ENST00000338784 AMOTQ4VCS5 1084 aa18.38■□□□□ 0.53
TNFSF13-201ENST00000338784 DNAAF4Q8WXU2 420 aa18.38■□□□□ 0.53
TNFSF13-201ENST00000338784 LRRC59Q96AG4 307 aaKnown RBP18.38■□□□□ 0.53
TNFSF13-201ENST00000338784 IL1RAPL2Q9NP60 686 aa18.38■□□□□ 0.53
TNFSF13-201ENST00000338784 ANO2Q9NQ90 1003 aa18.38■□□□□ 0.53
TNFSF13-201ENST00000338784 BEND3Q5T5X7 828 aa18.37■□□□□ 0.53
TNFSF13-201ENST00000338784 MCTP1Q6DN14 999 aa18.37■□□□□ 0.53
TNFSF13-201ENST00000338784 GAS2L3Q86XJ1 694 aa18.37■□□□□ 0.53
TNFSF13-201ENST00000338784 PI4KAP2A4QPH2 592 aa18.37■□□□□ 0.53
TNFSF13-201ENST00000338784 SRGAP3O43295 1099 aa18.37■□□□□ 0.53
TNFSF13-201ENST00000338784 KCNQ3O43525 872 aa18.37■□□□□ 0.53
TNFSF13-201ENST00000338784 PIP4K2BP78356 416 aa18.37■□□□□ 0.53
TNFSF13-201ENST00000338784 PKP1Q13835 747 aa18.37■□□□□ 0.53
TNFSF13-201ENST00000338784 PI4KAP1Q8N8J0 262 aa18.37■□□□□ 0.53
TNFSF13-201ENST00000338784 NBPF7P0C2Y1 421 aaPredicted RBP18.36■□□□□ 0.53
TNFSF13-201ENST00000338784 MPRIPQ6WCQ1 1025 aa18.36■□□□□ 0.53
TNFSF13-201ENST00000338784 UNC5CLQ8IV45 518 aa18.36■□□□□ 0.53
TNFSF13-201ENST00000338784 RHPN1Q8TCX5 695 aa18.36■□□□□ 0.53
TNFSF13-201ENST00000338784 GCP02774 474 aa18.35■□□□□ 0.53
TNFSF13-201ENST00000338784 NUTM1Q86Y26 1132 aa18.35■□□□□ 0.53
TNFSF13-201ENST00000338784 KIF1BPQ96EK5 621 aa18.35■□□□□ 0.53
TNFSF13-201ENST00000338784 TMX3Q96JJ7 454 aa18.35■□□□□ 0.53
TNFSF13-201ENST00000338784 RRAGDQ9NQL2 400 aaPredicted RBP18.35■□□□□ 0.53
TNFSF13-201ENST00000338784 EPB41L2O43491 1005 aaKnown RBP18.35■□□□□ 0.53
TNFSF13-201ENST00000338784 C1orf141Q5JVX7 400 aa18.35■□□□□ 0.53
TNFSF13-201ENST00000338784 ARHGEF25Q86VW2 580 aa18.35■□□□□ 0.53
TNFSF13-201ENST00000338784 PALD1Q9ULE6 856 aa18.35■□□□□ 0.53
TNFSF13-201ENST00000338784 HSPA1LP34931 641 aa18.34■□□□□ 0.53
TNFSF13-201ENST00000338784 IL17RAQ96F46 866 aa18.34■□□□□ 0.53
TNFSF13-201ENST00000338784 RNMTO43148 476 aaKnown RBP18.33■□□□□ 0.53
TNFSF13-201ENST00000338784 HSP90AB4PQ58FF6 505 aa18.33■□□□□ 0.53
TNFSF13-201ENST00000338784 LMBRD1Q9NUN5 540 aa18.33■□□□□ 0.53
TNFSF13-201ENST00000338784 DBF4Q9UBU7 674 aaPredicted RBP18.33■□□□□ 0.53
TNFSF13-201ENST00000338784 PHRF1Q9P1Y6 1649 aaKnown RBP18.33■□□□□ 0.53
TNFSF13-201ENST00000338784 KIF1AQ12756 1690 aa18.33■□□□□ 0.52
TNFSF13-201ENST00000338784 NCAPD2Q15021 1401 aa18.33■□□□□ 0.52
TNFSF13-201ENST00000338784 ZDHHC9Q9Y397 364 aa18.33■□□□□ 0.52
TNFSF13-201ENST00000338784 TUBGCP6Q96RT7 1819 aa18.32■□□□□ 0.52
TNFSF13-201ENST00000338784 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
TNFSF13-201ENST00000338784 PI4K2BQ8TCG2 481 aa18.32■□□□□ 0.52
TNFSF13-201ENST00000338784 ORAI2Q96SN7 254 aa18.32■□□□□ 0.52
TNFSF13-201ENST00000338784 ADCY9O60503 1353 aa18.32■□□□□ 0.52
TNFSF13-201ENST00000338784 ANXA1P04083 346 aa18.31■□□□□ 0.52
TNFSF13-201ENST00000338784 CUL4AQ13619 759 aa18.31■□□□□ 0.52
TNFSF13-201ENST00000338784 ANKRD24Q8TF21 1146 aa18.31■□□□□ 0.52
TNFSF13-201ENST00000338784 LMO7Q8WWI1 1683 aa18.3■□□□□ 0.52
TNFSF13-201ENST00000338784 OVOS2A0A0G2JMS6 1433 aa18.3■□□□□ 0.52
TNFSF13-201ENST00000338784 XPCQ01831 940 aaPredicted RBP18.3■□□□□ 0.52
TNFSF13-201ENST00000338784 GIGYF1O75420 1035 aaPredicted RBP18.3■□□□□ 0.52
TNFSF13-201ENST00000338784 LMOD2Q6P5Q4 547 aa18.3■□□□□ 0.52
TNFSF13-201ENST00000338784 CNTROBQ8N137 903 aa18.3■□□□□ 0.52
TNFSF13-201ENST00000338784 INTS4Q96HW7 963 aaKnown RBP18.3■□□□□ 0.52
TNFSF13-201ENST00000338784 ALDH1L1O75891 902 aa18.29■□□□□ 0.52
TNFSF13-201ENST00000338784 NCLP19338 710 aaKnown RBP18.29■□□□□ 0.52
TNFSF13-201ENST00000338784 HSPA4P34932 840 aa18.29■□□□□ 0.52
TNFSF13-201ENST00000338784 MTX1Q13505 466 aa18.29■□□□□ 0.52
TNFSF13-201ENST00000338784 IL25Q9H293 177 aa18.29■□□□□ 0.52
TNFSF13-201ENST00000338784 PXDNQ92626 1479 aa18.29■□□□□ 0.52
TNFSF13-201ENST00000338784 SLIT3O75094 1523 aa18.29■□□□□ 0.52
TNFSF13-201ENST00000338784 TRPM3Q9HCF6 1732 aaPredicted RBP18.28■□□□□ 0.52
TNFSF13-201ENST00000338784 PRPF40AO75400 957 aaKnown RBP18.28■□□□□ 0.52
TNFSF13-201ENST00000338784 MAP4K4O95819 1239 aaPredicted RBP18.28■□□□□ 0.52
TNFSF13-201ENST00000338784 MAP3K2Q9Y2U5 619 aa18.28■□□□□ 0.52
TNFSF13-201ENST00000338784 ZNF445P59923 1031 aa18.28■□□□□ 0.52
TNFSF13-201ENST00000338784 OS9Q13438 667 aaPredicted RBP18.28■□□□□ 0.52
TNFSF13-201ENST00000338784 CAVIN1Q6NZI2 390 aaKnown RBP18.28■□□□□ 0.52
TNFSF13-201ENST00000338784 KSR2Q6VAB6 950 aa18.28■□□□□ 0.52
TNFSF13-201ENST00000338784 ANO8Q9HCE9 1232 aaPredicted RBP18.28■□□□□ 0.52
TNFSF13-201ENST00000338784 C9orf78Q9NZ63 289 aaPredicted RBP18.28■□□□□ 0.52
TNFSF13-201ENST00000338784 HDAC5Q9UQL6 1122 aa18.28■□□□□ 0.52
TNFSF13-201ENST00000338784 HEG1Q9ULI3 1381 aa18.27■□□□□ 0.52
TNFSF13-201ENST00000338784 SGSM2O43147 1006 aa18.27■□□□□ 0.52
TNFSF13-201ENST00000338784 TTC41PQ6P2S7 1318 aa18.26■□□□□ 0.51
TNFSF13-201ENST00000338784 USP42Q9H9J4 1324 aaKnown RBP18.26■□□□□ 0.51
TNFSF13-201ENST00000338784 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
TNFSF13-201ENST00000338784 RAD50Q92878 1312 aa18.26■□□□□ 0.51
TNFSF13-201ENST00000338784 BRD1O95696 1058 aa18.26■□□□□ 0.51
TNFSF13-201ENST00000338784 NASPP49321 788 aaPredicted RBP18.26■□□□□ 0.51
TNFSF13-201ENST00000338784 ZSCAN23Q3MJ62 389 aa18.26■□□□□ 0.51
TNFSF13-201ENST00000338784 NOL8Q76FK4 1167 aaKnown RBP18.26■□□□□ 0.51
TNFSF13-201ENST00000338784 TRIM44Q96DX7 344 aaPredicted RBP18.26■□□□□ 0.51
TNFSF13-201ENST00000338784 HYPKQ9NX55 129 aa18.26■□□□□ 0.51
TNFSF13-201ENST00000338784 AXIN2Q9Y2T1 843 aa18.26■□□□□ 0.51
TNFSF13-201ENST00000338784 DCCP43146 1447 aa18.25■□□□□ 0.51
TNFSF13-201ENST00000338784 RGPD2P0DJD1 1756 aa18.25■□□□□ 0.51
TNFSF13-201ENST00000338784 GLRX3O76003 335 aaKnown RBP18.25■□□□□ 0.51
TNFSF13-201ENST00000338784 CLCN1P35523 988 aa18.25■□□□□ 0.51
TNFSF13-201ENST00000338784 PROSER3Q2NL68 480 aa18.25■□□□□ 0.51
TNFSF13-201ENST00000338784 CLASRPQ8N2M8 674 aaKnown RBP18.25■□□□□ 0.51
TNFSF13-201ENST00000338784 AK9Q5TCS8 1911 aa18.25■□□□□ 0.51
TNFSF13-201ENST00000338784 STRCP1A6NGW2 1772 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms