RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 ARHGEF1Q92888 912 aaKnown RBP14.85□□□□□ -0.03
SLC28A1-202ENST00000338602 RRP7AQ9Y3A4 280 aaKnown RBP14.85□□□□□ -0.03
SLC28A1-202ENST00000338602 COL5A3P25940 1745 aaPredicted RBP14.84□□□□□ -0.03
SLC28A1-202ENST00000338602 KCNQ3O43525 872 aa14.84□□□□□ -0.03
SLC28A1-202ENST00000338602 SMIM5Q71RC9 77 aa14.84□□□□□ -0.03
SLC28A1-202ENST00000338602 AMIGO3Q86WK7 504 aa14.84□□□□□ -0.03
SLC28A1-202ENST00000338602 THUMPD2Q9BTF0 503 aaKnown RBP14.84□□□□□ -0.03
SLC28A1-202ENST00000338602 BABAM1Q9NWV8 329 aa14.84□□□□□ -0.03
SLC28A1-202ENST00000338602 CICQ96RK0 1608 aaPredicted RBP14.83□□□□□ -0.03
SLC28A1-202ENST00000338602 DLG5Q8TDM6 1919 aa14.83□□□□□ -0.04
SLC28A1-202ENST00000338602 ZPR1O75312 459 aa14.83□□□□□ -0.04
SLC28A1-202ENST00000338602 MIS18AQ9NYP9 233 aa14.83□□□□□ -0.04
SLC28A1-202ENST00000338602 TSPYL4Q9UJ04 414 aa14.83□□□□□ -0.04
SLC28A1-202ENST00000338602 UBR2Q8IWV8 1755 aa14.83□□□□□ -0.04
SLC28A1-202ENST00000338602 TJP1Q07157 1748 aa14.82□□□□□ -0.04
SLC28A1-202ENST00000338602 A0A087WZG4 1122 aa14.82□□□□□ -0.04
SLC28A1-202ENST00000338602 CANXP27824 592 aaKnown RBP14.82□□□□□ -0.04
SLC28A1-202ENST00000338602 CALD1Q05682 793 aaKnown RBP14.82□□□□□ -0.04
SLC28A1-202ENST00000338602 CCDC184Q52MB2 194 aa14.82□□□□□ -0.04
SLC28A1-202ENST00000338602 KLHL34Q8N239 644 aa14.82□□□□□ -0.04
SLC28A1-202ENST00000338602 SOS1Q07889 1333 aaPredicted RBP14.81□□□□□ -0.04
SLC28A1-202ENST00000338602 APAF1O14727 1248 aa14.81□□□□□ -0.04
SLC28A1-202ENST00000338602 FHDC1Q9C0D6 1143 aaPredicted RBP14.81□□□□□ -0.04
SLC28A1-202ENST00000338602 ZBTB1Q9Y2K1 713 aa14.81□□□□□ -0.04
SLC28A1-202ENST00000338602 CHD4Q14839 1912 aa14.8□□□□□ -0.04
SLC28A1-202ENST00000338602 SYT17Q9BSW7 474 aa14.8□□□□□ -0.04
SLC28A1-202ENST00000338602 MYH14Q7Z406 1995 aaKnown RBP14.8□□□□□ -0.04
SLC28A1-202ENST00000338602 IL6STP40189 918 aaPredicted RBP14.79□□□□□ -0.04
SLC28A1-202ENST00000338602 TRIM35Q9UPQ4 493 aa14.79□□□□□ -0.04
SLC28A1-202ENST00000338602 ZNF330Q9Y3S2 320 aaPredicted RBP14.79□□□□□ -0.04
SLC28A1-202ENST00000338602 LAS1LQ9Y4W2 734 aaKnown RBP14.79□□□□□ -0.04
SLC28A1-202ENST00000338602 USP16Q9Y5T5 823 aa14.79□□□□□ -0.04
SLC28A1-202ENST00000338602 USP42Q9H9J4 1324 aaKnown RBP14.79□□□□□ -0.04
SLC28A1-202ENST00000338602 GYS1P13807 737 aa14.78□□□□□ -0.04
SLC28A1-202ENST00000338602 EIF4A1P60842 406 aaKnown RBP14.78□□□□□ -0.04
SLC28A1-202ENST00000338602 NARFQ9UHQ1 456 aa14.78□□□□□ -0.04
SLC28A1-202ENST00000338602 PARP3Q9Y6F1 533 aa14.78□□□□□ -0.04
SLC28A1-202ENST00000338602 COL15A1P39059 1388 aa14.78□□□□□ -0.04
SLC28A1-202ENST00000338602 A1BGP04217 495 aa14.77□□□□□ -0.04
SLC28A1-202ENST00000338602 MMP10P09238 476 aa14.77□□□□□ -0.04
SLC28A1-202ENST00000338602 EIF5P55010 431 aaKnown RBP14.77□□□□□ -0.04
SLC28A1-202ENST00000338602 SRP68Q9UHB9 627 aaKnown RBP14.77□□□□□ -0.04
SLC28A1-202ENST00000338602 CD2APQ9Y5K6 639 aa14.77□□□□□ -0.04
SLC28A1-202ENST00000338602 COL24A1Q17RW2 1714 aa14.77□□□□□ -0.05
SLC28A1-202ENST00000338602 USPL1Q5W0Q7 1092 aa14.76□□□□□ -0.05
SLC28A1-202ENST00000338602 CHL1O00533 1208 aa14.75□□□□□ -0.05
SLC28A1-202ENST00000338602 FAM9BQ8IZU0 186 aa14.75□□□□□ -0.05
SLC28A1-202ENST00000338602 CFAP44Q96MT7 982 aa14.75□□□□□ -0.05
SLC28A1-202ENST00000338602 PRAMEF22A3QJZ6 481 aa14.74□□□□□ -0.05
SLC28A1-202ENST00000338602 GNAI1P63096 354 aa14.74□□□□□ -0.05
SLC28A1-202ENST00000338602 FKBP8Q14318 412 aa14.74□□□□□ -0.05
SLC28A1-202ENST00000338602 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
SLC28A1-202ENST00000338602 KDM3BQ7LBC6 1761 aa14.74□□□□□ -0.05
SLC28A1-202ENST00000338602 CCDC27Q2M243 656 aa14.73□□□□□ -0.05
SLC28A1-202ENST00000338602 DZIP3Q86Y13 1208 aaKnown RBP14.73□□□□□ -0.05
SLC28A1-202ENST00000338602 IFT57Q9NWB7 429 aa14.73□□□□□ -0.05
SLC28A1-202ENST00000338602 TBC1D2BQ9UPU7 963 aa14.73□□□□□ -0.05
SLC28A1-202ENST00000338602 ZNF652Q9Y2D9 606 aa14.73□□□□□ -0.05
SLC28A1-202ENST00000338602 ERBB4Q15303 1308 aa14.72□□□□□ -0.05
SLC28A1-202ENST00000338602 C4AP0C0L4 1744 aa14.72□□□□□ -0.05
SLC28A1-202ENST00000338602 NGEFQ8N5V2 710 aa14.72□□□□□ -0.05
SLC28A1-202ENST00000338602 EIF2S2P20042 333 aaKnown RBP14.71□□□□□ -0.06
SLC28A1-202ENST00000338602 TM4SF1P30408 202 aa14.71□□□□□ -0.06
SLC28A1-202ENST00000338602 PIP4K2AP48426 406 aaPredicted RBP14.71□□□□□ -0.06
SLC28A1-202ENST00000338602 CHMP4AQ9BY43 222 aa14.71□□□□□ -0.06
SLC28A1-202ENST00000338602 NBPF26B4DH59 902 aa14.7□□□□□ -0.06
SLC28A1-202ENST00000338602 CCER2I3L3R5 266 aa14.7□□□□□ -0.06
SLC28A1-202ENST00000338602 HOXB7P09629 217 aa14.7□□□□□ -0.06
SLC28A1-202ENST00000338602 TGFB2P61812 414 aa14.7□□□□□ -0.06
SLC28A1-202ENST00000338602 GPR162Q16538 588 aa14.7□□□□□ -0.06
SLC28A1-202ENST00000338602 NBPF10Q6P3W6 841 aaKnown RBP14.7□□□□□ -0.06
SLC28A1-202ENST00000338602 CLEC4GQ6UXB4 293 aa14.7□□□□□ -0.06
SLC28A1-202ENST00000338602 PELP1Q8IZL8 1130 aaKnown RBP14.7□□□□□ -0.06
SLC28A1-202ENST00000338602 NBPF15Q8N660 670 aa14.7□□□□□ -0.06
SLC28A1-202ENST00000338602 RGL2O15211 777 aa14.69□□□□□ -0.06
SLC28A1-202ENST00000338602 CAMTA2O94983 1202 aa14.69□□□□□ -0.06
SLC28A1-202ENST00000338602 ZNF853P0CG23 659 aa14.69□□□□□ -0.06
SLC28A1-202ENST00000338602 MYL6BP14649 208 aa14.69□□□□□ -0.06
SLC28A1-202ENST00000338602 NFIXQ14938 502 aa14.69□□□□□ -0.06
SLC28A1-202ENST00000338602 DIEXFQ68CQ4 756 aaKnown RBP14.69□□□□□ -0.06
SLC28A1-202ENST00000338602 KIF6Q6ZMV9 814 aa14.69□□□□□ -0.06
SLC28A1-202ENST00000338602 WWC1Q8IX03 1113 aa14.69□□□□□ -0.06
SLC28A1-202ENST00000338602 NLGN2Q8NFZ4 835 aa14.69□□□□□ -0.06
SLC28A1-202ENST00000338602 SETDB2Q96T68 719 aa14.69□□□□□ -0.06
SLC28A1-202ENST00000338602 BCL2L12Q9HB09 334 aa14.69□□□□□ -0.06
SLC28A1-202ENST00000338602 MBIPQ9NS73 344 aa14.69□□□□□ -0.06
SLC28A1-202ENST00000338602 LAMB4A4D0S4 1761 aa14.68□□□□□ -0.06
SLC28A1-202ENST00000338602 POLRMTO00411 1230 aaKnown RBP14.68□□□□□ -0.06
SLC28A1-202ENST00000338602 NPHP1O15259 732 aa14.68□□□□□ -0.06
SLC28A1-202ENST00000338602 DDR1Q08345 913 aa14.68□□□□□ -0.06
SLC28A1-202ENST00000338602 BICDL1Q6ZP65 573 aa14.68□□□□□ -0.06
SLC28A1-202ENST00000338602 IL16Q14005 1332 aa14.68□□□□□ -0.06
SLC28A1-202ENST00000338602 SERPINB2P05120 415 aa14.67□□□□□ -0.06
SLC28A1-202ENST00000338602 WDR63Q8IWG1 891 aa14.67□□□□□ -0.06
SLC28A1-202ENST00000338602 SALL2Q9Y467 1007 aaPredicted RBP14.67□□□□□ -0.06
SLC28A1-202ENST00000338602 ERVV-1B6SEH8 477 aa14.66□□□□□ -0.06
SLC28A1-202ENST00000338602 GRIN3BO60391 1043 aa14.66□□□□□ -0.06
SLC28A1-202ENST00000338602 HDGFL1Q5TGJ6 251 aa14.66□□□□□ -0.06
SLC28A1-202ENST00000338602 DUSP27Q5VZP5 1158 aa14.66□□□□□ -0.06
SLC28A1-202ENST00000338602 TBC1D9BQ66K14 1250 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms