RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 CHMLP26374 656 aa24.18■■□□□ 1.46
CDCA4-201ENST00000336219 SRCIN1Q9C0H9 1055 aa24.18■■□□□ 1.46
CDCA4-201ENST00000336219 ANO2Q9NQ90 1003 aa24.17■■□□□ 1.46
CDCA4-201ENST00000336219 UPF3BQ9BZI7 483 aaKnown RBP24.17■■□□□ 1.46
CDCA4-201ENST00000336219 TRIM6-TRIM34B2RNG4 842 aa24.16■■□□□ 1.46
CDCA4-201ENST00000336219 MCCP23508 829 aa24.16■■□□□ 1.46
CDCA4-201ENST00000336219 MCM2P49736 904 aa24.16■■□□□ 1.46
CDCA4-201ENST00000336219 MPNDQ8N594 471 aa24.16■■□□□ 1.46
CDCA4-201ENST00000336219 LTV1Q96GA3 475 aaPredicted RBP24.16■■□□□ 1.46
CDCA4-201ENST00000336219 UQCRHLA0A096LP55 91 aa24.16■■□□□ 1.46
CDCA4-201ENST00000336219 UQCRHP07919 91 aa24.16■■□□□ 1.46
CDCA4-201ENST00000336219 TPRNQ4KMQ1 711 aa24.16■■□□□ 1.46
CDCA4-201ENST00000336219 THEMISQ8N1K5 641 aaPredicted RBP24.16■■□□□ 1.46
CDCA4-201ENST00000336219 ABTB2Q8N961 1025 aa24.16■■□□□ 1.46
CDCA4-201ENST00000336219 GADD45BO75293 160 aaPredicted RBP24.15■■□□□ 1.46
CDCA4-201ENST00000336219 UBTFL1P0CB47 393 aaPredicted RBP24.15■■□□□ 1.46
CDCA4-201ENST00000336219 ANAPC15P60006 121 aa24.15■■□□□ 1.46
CDCA4-201ENST00000336219 UNC5CLQ8IV45 518 aa24.15■■□□□ 1.46
CDCA4-201ENST00000336219 LTN1O94822 1766 aa24.15■■□□□ 1.46
CDCA4-201ENST00000336219 AOX1Q06278 1338 aa24.14■■□□□ 1.46
CDCA4-201ENST00000336219 HDGFL1Q5TGJ6 251 aa24.14■■□□□ 1.46
CDCA4-201ENST00000336219 CUL4AQ13619 759 aa24.14■■□□□ 1.45
CDCA4-201ENST00000336219 PLPPR3Q6T4P5 718 aa24.14■■□□□ 1.45
CDCA4-201ENST00000336219 IL25Q9H293 177 aa24.14■■□□□ 1.45
CDCA4-201ENST00000336219 MBD3O95983 291 aa24.13■■□□□ 1.45
CDCA4-201ENST00000336219 KCNA6P17658 529 aa24.13■■□□□ 1.45
CDCA4-201ENST00000336219 SSH3Q8TE77 659 aa24.13■■□□□ 1.45
CDCA4-201ENST00000336219 FER1L4A9Z1Z3 1794 aa24.13■■□□□ 1.45
CDCA4-201ENST00000336219 ARID3AQ99856 593 aa24.13■■□□□ 1.45
CDCA4-201ENST00000336219 PHAXQ9H814 394 aaKnown RBP24.13■■□□□ 1.45
CDCA4-201ENST00000336219 IL17RAQ96F46 866 aa24.12■■□□□ 1.45
CDCA4-201ENST00000336219 CCDC39Q9UFE4 941 aa24.12■■□□□ 1.45
CDCA4-201ENST00000336219 TERF1P54274 439 aa24.11■■□□□ 1.45
CDCA4-201ENST00000336219 USHBP1Q8N6Y0 703 aa24.11■■□□□ 1.45
CDCA4-201ENST00000336219 TSPY26PQ9H489 355 aa24.11■■□□□ 1.45
CDCA4-201ENST00000336219 CEMIPQ8WUJ3 1361 aa24.1■■□□□ 1.45
CDCA4-201ENST00000336219 IL1RAPL2Q9NP60 686 aa24.1■■□□□ 1.45
CDCA4-201ENST00000336219 MED1Q15648 1581 aaPredicted RBP24.09■■□□□ 1.45
CDCA4-201ENST00000336219 RAB11FIP3O75154 756 aa24.09■■□□□ 1.45
CDCA4-201ENST00000336219 MAP4K4O95819 1239 aaPredicted RBP24.08■■□□□ 1.45
CDCA4-201ENST00000336219 PTMAP06454 111 aaKnown RBP24.08■■□□□ 1.45
CDCA4-201ENST00000336219 POLA2Q14181 598 aa24.08■■□□□ 1.45
CDCA4-201ENST00000336219 PPP1R42Q7Z4L9 355 aa24.08■■□□□ 1.45
CDCA4-201ENST00000336219 INTS4Q96HW7 963 aaKnown RBP24.08■■□□□ 1.45
CDCA4-201ENST00000336219 KDM3BQ7LBC6 1761 aa24.08■■□□□ 1.44
CDCA4-201ENST00000336219 USP48Q86UV5 1035 aa24.08■■□□□ 1.44
CDCA4-201ENST00000336219 EPB41L2O43491 1005 aaKnown RBP24.07■■□□□ 1.44
CDCA4-201ENST00000336219 NUTM1Q86Y26 1132 aa24.07■■□□□ 1.44
CDCA4-201ENST00000336219 LARP6Q9BRS8 491 aaKnown RBP24.07■■□□□ 1.44
CDCA4-201ENST00000336219 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.07■■□□□ 1.44
CDCA4-201ENST00000336219 SURF6O75683 361 aaKnown RBP24.06■■□□□ 1.44
CDCA4-201ENST00000336219 ZNF830Q96NB3 372 aaPredicted RBP24.06■■□□□ 1.44
CDCA4-201ENST00000336219 DTNBO60941 627 aa24.06■■□□□ 1.44
CDCA4-201ENST00000336219 C14orf37Q86TY3 774 aa24.06■■□□□ 1.44
CDCA4-201ENST00000336219 SETD1BQ9UPS6 1966 aaKnown RBP24.05■■□□□ 1.44
CDCA4-201ENST00000336219 EIF4A1P60842 406 aaKnown RBP24.05■■□□□ 1.44
CDCA4-201ENST00000336219 EIF2S2P20042 333 aaKnown RBP24.05■■□□□ 1.44
CDCA4-201ENST00000336219 RHPN1Q8TCX5 695 aa24.05■■□□□ 1.44
CDCA4-201ENST00000336219 IP6K1Q92551 441 aa24.05■■□□□ 1.44
CDCA4-201ENST00000336219 PI4K2BQ8TCG2 481 aa24.04■■□□□ 1.44
CDCA4-201ENST00000336219 JARID2Q92833 1246 aaPredicted RBP24.04■■□□□ 1.44
CDCA4-201ENST00000336219 MCM5P33992 734 aa24.04■■□□□ 1.44
CDCA4-201ENST00000336219 HSPA4P34932 840 aa24.04■■□□□ 1.44
CDCA4-201ENST00000336219 NFAT5O94916 1531 aa24.03■■□□□ 1.44
CDCA4-201ENST00000336219 HOXB7P09629 217 aa24.03■■□□□ 1.44
CDCA4-201ENST00000336219 CSPP1Q1MSJ5 1256 aa24.03■■□□□ 1.44
CDCA4-201ENST00000336219 LGR6Q9HBX8 967 aa24.03■■□□□ 1.44
CDCA4-201ENST00000336219 SRGAP3O43295 1099 aa24.03■■□□□ 1.44
CDCA4-201ENST00000336219 NBPF7P0C2Y1 421 aaPredicted RBP24.03■■□□□ 1.44
CDCA4-201ENST00000336219 NBPF6Q5VWK0 638 aa24.03■■□□□ 1.44
CDCA4-201ENST00000336219 NBPF4Q96M43 638 aa24.03■■□□□ 1.44
CDCA4-201ENST00000336219 CHPF2Q9P2E5 772 aa24.03■■□□□ 1.44
CDCA4-201ENST00000336219 PHF8Q9UPP1 1060 aa24.03■■□□□ 1.44
CDCA4-201ENST00000336219 KIF1BPQ96EK5 621 aa24.02■■□□□ 1.44
CDCA4-201ENST00000336219 BEND3Q5T5X7 828 aa24.02■■□□□ 1.44
CDCA4-201ENST00000336219 RGPD2P0DJD1 1756 aa24.02■■□□□ 1.43
CDCA4-201ENST00000336219 LMO7Q8WWI1 1683 aa24.01■■□□□ 1.43
CDCA4-201ENST00000336219 DNAAF4Q8WXU2 420 aa24.01■■□□□ 1.43
CDCA4-201ENST00000336219 TCHHQ07283 1943 aa24.01■■□□□ 1.43
CDCA4-201ENST00000336219 USP25Q9UHP3 1055 aa24.01■■□□□ 1.43
CDCA4-201ENST00000336219 CNPY2Q9Y2B0 182 aa24.01■■□□□ 1.43
CDCA4-201ENST00000336219 RPAP1Q9BWH6 1393 aaPredicted RBP24■■□□□ 1.43
CDCA4-201ENST00000336219 PI4KAP2A4QPH2 592 aa24■■□□□ 1.43
CDCA4-201ENST00000336219 SASS6Q6UVJ0 657 aa24■■□□□ 1.43
CDCA4-201ENST00000336219 PI4KAP1Q8N8J0 262 aa24■■□□□ 1.43
CDCA4-201ENST00000336219 SYAP1Q96A49 352 aaPredicted RBP24■■□□□ 1.43
CDCA4-201ENST00000336219 C17orf53Q8N3J3 647 aaPredicted RBP24■■□□□ 1.43
CDCA4-201ENST00000336219 CRYBG1Q9Y4K1 1723 aa23.99■■□□□ 1.43
CDCA4-201ENST00000336219 SGSM2O43147 1006 aa23.99■■□□□ 1.43
CDCA4-201ENST00000336219 CHMP4AQ9BY43 222 aa23.99■■□□□ 1.43
CDCA4-201ENST00000336219 RAD50Q92878 1312 aa23.99■■□□□ 1.43
CDCA4-201ENST00000336219 KCNQ3O43525 872 aa23.98■■□□□ 1.43
CDCA4-201ENST00000336219 KIAA2012Q0VF49 1180 aa23.98■■□□□ 1.43
CDCA4-201ENST00000336219 CHD2O14647 1828 aaKnown RBP23.98■■□□□ 1.43
CDCA4-201ENST00000336219 WDR33Q9C0J8 1336 aaKnown RBP23.97■■□□□ 1.43
CDCA4-201ENST00000336219 TSC1Q92574 1164 aa23.97■■□□□ 1.43
CDCA4-201ENST00000336219 PHRF1Q9P1Y6 1649 aaKnown RBP23.97■■□□□ 1.43
CDCA4-201ENST00000336219 CNTROBQ8N137 903 aa23.97■■□□□ 1.43
CDCA4-201ENST00000336219 ADCY9O60503 1353 aa23.96■■□□□ 1.43
CDCA4-201ENST00000336219 DYNC1I1O14576 645 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms