RNA–Protein interactions for RNA: ENST00000333651.10

HMG20B-202, Transcript of high mobility group 20B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20B, Length 1,596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-202ENST00000333651 USP16Q9Y5T5 823 aa30.84■■■□□ 2.53
HMG20B-202ENST00000333651 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.83■■■□□ 2.53
HMG20B-202ENST00000333651 PRAMEF22A3QJZ6 481 aa30.83■■■□□ 2.53
HMG20B-202ENST00000333651 GIGYF1O75420 1035 aaPredicted RBP30.83■■■□□ 2.53
HMG20B-202ENST00000333651 WDR63Q8IWG1 891 aa30.83■■■□□ 2.53
HMG20B-202ENST00000333651 MBIPQ9NS73 344 aa30.83■■■□□ 2.53
HMG20B-202ENST00000333651 COL23A1Q86Y22 540 aaPredicted RBP30.83■■■□□ 2.53
HMG20B-202ENST00000333651 SMIM5Q71RC9 77 aa30.82■■■□□ 2.52
HMG20B-202ENST00000333651 AMIGO3Q86WK7 504 aa30.82■■■□□ 2.52
HMG20B-202ENST00000333651 TRAPPC3LQ5T215 181 aa30.81■■■□□ 2.52
HMG20B-202ENST00000333651 IL16Q14005 1332 aa30.81■■■□□ 2.52
HMG20B-202ENST00000333651 MYH14Q7Z406 1995 aaKnown RBP30.79■■■□□ 2.52
HMG20B-202ENST00000333651 ADRA2BP18089 450 aa30.79■■■□□ 2.52
HMG20B-202ENST00000333651 CANXP27824 592 aaKnown RBP30.79■■■□□ 2.52
HMG20B-202ENST00000333651 SLC16A10Q8TF71 515 aa30.79■■■□□ 2.52
HMG20B-202ENST00000333651 ZBTB1Q9Y2K1 713 aa30.79■■■□□ 2.52
HMG20B-202ENST00000333651 A1BGP04217 495 aa30.78■■■□□ 2.52
HMG20B-202ENST00000333651 QSER1Q2KHR3 1735 aa30.77■■■□□ 2.52
HMG20B-202ENST00000333651 ZBTB7AO95365 584 aa30.77■■■□□ 2.52
HMG20B-202ENST00000333651 TUBGCP6Q96RT7 1819 aa30.77■■■□□ 2.52
HMG20B-202ENST00000333651 UBR3Q6ZT12 1888 aa30.77■■■□□ 2.52
HMG20B-202ENST00000333651 ARHGEF1Q92888 912 aaKnown RBP30.76■■■□□ 2.52
HMG20B-202ENST00000333651 MTFR1LQ9H019 292 aa30.75■■■□□ 2.51
HMG20B-202ENST00000333651 RFC4P35249 363 aa30.74■■■□□ 2.51
HMG20B-202ENST00000333651 KRT24Q2M2I5 525 aa30.74■■■□□ 2.51
HMG20B-202ENST00000333651 CASZ1Q86V15 1759 aa30.73■■■□□ 2.51
HMG20B-202ENST00000333651 SOS1Q07889 1333 aaPredicted RBP30.73■■■□□ 2.51
HMG20B-202ENST00000333651 NPM2Q86SE8 214 aaKnown RBP30.73■■■□□ 2.51
HMG20B-202ENST00000333651 TSR2Q969E8 191 aaKnown RBP30.73■■■□□ 2.51
HMG20B-202ENST00000333651 ZNF521Q96K83 1311 aa30.72■■■□□ 2.51
HMG20B-202ENST00000333651 SPON1Q9HCB6 807 aa30.72■■■□□ 2.51
HMG20B-202ENST00000333651 EIF2S2P20042 333 aaKnown RBP30.71■■■□□ 2.51
HMG20B-202ENST00000333651 IL6STP40189 918 aaPredicted RBP30.71■■■□□ 2.51
HMG20B-202ENST00000333651 ATF5Q9Y2D1 282 aaPredicted RBP30.71■■■□□ 2.51
HMG20B-202ENST00000333651 EIF5P55010 431 aaKnown RBP30.71■■■□□ 2.51
HMG20B-202ENST00000333651 ZNF330Q9Y3S2 320 aaPredicted RBP30.71■■■□□ 2.51
HMG20B-202ENST00000333651 PIP4K2AP48426 406 aaPredicted RBP30.7■■■□□ 2.5
HMG20B-202ENST00000333651 DUSP27Q5VZP5 1158 aa30.7■■■□□ 2.5
HMG20B-202ENST00000333651 HOXB7P09629 217 aa30.69■■■□□ 2.5
HMG20B-202ENST00000333651 MYH16Q9H6N6 1097 aa30.69■■■□□ 2.5
HMG20B-202ENST00000333651 A0A087WZG4 1122 aa30.68■■■□□ 2.5
HMG20B-202ENST00000333651 COL15A1P39059 1388 aa30.68■■■□□ 2.5
HMG20B-202ENST00000333651 NBPF26B4DH59 902 aa30.67■■■□□ 2.5
HMG20B-202ENST00000333651 GOLGA2Q08379 1002 aa30.67■■■□□ 2.5
HMG20B-202ENST00000333651 NBPF10Q6P3W6 841 aaKnown RBP30.67■■■□□ 2.5
HMG20B-202ENST00000333651 NBPF15Q8N660 670 aa30.67■■■□□ 2.5
HMG20B-202ENST00000333651 SPINK5Q9NQ38 1064 aaPredicted RBP30.67■■■□□ 2.5
HMG20B-202ENST00000333651 ELL2O00472 640 aaPredicted RBP30.66■■■□□ 2.5
HMG20B-202ENST00000333651 ZPR1O75312 459 aa30.66■■■□□ 2.5
HMG20B-202ENST00000333651 C8orf58Q8NAV2 365 aa30.66■■■□□ 2.5
HMG20B-202ENST00000333651 ARXQ96QS3 562 aa30.66■■■□□ 2.5
HMG20B-202ENST00000333651 FANCIQ9NVI1 1328 aa30.65■■■□□ 2.5
HMG20B-202ENST00000333651 MSL1Q68DK7 614 aa30.65■■■□□ 2.5
HMG20B-202ENST00000333651 NECTIN2Q92692 538 aa30.65■■■□□ 2.5
HMG20B-202ENST00000333651 ERBB4Q15303 1308 aa30.64■■■□□ 2.5
HMG20B-202ENST00000333651 HNRNPUQ00839 825 aaKnown RBP eCLIP30.64■■■□□ 2.5
HMG20B-202ENST00000333651 LAMB4A4D0S4 1761 aa30.64■■■□□ 2.5
HMG20B-202ENST00000333651 HDGFL1Q5TGJ6 251 aa30.63■■■□□ 2.49
HMG20B-202ENST00000333651 SRP68Q9UHB9 627 aaKnown RBP30.63■■■□□ 2.49
HMG20B-202ENST00000333651 NARFQ9UHQ1 456 aa30.63■■■□□ 2.49
HMG20B-202ENST00000333651 USP42Q9H9J4 1324 aaKnown RBP30.63■■■□□ 2.49
HMG20B-202ENST00000333651 MYL6BP14649 208 aa30.62■■■□□ 2.49
HMG20B-202ENST00000333651 NLGN1Q8N2Q7 840 aa30.62■■■□□ 2.49
HMG20B-202ENST00000333651 GYS1P13807 737 aa30.62■■■□□ 2.49
HMG20B-202ENST00000333651 CHMP4AQ9BY43 222 aa30.62■■■□□ 2.49
HMG20B-202ENST00000333651 TBC1D2BQ9UPU7 963 aa30.62■■■□□ 2.49
HMG20B-202ENST00000333651 E9PSI1 815 aa30.61■■■□□ 2.49
HMG20B-202ENST00000333651 POLD1P28340 1107 aa30.61■■■□□ 2.49
HMG20B-202ENST00000333651 PTGER2P43116 358 aa30.61■■■□□ 2.49
HMG20B-202ENST00000333651 USPL1Q5W0Q7 1092 aa30.61■■■□□ 2.49
HMG20B-202ENST00000333651 TSPYL6Q8N831 410 aa30.61■■■□□ 2.49
HMG20B-202ENST00000333651 PDIA6Q15084 440 aa30.59■■■□□ 2.49
HMG20B-202ENST00000333651 DZIP3Q86Y13 1208 aaKnown RBP30.59■■■□□ 2.49
HMG20B-202ENST00000333651 TWISTNBQ3B726 338 aaPredicted RBP30.58■■■□□ 2.49
HMG20B-202ENST00000333651 SGIP1Q9BQI5 828 aa30.58■■■□□ 2.49
HMG20B-202ENST00000333651 C4AP0C0L4 1744 aa30.57■■■□□ 2.48
HMG20B-202ENST00000333651 EXOSC9Q06265 439 aaKnown RBP30.57■■■□□ 2.48
HMG20B-202ENST00000333651 SLFN5Q08AF3 891 aa30.57■■■□□ 2.48
HMG20B-202ENST00000333651 DDX21Q9NR30 783 aaKnown RBP eCLIP30.57■■■□□ 2.48
HMG20B-202ENST00000333651 DBF4Q9UBU7 674 aaPredicted RBP30.57■■■□□ 2.48
HMG20B-202ENST00000333651 CHPF2Q9P2E5 772 aa30.56■■■□□ 2.48
HMG20B-202ENST00000333651 PPP1R1BQ9UD71 204 aaPredicted RBP30.56■■■□□ 2.48
HMG20B-202ENST00000333651 FKBP8Q14318 412 aa30.55■■■□□ 2.48
HMG20B-202ENST00000333651 CDCA7LQ96GN5 454 aa30.55■■■□□ 2.48
HMG20B-202ENST00000333651 ANXA1P04083 346 aa30.54■■■□□ 2.48
HMG20B-202ENST00000333651 PROSER3Q2NL68 480 aa30.54■■■□□ 2.48
HMG20B-202ENST00000333651 CCDC30Q5VVM6 783 aa30.54■■■□□ 2.48
HMG20B-202ENST00000333651 CAMTA2O94983 1202 aa30.53■■■□□ 2.48
HMG20B-202ENST00000333651 LRP5O75197 1615 aa30.53■■■□□ 2.48
HMG20B-202ENST00000333651 SRCAPQ6ZRS2 3230 aa30.53■■■□□ 2.48
HMG20B-202ENST00000333651 LRP10Q7Z4F1 713 aa30.52■■■□□ 2.48
HMG20B-202ENST00000333651 BCL2L12Q9HB09 334 aa30.52■■■□□ 2.48
HMG20B-202ENST00000333651 MMP10P09238 476 aa30.51■■■□□ 2.47
HMG20B-202ENST00000333651 KIF6Q6ZMV9 814 aa30.51■■■□□ 2.47
HMG20B-202ENST00000333651 HYPKQ9NX55 129 aa30.51■■■□□ 2.47
HMG20B-202ENST00000333651 VAMP4O75379 141 aa30.5■■■□□ 2.47
HMG20B-202ENST00000333651 TTLL7Q6ZT98 887 aa30.49■■■□□ 2.47
HMG20B-202ENST00000333651 AIMP1Q12904 312 aaKnown RBP30.49■■■□□ 2.47
HMG20B-202ENST00000333651 CLEC4GQ6UXB4 293 aa30.49■■■□□ 2.47
HMG20B-202ENST00000333651 COPS6Q7L5N1 327 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms