RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 SLC27A3Q5K4L6 730 aa12.11□□□□□ -0.47
C11orf54-201ENST00000331239 HYPKQ9NX55 129 aa12.11□□□□□ -0.47
C11orf54-201ENST00000331239 DBF4Q9UBU7 674 aaPredicted RBP12.11□□□□□ -0.47
C11orf54-201ENST00000331239 PLSCR1O15162 318 aa12.11□□□□□ -0.47
C11orf54-201ENST00000331239 AAMPQ13685 434 aa12.11□□□□□ -0.47
C11orf54-201ENST00000331239 PDE3AQ14432 1141 aa12.1□□□□□ -0.47
C11orf54-201ENST00000331239 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
C11orf54-201ENST00000331239 PALLDQ8WX93 1383 aa12.1□□□□□ -0.47
C11orf54-201ENST00000331239 RC3H1Q5TC82 1133 aaKnown RBP12.1□□□□□ -0.47
C11orf54-201ENST00000331239 HDGFL1Q5TGJ6 251 aa12.1□□□□□ -0.47
C11orf54-201ENST00000331239 MRPL50Q8N5N7 158 aaKnown RBP12.1□□□□□ -0.47
C11orf54-201ENST00000331239 DDX21Q9NR30 783 aaKnown RBP eCLIP12.1□□□□□ -0.47
C11orf54-201ENST00000331239 ASAP1Q9ULH1 1129 aa12.1□□□□□ -0.47
C11orf54-201ENST00000331239 TJP1Q07157 1748 aa12.1□□□□□ -0.47
C11orf54-201ENST00000331239 KCNQ3O43525 872 aa12.09□□□□□ -0.47
C11orf54-201ENST00000331239 SLC39A6Q13433 755 aa12.09□□□□□ -0.47
C11orf54-201ENST00000331239 SSH1Q8WYL5 1049 aa12.09□□□□□ -0.47
C11orf54-201ENST00000331239 COL5A3P25940 1745 aaPredicted RBP12.09□□□□□ -0.47
C11orf54-201ENST00000331239 SYTL4Q96C24 671 aaPredicted RBP12.09□□□□□ -0.47
C11orf54-201ENST00000331239 API5Q9BZZ5 524 aaKnown RBP12.09□□□□□ -0.47
C11orf54-201ENST00000331239 SMC4Q9NTJ3 1288 aa12.09□□□□□ -0.47
C11orf54-201ENST00000331239 LOC102724428A0A0B4J2F2 783 aa12.08□□□□□ -0.48
C11orf54-201ENST00000331239 SIK1P57059 783 aa12.08□□□□□ -0.48
C11orf54-201ENST00000331239 CHMP4BQ9H444 224 aaKnown RBP12.08□□□□□ -0.48
C11orf54-201ENST00000331239 ZKSCAN2Q63HK3 967 aa12.08□□□□□ -0.48
C11orf54-201ENST00000331239 ACSBG1Q96GR2 724 aa12.08□□□□□ -0.48
C11orf54-201ENST00000331239 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.48
C11orf54-201ENST00000331239 CNTNAP4Q9C0A0 1308 aa12.07□□□□□ -0.48
C11orf54-201ENST00000331239 PXDNLA1KZ92 1463 aa12.07□□□□□ -0.48
C11orf54-201ENST00000331239 KCNQ2O43526 872 aa12.07□□□□□ -0.48
C11orf54-201ENST00000331239 EIF5BO60841 1220 aaKnown RBP12.07□□□□□ -0.48
C11orf54-201ENST00000331239 N4BP2Q86UW6 1770 aaPredicted RBP12.07□□□□□ -0.48
C11orf54-201ENST00000331239 TAF1LQ8IZX4 1826 aa12.06□□□□□ -0.48
C11orf54-201ENST00000331239 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
C11orf54-201ENST00000331239 CYP19A1P11511 503 aaPredicted RBP12.06□□□□□ -0.48
C11orf54-201ENST00000331239 DDX58O95786 925 aaKnown RBP12.05□□□□□ -0.48
C11orf54-201ENST00000331239 ATF7IPQ6VMQ6 1270 aa12.05□□□□□ -0.48
C11orf54-201ENST00000331239 A0A087WZG4 1122 aa12.05□□□□□ -0.48
C11orf54-201ENST00000331239 IL6STP40189 918 aaPredicted RBP12.05□□□□□ -0.48
C11orf54-201ENST00000331239 EXOC6Q8TAG9 804 aa12.05□□□□□ -0.48
C11orf54-201ENST00000331239 RBM42Q9BTD8 480 aaKnown RBP12.05□□□□□ -0.48
C11orf54-201ENST00000331239 ELL2O00472 640 aaPredicted RBP12.04□□□□□ -0.48
C11orf54-201ENST00000331239 PTCD1O75127 700 aaKnown RBP12.04□□□□□ -0.48
C11orf54-201ENST00000331239 ATP6V1AP38606 617 aa12.04□□□□□ -0.48
C11orf54-201ENST00000331239 PDIA6Q15084 440 aa12.04□□□□□ -0.48
C11orf54-201ENST00000331239 KRT24Q2M2I5 525 aa12.04□□□□□ -0.48
C11orf54-201ENST00000331239 USP16Q9Y5T5 823 aa12.04□□□□□ -0.48
C11orf54-201ENST00000331239 BCAR3O75815 825 aa12.03□□□□□ -0.48
C11orf54-201ENST00000331239 SLC4A9Q96Q91 983 aa12.03□□□□□ -0.48
C11orf54-201ENST00000331239 TRIM37O94972 964 aa12.03□□□□□ -0.48
C11orf54-201ENST00000331239 EIF2S2P20042 333 aaKnown RBP12.03□□□□□ -0.48
C11orf54-201ENST00000331239 FLIIQ13045 1269 aa12.03□□□□□ -0.48
C11orf54-201ENST00000331239 LRP10Q7Z4F1 713 aa12.03□□□□□ -0.48
C11orf54-201ENST00000331239 DNAJC10Q8IXB1 793 aa12.03□□□□□ -0.48
C11orf54-201ENST00000331239 CCDC87Q9NVE4 849 aa12.03□□□□□ -0.48
C11orf54-201ENST00000331239 CHPF2Q9P2E5 772 aa12.03□□□□□ -0.48
C11orf54-201ENST00000331239 NOB1Q9ULX3 412 aaKnown RBP12.03□□□□□ -0.48
C11orf54-201ENST00000331239 ATP10DQ9P241 1426 aa12.03□□□□□ -0.48
C11orf54-201ENST00000331239 CCNL1Q9UK58 526 aaPredicted RBP12.02□□□□□ -0.48
C11orf54-201ENST00000331239 ABCC4O15439 1325 aa12.02□□□□□ -0.49
C11orf54-201ENST00000331239 ERVV-1B6SEH8 477 aa12.02□□□□□ -0.49
C11orf54-201ENST00000331239 CANXP27824 592 aaKnown RBP12.02□□□□□ -0.49
C11orf54-201ENST00000331239 CCT4P50991 539 aaKnown RBP12.02□□□□□ -0.49
C11orf54-201ENST00000331239 DZIP1LQ8IYY4 767 aaKnown RBP12.02□□□□□ -0.49
C11orf54-201ENST00000331239 SF3B2Q13435 895 aaKnown RBP12.01□□□□□ -0.49
C11orf54-201ENST00000331239 INTS3Q68E01 1043 aaKnown RBP12.01□□□□□ -0.49
C11orf54-201ENST00000331239 KSR2Q6VAB6 950 aa12.01□□□□□ -0.49
C11orf54-201ENST00000331239 HDAC5Q9UQL6 1122 aa12.01□□□□□ -0.49
C11orf54-201ENST00000331239 QSER1Q2KHR3 1735 aa12.01□□□□□ -0.49
C11orf54-201ENST00000331239 C4BP0C0L5 1744 aa12.01□□□□□ -0.49
C11orf54-201ENST00000331239 RPS6KA4O75676 772 aa12□□□□□ -0.49
C11orf54-201ENST00000331239 EIF5P55010 431 aaKnown RBP12□□□□□ -0.49
C11orf54-201ENST00000331239 INTS5Q6P9B9 1019 aaKnown RBP12□□□□□ -0.49
C11orf54-201ENST00000331239 NPM2Q86SE8 214 aaKnown RBP12□□□□□ -0.49
C11orf54-201ENST00000331239 FLAD1Q8NFF5 587 aa12□□□□□ -0.49
C11orf54-201ENST00000331239 PLBD2Q8NHP8 589 aa12□□□□□ -0.49
C11orf54-201ENST00000331239 NBPF26B4DH59 902 aa12□□□□□ -0.49
C11orf54-201ENST00000331239 APBA3O96018 575 aa12□□□□□ -0.49
C11orf54-201ENST00000331239 TRIM27P14373 513 aa12□□□□□ -0.49
C11orf54-201ENST00000331239 CRKLP46109 303 aaKnown RBP12□□□□□ -0.49
C11orf54-201ENST00000331239 ITPK1Q13572 414 aa12□□□□□ -0.49
C11orf54-201ENST00000331239 HSP90AB3PQ58FF7 597 aa12□□□□□ -0.49
C11orf54-201ENST00000331239 FAM182BQ5T319 152 aa12□□□□□ -0.49
C11orf54-201ENST00000331239 NBPF14Q5TI25 921 aa12□□□□□ -0.49
C11orf54-201ENST00000331239 NBPF10Q6P3W6 841 aaKnown RBP12□□□□□ -0.49
C11orf54-201ENST00000331239 NBPF15Q8N660 670 aa12□□□□□ -0.49
C11orf54-201ENST00000331239 MYH14Q7Z406 1995 aaKnown RBP11.99□□□□□ -0.49
C11orf54-201ENST00000331239 ALDH1L1O75891 902 aa11.99□□□□□ -0.49
C11orf54-201ENST00000331239 BAG6P46379 1132 aa11.99□□□□□ -0.49
C11orf54-201ENST00000331239 FTSJ3Q8IY81 847 aaKnown RBP11.99□□□□□ -0.49
C11orf54-201ENST00000331239 DDX19BQ9UMR2 479 aa11.99□□□□□ -0.49
C11orf54-201ENST00000331239 NUP188Q5SRE5 1749 aa11.99□□□□□ -0.49
C11orf54-201ENST00000331239 PRAMEF22A3QJZ6 481 aa11.99□□□□□ -0.49
C11orf54-201ENST00000331239 ANP32AP39687 249 aaKnown RBP11.99□□□□□ -0.49
C11orf54-201ENST00000331239 TRIM28Q13263 835 aaKnown RBP11.99□□□□□ -0.49
C11orf54-201ENST00000331239 TXNRD1Q16881 649 aa11.99□□□□□ -0.49
C11orf54-201ENST00000331239 CLEC4GQ6UXB4 293 aa11.99□□□□□ -0.49
C11orf54-201ENST00000331239 ANKRD13DQ6ZTN6 518 aa11.99□□□□□ -0.49
C11orf54-201ENST00000331239 FKBP5Q13451 457 aaPredicted RBP11.98□□□□□ -0.49
C11orf54-201ENST00000331239 TCERG1O14776 1098 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms