RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 XPCQ01831 940 aaPredicted RBP21.1■□□□□ 0.97
PTP4A3-201ENST00000329397 TTC21AQ8NDW8 1320 aa21.1■□□□□ 0.97
PTP4A3-201ENST00000329397 NBPF7P0C2Y1 421 aaPredicted RBP21.09■□□□□ 0.97
PTP4A3-201ENST00000329397 HSP90AA2PQ14568 343 aaPredicted RBP21.09■□□□□ 0.97
PTP4A3-201ENST00000329397 PIK3C2AO00443 1686 aa21.09■□□□□ 0.97
PTP4A3-201ENST00000329397 PLEKHG1Q9ULL1 1385 aa21.08■□□□□ 0.97
PTP4A3-201ENST00000329397 CPA1P15085 419 aa21.08■□□□□ 0.97
PTP4A3-201ENST00000329397 LRSAM1Q6UWE0 723 aa21.08■□□□□ 0.97
PTP4A3-201ENST00000329397 ABTB2Q8N961 1025 aa21.08■□□□□ 0.97
PTP4A3-201ENST00000329397 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.08■□□□□ 0.97
PTP4A3-201ENST00000329397 KCNQ3O43525 872 aa21.08■□□□□ 0.96
PTP4A3-201ENST00000329397 CUL4AQ13619 759 aa21.08■□□□□ 0.96
PTP4A3-201ENST00000329397 SOS1Q07889 1333 aaPredicted RBP21.07■□□□□ 0.96
PTP4A3-201ENST00000329397 SRGAP3O43295 1099 aa21.07■□□□□ 0.96
PTP4A3-201ENST00000329397 TAF7Q15545 349 aaPredicted RBP21.07■□□□□ 0.96
PTP4A3-201ENST00000329397 MAP3K5Q99683 1374 aa21.07■□□□□ 0.96
PTP4A3-201ENST00000329397 STAP2Q9UGK3 403 aa21.06■□□□□ 0.96
PTP4A3-201ENST00000329397 EID1Q9Y6B2 187 aa21.06■□□□□ 0.96
PTP4A3-201ENST00000329397 LGR6Q9HBX8 967 aa21.06■□□□□ 0.96
PTP4A3-201ENST00000329397 SPG7Q9UQ90 795 aa21.06■□□□□ 0.96
PTP4A3-201ENST00000329397 DDX54Q8TDD1 881 aaKnown RBP21.05■□□□□ 0.96
PTP4A3-201ENST00000329397 PDLIM2Q96JY6 352 aa21.05■□□□□ 0.96
PTP4A3-201ENST00000329397 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
PTP4A3-201ENST00000329397 CWC27Q6UX04 472 aaKnown RBP21.04■□□□□ 0.96
PTP4A3-201ENST00000329397 RASEFQ8IZ41 740 aa21.04■□□□□ 0.96
PTP4A3-201ENST00000329397 RHPN1Q8TCX5 695 aa21.04■□□□□ 0.96
PTP4A3-201ENST00000329397 R3HCC1Q9Y3T6 440 aaKnown RBP21.04■□□□□ 0.96
PTP4A3-201ENST00000329397 MCM2P49736 904 aa21.03■□□□□ 0.96
PTP4A3-201ENST00000329397 PI4K2BQ8TCG2 481 aa21.03■□□□□ 0.96
PTP4A3-201ENST00000329397 SSH3Q8TE77 659 aa21.03■□□□□ 0.96
PTP4A3-201ENST00000329397 DIP2AQ14689 1571 aa21.03■□□□□ 0.96
PTP4A3-201ENST00000329397 PI4KAP2A4QPH2 592 aa21.03■□□□□ 0.96
PTP4A3-201ENST00000329397 PI4KAP1Q8N8J0 262 aa21.03■□□□□ 0.96
PTP4A3-201ENST00000329397 SRCIN1Q9C0H9 1055 aa21.03■□□□□ 0.96
PTP4A3-201ENST00000329397 ANAPC15P60006 121 aa21.02■□□□□ 0.96
PTP4A3-201ENST00000329397 PAXIP1Q6ZW49 1069 aaPredicted RBP21.02■□□□□ 0.96
PTP4A3-201ENST00000329397 USP48Q86UV5 1035 aa21.02■□□□□ 0.96
PTP4A3-201ENST00000329397 HSPA4P34932 840 aa21.02■□□□□ 0.95
PTP4A3-201ENST00000329397 NWD1Q149M9 1564 aa21.01■□□□□ 0.95
PTP4A3-201ENST00000329397 OFD1O75665 1012 aa21.01■□□□□ 0.95
PTP4A3-201ENST00000329397 KCNA6P17658 529 aa21.01■□□□□ 0.95
PTP4A3-201ENST00000329397 LRRC37A3O60309 1634 aa21.01■□□□□ 0.95
PTP4A3-201ENST00000329397 MBD3O95983 291 aa21.01■□□□□ 0.95
PTP4A3-201ENST00000329397 NOL7Q9UMY1 257 aaKnown RBP21.01■□□□□ 0.95
PTP4A3-201ENST00000329397 CNPY2Q9Y2B0 182 aa21■□□□□ 0.95
PTP4A3-201ENST00000329397 SNX14Q9Y5W7 946 aa21■□□□□ 0.95
PTP4A3-201ENST00000329397 HTATSF1O43719 755 aaKnown RBP21■□□□□ 0.95
PTP4A3-201ENST00000329397 INTS4Q96HW7 963 aaKnown RBP21■□□□□ 0.95
PTP4A3-201ENST00000329397 OS9Q13438 667 aaPredicted RBP20.99■□□□□ 0.95
PTP4A3-201ENST00000329397 SGSM2O43147 1006 aa20.99■□□□□ 0.95
PTP4A3-201ENST00000329397 LARGE1O95461 756 aa20.99■□□□□ 0.95
PTP4A3-201ENST00000329397 AK2P54819 239 aa20.99■□□□□ 0.95
PTP4A3-201ENST00000329397 LRRC59Q96AG4 307 aaKnown RBP20.98■□□□□ 0.95
PTP4A3-201ENST00000329397 RPAP1Q9BWH6 1393 aaPredicted RBP20.98■□□□□ 0.95
PTP4A3-201ENST00000329397 NBPF6Q5VWK0 638 aa20.98■□□□□ 0.95
PTP4A3-201ENST00000329397 NBPF4Q96M43 638 aa20.98■□□□□ 0.95
PTP4A3-201ENST00000329397 TSPY26PQ9H489 355 aa20.98■□□□□ 0.95
PTP4A3-201ENST00000329397 PA2G4Q9UQ80 394 aaKnown RBP20.98■□□□□ 0.95
PTP4A3-201ENST00000329397 RAD50Q92878 1312 aa20.98■□□□□ 0.95
PTP4A3-201ENST00000329397 MPRIPQ6WCQ1 1025 aa20.97■□□□□ 0.95
PTP4A3-201ENST00000329397 CACNA1FO60840 1977 aa20.97■□□□□ 0.95
PTP4A3-201ENST00000329397 POLA2Q14181 598 aa20.97■□□□□ 0.95
PTP4A3-201ENST00000329397 LSG1Q9H089 658 aaKnown RBP20.97■□□□□ 0.95
PTP4A3-201ENST00000329397 RUFY3Q7L099 469 aa20.97■□□□□ 0.95
PTP4A3-201ENST00000329397 ZKSCAN5Q9Y2L8 839 aa20.97■□□□□ 0.95
PTP4A3-201ENST00000329397 RRP9O43818 475 aaKnown RBP20.96■□□□□ 0.95
PTP4A3-201ENST00000329397 EIF4A1P60842 406 aaKnown RBP20.96■□□□□ 0.95
PTP4A3-201ENST00000329397 DNAAF4Q8WXU2 420 aa20.96■□□□□ 0.95
PTP4A3-201ENST00000329397 KIF13AQ9H1H9 1805 aa20.96■□□□□ 0.95
PTP4A3-201ENST00000329397 PRAMEF22A3QJZ6 481 aa20.96■□□□□ 0.95
PTP4A3-201ENST00000329397 FIBPO43427 364 aa20.96■□□□□ 0.95
PTP4A3-201ENST00000329397 BEND3Q5T5X7 828 aa20.96■□□□□ 0.95
PTP4A3-201ENST00000329397 KIF1BPQ96EK5 621 aa20.96■□□□□ 0.95
PTP4A3-201ENST00000329397 WDR33Q9C0J8 1336 aaKnown RBP20.95■□□□□ 0.94
PTP4A3-201ENST00000329397 PTMAP06454 111 aaKnown RBP20.95■□□□□ 0.94
PTP4A3-201ENST00000329397 CASTP20810 708 aaKnown RBP20.95■□□□□ 0.94
PTP4A3-201ENST00000329397 COL9A3Q14050 684 aaPredicted RBP20.95■□□□□ 0.94
PTP4A3-201ENST00000329397 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.95■□□□□ 0.94
PTP4A3-201ENST00000329397 TPM2P07951 284 aa20.95■□□□□ 0.94
PTP4A3-201ENST00000329397 PTH1RQ03431 593 aa20.95■□□□□ 0.94
PTP4A3-201ENST00000329397 ADCK5Q3MIX3 580 aa20.95■□□□□ 0.94
PTP4A3-201ENST00000329397 ZNF830Q96NB3 372 aaPredicted RBP20.95■□□□□ 0.94
PTP4A3-201ENST00000329397 PROSER3Q2NL68 480 aa20.94■□□□□ 0.94
PTP4A3-201ENST00000329397 CNTROBQ8N137 903 aa20.94■□□□□ 0.94
PTP4A3-201ENST00000329397 TBX22Q9Y458 520 aa20.94■□□□□ 0.94
PTP4A3-201ENST00000329397 MARF1Q9Y4F3 1742 aaKnown RBP20.94■□□□□ 0.94
PTP4A3-201ENST00000329397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.94■□□□□ 0.94
PTP4A3-201ENST00000329397 RAB11FIP3O75154 756 aa20.93■□□□□ 0.94
PTP4A3-201ENST00000329397 CWF19L2Q2TBE0 894 aaKnown RBP20.93■□□□□ 0.94
PTP4A3-201ENST00000329397 TTC14Q96N46 770 aa20.93■□□□□ 0.94
PTP4A3-201ENST00000329397 ARID3AQ99856 593 aa20.93■□□□□ 0.94
PTP4A3-201ENST00000329397 SYT1P21579 422 aa20.93■□□□□ 0.94
PTP4A3-201ENST00000329397 CCDC83Q8IWF9 413 aa20.93■□□□□ 0.94
PTP4A3-201ENST00000329397 AOX1Q06278 1338 aa20.93■□□□□ 0.94
PTP4A3-201ENST00000329397 DHX37Q8IY37 1157 aaKnown RBP20.92■□□□□ 0.94
PTP4A3-201ENST00000329397 USP25Q9UHP3 1055 aa20.92■□□□□ 0.94
PTP4A3-201ENST00000329397 HS1BP3Q53T59 392 aa20.92■□□□□ 0.94
PTP4A3-201ENST00000329397 PRPF40BQ6NWY9 871 aaKnown RBP20.92■□□□□ 0.94
PTP4A3-201ENST00000329397 ZNF500O60304 480 aaPredicted RBP20.91■□□□□ 0.94
PTP4A3-201ENST00000329397 ADCY9O60503 1353 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms