RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 C4AP0C0L4 1744 aa36.48■■■■□ 3.43
ATPAF1-201ENST00000329231 SRP68Q9UHB9 627 aaKnown RBP36.47■■■■□ 3.43
ATPAF1-201ENST00000329231 ZPR1O75312 459 aa36.46■■■■□ 3.43
ATPAF1-201ENST00000329231 COL15A1P39059 1388 aa36.45■■■■□ 3.43
ATPAF1-201ENST00000329231 CANXP27824 592 aaKnown RBP36.45■■■■□ 3.43
ATPAF1-201ENST00000329231 GPR162Q16538 588 aa36.45■■■■□ 3.43
ATPAF1-201ENST00000329231 DLG5Q8TDM6 1919 aa36.45■■■■□ 3.43
ATPAF1-201ENST00000329231 PNISRQ8TF01 805 aaKnown RBP36.44■■■■□ 3.42
ATPAF1-201ENST00000329231 RIPK4P57078 832 aa36.42■■■■□ 3.42
ATPAF1-201ENST00000329231 PARP3Q9Y6F1 533 aa36.42■■■■□ 3.42
ATPAF1-201ENST00000329231 SNRPA1P09661 255 aaKnown RBP36.41■■■■□ 3.42
ATPAF1-201ENST00000329231 FKBP8Q14318 412 aa36.41■■■■□ 3.42
ATPAF1-201ENST00000329231 NARFQ9UHQ1 456 aa36.41■■■■□ 3.42
ATPAF1-201ENST00000329231 PELP1Q8IZL8 1130 aaKnown RBP36.4■■■■□ 3.42
ATPAF1-201ENST00000329231 A0A087WZG4 1122 aa36.39■■■■□ 3.42
ATPAF1-201ENST00000329231 TMPOP42166 694 aaKnown RBP36.39■■■■□ 3.42
ATPAF1-201ENST00000329231 EIF5P55010 431 aaKnown RBP36.39■■■■□ 3.42
ATPAF1-201ENST00000329231 USPL1Q5W0Q7 1092 aa36.39■■■■□ 3.42
ATPAF1-201ENST00000329231 CCDC146Q8IYE0 955 aa36.39■■■■□ 3.42
ATPAF1-201ENST00000329231 THUMPD2Q9BTF0 503 aaKnown RBP36.39■■■■□ 3.42
ATPAF1-201ENST00000329231 MIS18AQ9NYP9 233 aa36.39■■■■□ 3.42
ATPAF1-201ENST00000329231 ADAMTS8Q9UP79 889 aa36.39■■■■□ 3.42
ATPAF1-201ENST00000329231 LMOD3Q0VAK6 560 aa36.38■■■■□ 3.41
ATPAF1-201ENST00000329231 RUNDC1Q96C34 613 aa36.38■■■■□ 3.41
ATPAF1-201ENST00000329231 IL6STP40189 918 aaPredicted RBP36.36■■■■□ 3.41
ATPAF1-201ENST00000329231 USP16Q9Y5T5 823 aa36.36■■■■□ 3.41
ATPAF1-201ENST00000329231 A1BGP04217 495 aa36.35■■■■□ 3.41
ATPAF1-201ENST00000329231 YY1P25490 414 aa36.35■■■■□ 3.41
ATPAF1-201ENST00000329231 NPM2Q86SE8 214 aaKnown RBP36.35■■■■□ 3.41
ATPAF1-201ENST00000329231 ZNF330Q9Y3S2 320 aaPredicted RBP36.33■■■■□ 3.41
ATPAF1-201ENST00000329231 PRAMEF22A3QJZ6 481 aa36.32■■■■□ 3.4
ATPAF1-201ENST00000329231 TM4SF1P30408 202 aa36.31■■■■□ 3.4
ATPAF1-201ENST00000329231 RRP7AQ9Y3A4 280 aaKnown RBP36.31■■■■□ 3.4
ATPAF1-201ENST00000329231 DDR1Q08345 913 aa36.3■■■■□ 3.4
ATPAF1-201ENST00000329231 NEUROD2Q15784 382 aa36.3■■■■□ 3.4
ATPAF1-201ENST00000329231 C10orf71Q711Q0 1435 aa36.3■■■■□ 3.4
ATPAF1-201ENST00000329231 GRIN3BO60391 1043 aa36.29■■■■□ 3.4
ATPAF1-201ENST00000329231 YBX3P16989 372 aaKnown RBP eCLIP36.28■■■■□ 3.4
ATPAF1-201ENST00000329231 TGFB2P61812 414 aa36.28■■■■□ 3.4
ATPAF1-201ENST00000329231 BCL2L12Q9HB09 334 aa36.28■■■■□ 3.4
ATPAF1-201ENST00000329231 POLRMTO00411 1230 aaKnown RBP36.27■■■■□ 3.4
ATPAF1-201ENST00000329231 EIF4A1P60842 406 aaKnown RBP36.27■■■■□ 3.4
ATPAF1-201ENST00000329231 KDM3BQ7LBC6 1761 aa36.27■■■■□ 3.4
ATPAF1-201ENST00000329231 ANP32CO43423 234 aa36.26■■■■□ 3.4
ATPAF1-201ENST00000329231 NFIXQ14938 502 aa36.26■■■■□ 3.4
ATPAF1-201ENST00000329231 BABAM1Q9NWV8 329 aa36.26■■■■□ 3.4
ATPAF1-201ENST00000329231 TSPYL4Q9UJ04 414 aa36.26■■■■□ 3.4
ATPAF1-201ENST00000329231 TBC1D2BQ9UPU7 963 aa36.26■■■■□ 3.4
ATPAF1-201ENST00000329231 KIF13BQ9NQT8 1826 aa36.24■■■■□ 3.39
ATPAF1-201ENST00000329231 GIGYF1O75420 1035 aaPredicted RBP36.24■■■■□ 3.39
ATPAF1-201ENST00000329231 PIP4K2AP48426 406 aaPredicted RBP36.22■■■■□ 3.39
ATPAF1-201ENST00000329231 PXDNLA1KZ92 1463 aa36.22■■■■□ 3.39
ATPAF1-201ENST00000329231 UTRNP46939 3433 aa36.21■■■■□ 3.39
ATPAF1-201ENST00000329231 DZIP3Q86Y13 1208 aaKnown RBP36.2■■■■□ 3.39
ATPAF1-201ENST00000329231 TRIM35Q9UPQ4 493 aa36.2■■■■□ 3.39
ATPAF1-201ENST00000329231 A0A0G2JLW4 131 aa36.18■■■■□ 3.38
ATPAF1-201ENST00000329231 NBPF26B4DH59 902 aa36.18■■■■□ 3.38
ATPAF1-201ENST00000329231 CAMTA2O94983 1202 aa36.18■■■■□ 3.38
ATPAF1-201ENST00000329231 NBPF10Q6P3W6 841 aaKnown RBP36.18■■■■□ 3.38
ATPAF1-201ENST00000329231 NBPF15Q8N660 670 aa36.18■■■■□ 3.38
ATPAF1-201ENST00000329231 WWC3Q9ULE0 1092 aa36.18■■■■□ 3.38
ATPAF1-201ENST00000329231 SERPINB2P05120 415 aa36.17■■■■□ 3.38
ATPAF1-201ENST00000329231 BICDL1Q6ZP65 573 aa36.17■■■■□ 3.38
ATPAF1-201ENST00000329231 CHD4Q14839 1912 aa36.16■■■■□ 3.38
ATPAF1-201ENST00000329231 DPEP1P16444 411 aa36.16■■■■□ 3.38
ATPAF1-201ENST00000329231 CCDC184Q52MB2 194 aa36.16■■■■□ 3.38
ATPAF1-201ENST00000329231 TBC1D9BQ66K14 1250 aa36.16■■■■□ 3.38
ATPAF1-201ENST00000329231 SCN7AQ01118 1682 aa36.16■■■■□ 3.38
ATPAF1-201ENST00000329231 GOLGB1Q14789 3259 aaKnown RBP36.16■■■■□ 3.38
ATPAF1-201ENST00000329231 LAMB4A4D0S4 1761 aa36.15■■■■□ 3.38
ATPAF1-201ENST00000329231 APAF1O14727 1248 aa36.14■■■■□ 3.38
ATPAF1-201ENST00000329231 KIAA1551Q9HCM1 1747 aa36.13■■■■□ 3.37
ATPAF1-201ENST00000329231 CHL1O00533 1208 aa36.11■■■■□ 3.37
ATPAF1-201ENST00000329231 CLEC4GQ6UXB4 293 aa36.11■■■■□ 3.37
ATPAF1-201ENST00000329231 ZNF652Q9Y2D9 606 aa36.11■■■■□ 3.37
ATPAF1-201ENST00000329231 N4BP2Q86UW6 1770 aaPredicted RBP36.11■■■■□ 3.37
ATPAF1-201ENST00000329231 SETDB2Q96T68 719 aa36.1■■■■□ 3.37
ATPAF1-201ENST00000329231 MRS2Q9HD23 443 aa36.1■■■■□ 3.37
ATPAF1-201ENST00000329231 LAS1LQ9Y4W2 734 aaKnown RBP36.1■■■■□ 3.37
ATPAF1-201ENST00000329231 CARMIL3Q8ND23 1372 aa36.1■■■■□ 3.37
ATPAF1-201ENST00000329231 BCS1LQ9Y276 419 aa36.09■■■■□ 3.37
ATPAF1-201ENST00000329231 NRXN2Q9P2S2 1712 aa36.08■■■■□ 3.37
ATPAF1-201ENST00000329231 RGL2O15211 777 aa36.08■■■■□ 3.37
ATPAF1-201ENST00000329231 KCNA3P22001 575 aa36.08■■■■□ 3.37
ATPAF1-201ENST00000329231 PIM2Q9P1W9 311 aa36.08■■■■□ 3.37
ATPAF1-201ENST00000329231 ERBB4Q15303 1308 aa36.08■■■■□ 3.37
ATPAF1-201ENST00000329231 AFDNP55196 1824 aaKnown RBP36.07■■■■□ 3.36
ATPAF1-201ENST00000329231 BCORQ6W2J9 1755 aa36.06■■■■□ 3.36
ATPAF1-201ENST00000329231 CHRNA5P30532 468 aa36.04■■■■□ 3.36
ATPAF1-201ENST00000329231 CALD1Q05682 793 aaKnown RBP36.04■■■■□ 3.36
ATPAF1-201ENST00000329231 NGEFQ8N5V2 710 aa36.04■■■■□ 3.36
ATPAF1-201ENST00000329231 CFAP44Q96MT7 982 aa36.04■■■■□ 3.36
ATPAF1-201ENST00000329231 MYL6BP14649 208 aa36.03■■■■□ 3.36
ATPAF1-201ENST00000329231 EIF2S2P20042 333 aaKnown RBP36.03■■■■□ 3.36
ATPAF1-201ENST00000329231 NPHP1O15259 732 aa36.01■■■■□ 3.36
ATPAF1-201ENST00000329231 DALRD3Q5D0E6 543 aaKnown RBP36.01■■■■□ 3.36
ATPAF1-201ENST00000329231 PRR5LQ6MZQ0 368 aa36■■■■□ 3.35
ATPAF1-201ENST00000329231 KIF6Q6ZMV9 814 aa36■■■■□ 3.35
ATPAF1-201ENST00000329231 CNBD1Q8NA66 436 aa36■■■■□ 3.35
ATPAF1-201ENST00000329231 ZNF784Q8NCA9 323 aaPredicted RBP36■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms