RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 RAD50Q92878 1312 aa20.15■□□□□ 0.82
SSH1-201ENST00000326470 TTC14Q96N46 770 aa20.15■□□□□ 0.82
SSH1-201ENST00000326470 ZNF830Q96NB3 372 aaPredicted RBP20.15■□□□□ 0.82
SSH1-201ENST00000326470 SOS1Q07889 1333 aaPredicted RBP20.15■□□□□ 0.82
SSH1-201ENST00000326470 NALCNQ8IZF0 1738 aa20.15■□□□□ 0.82
SSH1-201ENST00000326470 SMAP1Q8IYB5 467 aaPredicted RBP20.14■□□□□ 0.82
SSH1-201ENST00000326470 XRN1Q8IZH2 1706 aaKnown RBP20.14■□□□□ 0.81
SSH1-201ENST00000326470 KDRP35968 1356 aa20.14■□□□□ 0.81
SSH1-201ENST00000326470 GTF2F1P35269 517 aaKnown RBP eCLIP20.14■□□□□ 0.81
SSH1-201ENST00000326470 TCHHQ07283 1943 aa20.14■□□□□ 0.81
SSH1-201ENST00000326470 PLEKHG3A1L390 1219 aa20.13■□□□□ 0.81
SSH1-201ENST00000326470 SGSM2O43147 1006 aa20.13■□□□□ 0.81
SSH1-201ENST00000326470 HCLS1P14317 486 aaPredicted RBP20.13■□□□□ 0.81
SSH1-201ENST00000326470 TTC12Q9H892 705 aaPredicted RBP20.13■□□□□ 0.81
SSH1-201ENST00000326470 SNX14Q9Y5W7 946 aa20.13■□□□□ 0.81
SSH1-201ENST00000326470 TMEM2Q9UHN6 1383 aa20.13■□□□□ 0.81
SSH1-201ENST00000326470 USP6P35125 1406 aa20.13■□□□□ 0.81
SSH1-201ENST00000326470 STX6O43752 255 aa20.13■□□□□ 0.81
SSH1-201ENST00000326470 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
SSH1-201ENST00000326470 MPNDQ8N594 471 aa20.13■□□□□ 0.81
SSH1-201ENST00000326470 SSH3Q8TE77 659 aa20.13■□□□□ 0.81
SSH1-201ENST00000326470 USP44Q9H0E7 712 aa20.13■□□□□ 0.81
SSH1-201ENST00000326470 IL1RAPL2Q9NP60 686 aa20.13■□□□□ 0.81
SSH1-201ENST00000326470 SPTLC3Q9NUV7 552 aa20.13■□□□□ 0.81
SSH1-201ENST00000326470 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.13■□□□□ 0.81
SSH1-201ENST00000326470 RAB11FIP3O75154 756 aa20.12■□□□□ 0.81
SSH1-201ENST00000326470 KDM4AO75164 1064 aa20.12■□□□□ 0.81
SSH1-201ENST00000326470 SYT1P21579 422 aa20.12■□□□□ 0.81
SSH1-201ENST00000326470 CCDC94Q9BW85 323 aaPredicted RBP20.12■□□□□ 0.81
SSH1-201ENST00000326470 HTATSF1O43719 755 aaKnown RBP20.12■□□□□ 0.81
SSH1-201ENST00000326470 NUTM1Q86Y26 1132 aa20.12■□□□□ 0.81
SSH1-201ENST00000326470 LIMCH1Q9UPQ0 1083 aa20.12■□□□□ 0.81
SSH1-201ENST00000326470 ATP6V1DQ9Y5K8 247 aa20.12■□□□□ 0.81
SSH1-201ENST00000326470 UBTFL1P0CB47 393 aaPredicted RBP20.11■□□□□ 0.81
SSH1-201ENST00000326470 CEBPAP49715 358 aaPredicted RBP20.11■□□□□ 0.81
SSH1-201ENST00000326470 AK2P54819 239 aa20.11■□□□□ 0.81
SSH1-201ENST00000326470 PI4K2BQ8TCG2 481 aa20.11■□□□□ 0.81
SSH1-201ENST00000326470 UBR1Q8IWV7 1749 aa20.11■□□□□ 0.81
SSH1-201ENST00000326470 FAM208AQ9UK61 1670 aaKnown RBP20.11■□□□□ 0.81
SSH1-201ENST00000326470 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
SSH1-201ENST00000326470 F13A1P00488 732 aa20.11■□□□□ 0.81
SSH1-201ENST00000326470 LSG1Q9H089 658 aaKnown RBP20.11■□□□□ 0.81
SSH1-201ENST00000326470 RUFY3Q7L099 469 aa20.1■□□□□ 0.81
SSH1-201ENST00000326470 FUCA2Q9BTY2 467 aa20.1■□□□□ 0.81
SSH1-201ENST00000326470 ROBO2Q9HCK4 1378 aa20.1■□□□□ 0.81
SSH1-201ENST00000326470 SOX12O15370 315 aa20.1■□□□□ 0.81
SSH1-201ENST00000326470 RIMS1Q86UR5 1692 aaKnown RBP20.09■□□□□ 0.81
SSH1-201ENST00000326470 RASEFQ8IZ41 740 aa20.09■□□□□ 0.81
SSH1-201ENST00000326470 ARID3AQ99856 593 aa20.09■□□□□ 0.81
SSH1-201ENST00000326470 SMC3Q9UQE7 1217 aa20.09■□□□□ 0.81
SSH1-201ENST00000326470 FLT4P35916 1363 aa20.09■□□□□ 0.81
SSH1-201ENST00000326470 IGSF1Q8N6C5 1336 aa20.09■□□□□ 0.81
SSH1-201ENST00000326470 ZBTB7CA1YPR0 619 aa20.08■□□□□ 0.81
SSH1-201ENST00000326470 NECTIN2Q92692 538 aa20.08■□□□□ 0.81
SSH1-201ENST00000326470 TOPAZ1Q8N9V7 1692 aa20.08■□□□□ 0.81
SSH1-201ENST00000326470 SBNO1A3KN83 1393 aa20.08■□□□□ 0.81
SSH1-201ENST00000326470 MAP4K4O95819 1239 aaPredicted RBP20.08■□□□□ 0.8
SSH1-201ENST00000326470 POLA2Q14181 598 aa20.08■□□□□ 0.8
SSH1-201ENST00000326470 RHPN1Q8TCX5 695 aa20.08■□□□□ 0.8
SSH1-201ENST00000326470 N4BP2Q86UW6 1770 aaPredicted RBP20.08■□□□□ 0.8
SSH1-201ENST00000326470 SURF6O75683 361 aaKnown RBP20.07■□□□□ 0.8
SSH1-201ENST00000326470 ZNF710Q8N1W2 664 aa20.07■□□□□ 0.8
SSH1-201ENST00000326470 C17orf53Q8N3J3 647 aaPredicted RBP20.07■□□□□ 0.8
SSH1-201ENST00000326470 EYA1Q99502 592 aa20.07■□□□□ 0.8
SSH1-201ENST00000326470 FIBPO43427 364 aa20.07■□□□□ 0.8
SSH1-201ENST00000326470 PPP1R42Q7Z4L9 355 aa20.07■□□□□ 0.8
SSH1-201ENST00000326470 CNTROBQ8N137 903 aa20.07■□□□□ 0.8
SSH1-201ENST00000326470 LRRC37A3O60309 1634 aa20.07■□□□□ 0.8
SSH1-201ENST00000326470 JARID2Q92833 1246 aaPredicted RBP20.06■□□□□ 0.8
SSH1-201ENST00000326470 CACNA1FO60840 1977 aa20.06■□□□□ 0.8
SSH1-201ENST00000326470 CEP170BQ9Y4F5 1589 aaPredicted RBP20.06■□□□□ 0.8
SSH1-201ENST00000326470 GIMAP6Q6P9H5 292 aa20.05■□□□□ 0.8
SSH1-201ENST00000326470 KIF1BPQ96EK5 621 aa20.05■□□□□ 0.8
SSH1-201ENST00000326470 KIF3AQ9Y496 699 aa20.05■□□□□ 0.8
SSH1-201ENST00000326470 FMN2Q9NZ56 1722 aa20.05■□□□□ 0.8
SSH1-201ENST00000326470 GNAT3A8MTJ3 354 aa20.05■□□□□ 0.8
SSH1-201ENST00000326470 TPRNQ4KMQ1 711 aa20.05■□□□□ 0.8
SSH1-201ENST00000326470 TSC1Q92574 1164 aa20.05■□□□□ 0.8
SSH1-201ENST00000326470 LARP6Q9BRS8 491 aaKnown RBP20.05■□□□□ 0.8
SSH1-201ENST00000326470 FER1L4A9Z1Z3 1794 aa20.04■□□□□ 0.8
SSH1-201ENST00000326470 TPM3P06753 285 aa20.04■□□□□ 0.8
SSH1-201ENST00000326470 HYPKQ9NX55 129 aa20.04■□□□□ 0.8
SSH1-201ENST00000326470 TTC21AQ8NDW8 1320 aa20.04■□□□□ 0.8
SSH1-201ENST00000326470 PLEKHG1Q9ULL1 1385 aa20.04■□□□□ 0.8
SSH1-201ENST00000326470 NUTM2FA1L443 756 aa20.04■□□□□ 0.8
SSH1-201ENST00000326470 KIAA1524Q8TCG1 905 aa20.04■□□□□ 0.8
SSH1-201ENST00000326470 BABAM1Q9NWV8 329 aa20.04■□□□□ 0.8
SSH1-201ENST00000326470 MTMR6Q9Y217 621 aa20.04■□□□□ 0.8
SSH1-201ENST00000326470 EID1Q9Y6B2 187 aa20.04■□□□□ 0.8
SSH1-201ENST00000326470 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.03■□□□□ 0.8
SSH1-201ENST00000326470 MAP3K5Q99683 1374 aa20.03■□□□□ 0.8
SSH1-201ENST00000326470 AP5Z1O43299 807 aa20.03■□□□□ 0.8
SSH1-201ENST00000326470 CASTP20810 708 aaKnown RBP20.03■□□□□ 0.8
SSH1-201ENST00000326470 DNM1Q05193 864 aaKnown RBP20.03■□□□□ 0.8
SSH1-201ENST00000326470 CWC27Q6UX04 472 aaKnown RBP20.03■□□□□ 0.8
SSH1-201ENST00000326470 LARGE1O95461 756 aa20.02■□□□□ 0.8
SSH1-201ENST00000326470 GJB2P29033 226 aa20.02■□□□□ 0.8
SSH1-201ENST00000326470 AMPHP49418 695 aa20.02■□□□□ 0.79
SSH1-201ENST00000326470 PLCB2Q00722 1185 aa20.02■□□□□ 0.79
SSH1-201ENST00000326470 VPS53Q5VIR6 699 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms