RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 RRP12Q5JTH9 1297 aaKnown RBP18.13■□□□□ 0.49
VARS2-201ENST00000321897 CCDC112Q8NEF3 446 aa18.12■□□□□ 0.49
VARS2-201ENST00000321897 ADCY5O95622 1261 aa18.12■□□□□ 0.49
VARS2-201ENST00000321897 NFXL1Q6ZNB6 911 aa18.12■□□□□ 0.49
VARS2-201ENST00000321897 FILIP1Q7Z7B0 1213 aa18.12■□□□□ 0.49
VARS2-201ENST00000321897 DDX17Q92841 729 aaKnown RBP18.12■□□□□ 0.49
VARS2-201ENST00000321897 SDF4Q9BRK5 362 aa18.12■□□□□ 0.49
VARS2-201ENST00000321897 CKAP2LQ8IYA6 745 aa18.12■□□□□ 0.49
VARS2-201ENST00000321897 PTPRCP08575 1304 aa18.12■□□□□ 0.49
VARS2-201ENST00000321897 WDR33Q9C0J8 1336 aaKnown RBP18.12■□□□□ 0.49
VARS2-201ENST00000321897 ARHGEF5Q12774 1597 aa18.12■□□□□ 0.49
VARS2-201ENST00000321897 SKIDA1Q1XH10 827 aa18.11■□□□□ 0.49
VARS2-201ENST00000321897 ANTXR1Q9H6X2 564 aa18.11■□□□□ 0.49
VARS2-201ENST00000321897 TNRQ92752 1358 aa18.11■□□□□ 0.49
VARS2-201ENST00000321897 FSD2A1L4K1 749 aa18.11■□□□□ 0.49
VARS2-201ENST00000321897 MCM2P49736 904 aa18.11■□□□□ 0.49
VARS2-201ENST00000321897 KCNQ3O43525 872 aa18.11■□□□□ 0.49
VARS2-201ENST00000321897 UHRF1BP1LA0JNW5 1464 aa18.1■□□□□ 0.49
VARS2-201ENST00000321897 ZMYM3Q14202 1370 aa18.1■□□□□ 0.49
VARS2-201ENST00000321897 PES1O00541 588 aaKnown RBP18.1■□□□□ 0.49
VARS2-201ENST00000321897 RALYLQ86SE5 291 aaKnown RBP18.09■□□□□ 0.49
VARS2-201ENST00000321897 GLRX3O76003 335 aaKnown RBP18.09■□□□□ 0.49
VARS2-201ENST00000321897 NBPF7P0C2Y1 421 aaPredicted RBP18.09■□□□□ 0.49
VARS2-201ENST00000321897 RASSF8Q8NHQ8 419 aa18.09■□□□□ 0.49
VARS2-201ENST00000321897 ESYT1Q9BSJ8 1104 aa18.09■□□□□ 0.49
VARS2-201ENST00000321897 USP26Q9BXU7 913 aa18.09■□□□□ 0.49
VARS2-201ENST00000321897 PRDM15P57071 1507 aaPredicted RBP18.09■□□□□ 0.49
VARS2-201ENST00000321897 A0A087WZG4 1122 aa18.08■□□□□ 0.49
VARS2-201ENST00000321897 DDX46Q7L014 1031 aaKnown RBP18.08■□□□□ 0.49
VARS2-201ENST00000321897 ANKRD24Q8TF21 1146 aa18.08■□□□□ 0.49
VARS2-201ENST00000321897 USP19O94966 1318 aa18.08■□□□□ 0.49
VARS2-201ENST00000321897 CCT2P78371 535 aaKnown RBP18.08■□□□□ 0.49
VARS2-201ENST00000321897 SIRT2Q8IXJ6 389 aa18.08■□□□□ 0.49
VARS2-201ENST00000321897 ZBTB9Q96C00 473 aa18.08■□□□□ 0.49
VARS2-201ENST00000321897 DBF4Q9UBU7 674 aaPredicted RBP18.08■□□□□ 0.49
VARS2-201ENST00000321897 CCDC82Q8N4S0 544 aa18.08■□□□□ 0.48
VARS2-201ENST00000321897 ORAI2Q96SN7 254 aa18.08■□□□□ 0.48
VARS2-201ENST00000321897 NOLC1Q14978 699 aaKnown RBP eCLIP18.08■□□□□ 0.48
VARS2-201ENST00000321897 LRSAM1Q6UWE0 723 aa18.08■□□□□ 0.48
VARS2-201ENST00000321897 PSMA5P28066 241 aa18.07■□□□□ 0.48
VARS2-201ENST00000321897 TRDNQ13061 729 aa18.07■□□□□ 0.48
VARS2-201ENST00000321897 FAM173BQ6P4H8 233 aa18.07■□□□□ 0.48
VARS2-201ENST00000321897 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.07■□□□□ 0.486e-8■■■■□ 19.5
VARS2-201ENST00000321897 V9GYY5 206 aaPredicted RBP18.07■□□□□ 0.48
VARS2-201ENST00000321897 METP08581 1390 aa18.07■□□□□ 0.48
VARS2-201ENST00000321897 GPTP24298 496 aa18.07■□□□□ 0.48
VARS2-201ENST00000321897 POGZQ7Z3K3 1410 aa18.07■□□□□ 0.48
VARS2-201ENST00000321897 CHL1O00533 1208 aa18.07■□□□□ 0.48
VARS2-201ENST00000321897 HAND2P61296 217 aa18.07■□□□□ 0.48
VARS2-201ENST00000321897 COPS6Q7L5N1 327 aa18.07■□□□□ 0.48
VARS2-201ENST00000321897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.07■□□□□ 0.48
VARS2-201ENST00000321897 GIMAP6Q6P9H5 292 aa18.06■□□□□ 0.48
VARS2-201ENST00000321897 CCDC66A2RUB6 948 aa18.06■□□□□ 0.48
VARS2-201ENST00000321897 CCDC73Q6ZRK6 1079 aa18.06■□□□□ 0.48
VARS2-201ENST00000321897 FAM177A1Q8N128 213 aaPredicted RBP18.06■□□□□ 0.48
VARS2-201ENST00000321897 CNPY2Q9Y2B0 182 aa18.06■□□□□ 0.48
VARS2-201ENST00000321897 PLCD3Q8N3E9 789 aa18.05■□□□□ 0.48
VARS2-201ENST00000321897 NFATC2IPQ8NCF5 419 aa18.05■□□□□ 0.48
VARS2-201ENST00000321897 CCDC192P0DO97 292 aa18.05■□□□□ 0.48
VARS2-201ENST00000321897 ME1P48163 572 aa18.05■□□□□ 0.48
VARS2-201ENST00000321897 ATP8B2P98198 1209 aa18.05■□□□□ 0.48
VARS2-201ENST00000321897 KRT28Q7Z3Y7 464 aa18.05■□□□□ 0.48
VARS2-201ENST00000321897 MNS1Q8NEH6 495 aa18.05■□□□□ 0.48
VARS2-201ENST00000321897 ECHDC1Q9NTX5 307 aa18.05■□□□□ 0.48
VARS2-201ENST00000321897 ERC1Q8IUD2 1116 aa18.04■□□□□ 0.48
VARS2-201ENST00000321897 XAGE3Q8WTP9 111 aa18.04■□□□□ 0.48
VARS2-201ENST00000321897 CNNM1Q9NRU3 951 aa18.04■□□□□ 0.48
VARS2-201ENST00000321897 VGLL3A8MV65 326 aa18.04■□□□□ 0.48
VARS2-201ENST00000321897 HSP90AB3PQ58FF7 597 aa18.04■□□□□ 0.48
VARS2-201ENST00000321897 SNX21Q969T3 373 aa18.04■□□□□ 0.48
VARS2-201ENST00000321897 TRMT1Q9NXH9 659 aaKnown RBP18.04■□□□□ 0.48
VARS2-201ENST00000321897 GJB2P29033 226 aa18.04■□□□□ 0.48
VARS2-201ENST00000321897 HOXC9P31274 260 aa18.04■□□□□ 0.48
VARS2-201ENST00000321897 CHST3Q7LGC8 479 aa18.04■□□□□ 0.48
VARS2-201ENST00000321897 MYO5CQ9NQX4 1742 aa18.04■□□□□ 0.48
VARS2-201ENST00000321897 PIBF1Q8WXW3 757 aa18.03■□□□□ 0.48
VARS2-201ENST00000321897 SPATA32Q96LK8 384 aa18.03■□□□□ 0.48
VARS2-201ENST00000321897 KRT85P78386 507 aa18.03■□□□□ 0.48
VARS2-201ENST00000321897 TNMDQ9H2S6 317 aa18.03■□□□□ 0.48
VARS2-201ENST00000321897 NOL7Q9UMY1 257 aaKnown RBP18.03■□□□□ 0.48
VARS2-201ENST00000321897 RAD21O60216 631 aa18.03■□□□□ 0.48
VARS2-201ENST00000321897 EDC3Q96F86 508 aaKnown RBP18.03■□□□□ 0.48
VARS2-201ENST00000321897 PALD1Q9ULE6 856 aa18.03■□□□□ 0.48
VARS2-201ENST00000321897 GOLIM4O00461 696 aa18.03■□□□□ 0.48
VARS2-201ENST00000321897 IDH1O75874 414 aaKnown RBP18.03■□□□□ 0.48
VARS2-201ENST00000321897 SYNE3Q6ZMZ3 975 aa18.03■□□□□ 0.48
VARS2-201ENST00000321897 RBM25P49756 843 aaKnown RBP18.02■□□□□ 0.48
VARS2-201ENST00000321897 CCDC94Q9BW85 323 aaPredicted RBP18.02■□□□□ 0.48
VARS2-201ENST00000321897 LIMCH1Q9UPQ0 1083 aa18.02■□□□□ 0.48
VARS2-201ENST00000321897 CHMLP26374 656 aa18.02■□□□□ 0.48
VARS2-201ENST00000321897 TPM4P67936 248 aa18.02■□□□□ 0.48
VARS2-201ENST00000321897 VPS37DQ86XT2 251 aa18.02■□□□□ 0.48
VARS2-201ENST00000321897 KCNH5Q8NCM2 988 aa18.02■□□□□ 0.48
VARS2-201ENST00000321897 CCDC57Q2TAC2 916 aa18.01■□□□□ 0.47
VARS2-201ENST00000321897 NBPF6Q5VWK0 638 aa18.01■□□□□ 0.47
VARS2-201ENST00000321897 ZFP91Q96JP5 570 aaPredicted RBP18.01■□□□□ 0.47
VARS2-201ENST00000321897 NBPF4Q96M43 638 aa18.01■□□□□ 0.47
VARS2-201ENST00000321897 PUS7Q96PZ0 661 aaKnown RBP18.01■□□□□ 0.47
VARS2-201ENST00000321897 PRR36Q9H6K5 1346 aa18.01■□□□□ 0.47
VARS2-201ENST00000321897 TEX35Q5T0J7 233 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms