RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 MYBBP1AQ9BQG0 1328 aaKnown RBP28.28■■■□□ 2.12
UBE2D3-201ENST00000321805 PLEKHF1Q96S99 279 aa28.28■■■□□ 2.12
UBE2D3-201ENST00000321805 PARP3Q9Y6F1 533 aa28.28■■■□□ 2.12
UBE2D3-201ENST00000321805 ZPR1O75312 459 aa28.27■■■□□ 2.12
UBE2D3-201ENST00000321805 SRP68Q9UHB9 627 aaKnown RBP28.27■■■□□ 2.12
UBE2D3-201ENST00000321805 DLG5Q8TDM6 1919 aa28.26■■■□□ 2.11
UBE2D3-201ENST00000321805 YBX3P16989 372 aaKnown RBP eCLIP28.26■■■□□ 2.114e-8■□□□□ 8.6
UBE2D3-201ENST00000321805 MCM10Q7L590 875 aa28.26■■■□□ 2.11
UBE2D3-201ENST00000321805 NARFQ9UHQ1 456 aa28.25■■■□□ 2.11
UBE2D3-201ENST00000321805 MAPK8IP3Q9UPT6 1336 aa28.24■■■□□ 2.11
UBE2D3-201ENST00000321805 TGFB2P61812 414 aa28.24■■■□□ 2.11
UBE2D3-201ENST00000321805 FKBP8Q14318 412 aa28.24■■■□□ 2.11
UBE2D3-201ENST00000321805 PXDNLA1KZ92 1463 aa28.23■■■□□ 2.11
UBE2D3-201ENST00000321805 KIAA1551Q9HCM1 1747 aa28.23■■■□□ 2.11
UBE2D3-201ENST00000321805 A0A087WZG4 1122 aa28.22■■■□□ 2.11
UBE2D3-201ENST00000321805 EIF5P55010 431 aaKnown RBP28.22■■■□□ 2.11
UBE2D3-201ENST00000321805 NFE2L2Q16236 605 aa28.22■■■□□ 2.11
UBE2D3-201ENST00000321805 USPL1Q5W0Q7 1092 aa28.22■■■□□ 2.11
UBE2D3-201ENST00000321805 CANXP27824 592 aaKnown RBP28.2■■■□□ 2.1
UBE2D3-201ENST00000321805 IL6STP40189 918 aaPredicted RBP28.2■■■□□ 2.1
UBE2D3-201ENST00000321805 DCTN1Q14203 1278 aa28.2■■■□□ 2.1
UBE2D3-201ENST00000321805 TAF7Q15545 349 aaPredicted RBP28.2■■■□□ 2.1
UBE2D3-201ENST00000321805 KCNQ3O43525 872 aa28.19■■■□□ 2.1
UBE2D3-201ENST00000321805 TM4SF1P30408 202 aa28.19■■■□□ 2.1
UBE2D3-201ENST00000321805 DDR1Q08345 913 aa28.18■■■□□ 2.1
UBE2D3-201ENST00000321805 PNISRQ8TF01 805 aaKnown RBP28.18■■■□□ 2.1
UBE2D3-201ENST00000321805 SCN7AQ01118 1682 aa28.17■■■□□ 2.1
UBE2D3-201ENST00000321805 POLRMTO00411 1230 aaKnown RBP28.17■■■□□ 2.1
UBE2D3-201ENST00000321805 SNRPA1P09661 255 aaKnown RBP28.17■■■□□ 2.1
UBE2D3-201ENST00000321805 N4BP2Q86UW6 1770 aaPredicted RBP28.16■■■□□ 2.1
UBE2D3-201ENST00000321805 KDM3BQ7LBC6 1761 aa28.15■■■□□ 2.1
UBE2D3-201ENST00000321805 NPM2Q86SE8 214 aaKnown RBP28.15■■■□□ 2.1
UBE2D3-201ENST00000321805 ZNF784Q8NCA9 323 aaPredicted RBP28.15■■■□□ 2.1
UBE2D3-201ENST00000321805 NRXN2Q9P2S2 1712 aa28.15■■■□□ 2.1
UBE2D3-201ENST00000321805 PRKRIP1Q9H875 184 aaPredicted RBP28.14■■■□□ 2.1
UBE2D3-201ENST00000321805 BCL2L12Q9HB09 334 aa28.14■■■□□ 2.1
UBE2D3-201ENST00000321805 BRCA1P38398 1863 aaKnown RBP28.14■■■□□ 2.1
UBE2D3-201ENST00000321805 NFIXQ14938 502 aa28.13■■■□□ 2.09
UBE2D3-201ENST00000321805 LAMB4A4D0S4 1761 aa28.12■■■□□ 2.09
UBE2D3-201ENST00000321805 AFDNP55196 1824 aaKnown RBP28.11■■■□□ 2.09
UBE2D3-201ENST00000321805 A1BGP04217 495 aa28.11■■■□□ 2.09
UBE2D3-201ENST00000321805 USP16Q9Y5T5 823 aa28.11■■■□□ 2.09
UBE2D3-201ENST00000321805 LMOD3Q0VAK6 560 aa28.1■■■□□ 2.09
UBE2D3-201ENST00000321805 BCORQ6W2J9 1755 aa28.09■■■□□ 2.09
UBE2D3-201ENST00000321805 A0A0G2JLW4 131 aa28.09■■■□□ 2.09
UBE2D3-201ENST00000321805 DPEP1P16444 411 aa28.09■■■□□ 2.09
UBE2D3-201ENST00000321805 WDR43Q15061 677 aaKnown RBP eCLIP28.09■■■□□ 2.09
UBE2D3-201ENST00000321805 ZNF330Q9Y3S2 320 aaPredicted RBP28.08■■■□□ 2.09
UBE2D3-201ENST00000321805 PRAMEF22A3QJZ6 481 aa28.06■■■□□ 2.08
UBE2D3-201ENST00000321805 SERPINB2P05120 415 aa28.06■■■□□ 2.08
UBE2D3-201ENST00000321805 TMPOP42166 694 aaKnown RBP28.06■■■□□ 2.08
UBE2D3-201ENST00000321805 RIPK4P57078 832 aa28.06■■■□□ 2.08
UBE2D3-201ENST00000321805 TBC1D2BQ9UPU7 963 aa28.06■■■□□ 2.08
UBE2D3-201ENST00000321805 ARFGEF1Q9Y6D6 1849 aa28.06■■■□□ 2.08
UBE2D3-201ENST00000321805 RGL2O15211 777 aa28.05■■■□□ 2.08
UBE2D3-201ENST00000321805 KCNA3P22001 575 aa28.05■■■□□ 2.08
UBE2D3-201ENST00000321805 BABAM1Q9NWV8 329 aa28.05■■■□□ 2.08
UBE2D3-201ENST00000321805 PIM2Q9P1W9 311 aa28.05■■■□□ 2.08
UBE2D3-201ENST00000321805 WWC3Q9ULE0 1092 aa28.05■■■□□ 2.08
UBE2D3-201ENST00000321805 BCS1LQ9Y276 419 aa28.05■■■□□ 2.08
UBE2D3-201ENST00000321805 CARMIL3Q8ND23 1372 aa28.04■■■□□ 2.08
UBE2D3-201ENST00000321805 CAMTA2O94983 1202 aa28.04■■■□□ 2.08
UBE2D3-201ENST00000321805 DZIP3Q86Y13 1208 aaKnown RBP28.04■■■□□ 2.08
UBE2D3-201ENST00000321805 THUMPD2Q9BTF0 503 aaKnown RBP28.04■■■□□ 2.08
UBE2D3-201ENST00000321805 MIS18AQ9NYP9 233 aa28.04■■■□□ 2.08
UBE2D3-201ENST00000321805 EIF4A1P60842 406 aaKnown RBP28.03■■■□□ 2.08
UBE2D3-201ENST00000321805 RUNDC1Q96C34 613 aa28.03■■■□□ 2.08
UBE2D3-201ENST00000321805 ADCY9O60503 1353 aa28.02■■■□□ 2.08
UBE2D3-201ENST00000321805 GIGYF1O75420 1035 aaPredicted RBP28.02■■■□□ 2.08
UBE2D3-201ENST00000321805 TBC1D9BQ66K14 1250 aa28.02■■■□□ 2.08
UBE2D3-201ENST00000321805 CLEC4GQ6UXB4 293 aa28.02■■■□□ 2.08
UBE2D3-201ENST00000321805 DLEC1Q9Y238 1755 aa28.01■■■□□ 2.07
UBE2D3-201ENST00000321805 ZNF652Q9Y2D9 606 aa28■■■□□ 2.07
UBE2D3-201ENST00000321805 NBPF26B4DH59 902 aa27.99■■■□□ 2.07
UBE2D3-201ENST00000321805 DALRD3Q5D0E6 543 aaKnown RBP27.99■■■□□ 2.07
UBE2D3-201ENST00000321805 NBPF10Q6P3W6 841 aaKnown RBP27.99■■■□□ 2.07
UBE2D3-201ENST00000321805 BICDL1Q6ZP65 573 aa27.99■■■□□ 2.07
UBE2D3-201ENST00000321805 NBPF15Q8N660 670 aa27.99■■■□□ 2.07
UBE2D3-201ENST00000321805 ADAMTS8Q9UP79 889 aa27.99■■■□□ 2.07
UBE2D3-201ENST00000321805 PDZRN3Q9UPQ7 1066 aa27.99■■■□□ 2.07
UBE2D3-201ENST00000321805 SETDB2Q96T68 719 aa27.98■■■□□ 2.07
UBE2D3-201ENST00000321805 TSPYL4Q9UJ04 414 aa27.98■■■□□ 2.07
UBE2D3-201ENST00000321805 CHRNA5P30532 468 aa27.97■■■□□ 2.07
UBE2D3-201ENST00000321805 PIP4K2AP48426 406 aaPredicted RBP27.97■■■□□ 2.07
UBE2D3-201ENST00000321805 CCDC146Q8IYE0 955 aa27.97■■■□□ 2.07
UBE2D3-201ENST00000321805 ERBB4Q15303 1308 aa27.96■■■□□ 2.07
UBE2D3-201ENST00000321805 ATP10DQ9P241 1426 aa27.96■■■□□ 2.07
UBE2D3-201ENST00000321805 BRIP1Q9BX63 1249 aa27.94■■■□□ 2.06
UBE2D3-201ENST00000321805 ANKRD31Q8N7Z5 1873 aa27.93■■■□□ 2.06
UBE2D3-201ENST00000321805 PRR5LQ6MZQ0 368 aa27.93■■■□□ 2.06
UBE2D3-201ENST00000321805 RRP7AQ9Y3A4 280 aaKnown RBP27.93■■■□□ 2.06
UBE2D3-201ENST00000321805 PDE6BP35913 854 aa27.92■■■□□ 2.06
UBE2D3-201ENST00000321805 ARHGAP27Q6ZUM4 889 aa27.92■■■□□ 2.06
UBE2D3-201ENST00000321805 CNBD1Q8NA66 436 aa27.92■■■□□ 2.06
UBE2D3-201ENST00000321805 ZNF316A6NFI3 1004 aaPredicted RBP27.91■■■□□ 2.06
UBE2D3-201ENST00000321805 H0YIN7 160 aa27.91■■■□□ 2.06
UBE2D3-201ENST00000321805 TRIM35Q9UPQ4 493 aa27.91■■■□□ 2.06
UBE2D3-201ENST00000321805 ST5P78524 1137 aa27.9■■■□□ 2.06
UBE2D3-201ENST00000321805 NEUROD2Q15784 382 aa27.9■■■□□ 2.06
UBE2D3-201ENST00000321805 C2CD5Q86YS7 1000 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms