RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 RWDD1Q9H446 243 aaPredicted RBP14.13□□□□□ -0.15
LDLRAD3-201ENST00000315571 NLRP2Q9NX02 1062 aa14.13□□□□□ -0.15
LDLRAD3-201ENST00000315571 PDZRN3Q9UPQ7 1066 aa14.13□□□□□ -0.15
LDLRAD3-201ENST00000315571 FAM83GA6ND36 823 aa14.13□□□□□ -0.15
LDLRAD3-201ENST00000315571 PRKAR2BP31323 418 aa14.13□□□□□ -0.15
LDLRAD3-201ENST00000315571 NOLC1Q14978 699 aaKnown RBP eCLIP14.13□□□□□ -0.15
LDLRAD3-201ENST00000315571 STRN4Q9NRL3 753 aa14.13□□□□□ -0.15
LDLRAD3-201ENST00000315571 ERBB3P21860 1342 aa14.13□□□□□ -0.15
LDLRAD3-201ENST00000315571 SHPRHQ149N8 1683 aa14.13□□□□□ -0.15
LDLRAD3-201ENST00000315571 RBM27Q9P2N5 1060 aaKnown RBP14.12□□□□□ -0.15
LDLRAD3-201ENST00000315571 CRYBG1Q9Y4K1 1723 aa14.12□□□□□ -0.15
LDLRAD3-201ENST00000315571 COL22A1Q8NFW1 1626 aaPredicted RBP14.12□□□□□ -0.15
LDLRAD3-201ENST00000315571 NPHP1O15259 732 aa14.12□□□□□ -0.15
LDLRAD3-201ENST00000315571 ZSCAN23Q3MJ62 389 aa14.12□□□□□ -0.15
LDLRAD3-201ENST00000315571 USHBP1Q8N6Y0 703 aa14.12□□□□□ -0.15
LDLRAD3-201ENST00000315571 SPATA31A6Q5VVP1 1343 aa14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 IGSF1Q8N6C5 1336 aa14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 APAF1O14727 1248 aa14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 KLHL40Q2TBA0 621 aa14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 NGEFQ8N5V2 710 aa14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 OGFRQ9NZT2 677 aa14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 GTF2F1P35269 517 aaKnown RBP eCLIP14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 RBM25P49756 843 aaKnown RBP14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 LMOD3Q0VAK6 560 aa14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 BTG4Q9NY30 223 aa14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 NBPF6Q5VWK0 638 aa14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 NBPF4Q96M43 638 aa14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 TTC12Q9H892 705 aaPredicted RBP14.11□□□□□ -0.15
LDLRAD3-201ENST00000315571 ABCA3Q99758 1704 aa14.1□□□□□ -0.15
LDLRAD3-201ENST00000315571 MEX3CQ5U5Q3 659 aaKnown RBP14.1□□□□□ -0.15
LDLRAD3-201ENST00000315571 DRC7Q8IY82 874 aa14.1□□□□□ -0.15
LDLRAD3-201ENST00000315571 LOC102724159A0A0B4J2E5 919 aa14.1□□□□□ -0.15
LDLRAD3-201ENST00000315571 PWP2Q15269 919 aaKnown RBP14.1□□□□□ -0.15
LDLRAD3-201ENST00000315571 TOM1L2Q6ZVM7 507 aa14.1□□□□□ -0.15
LDLRAD3-201ENST00000315571 RSPH14Q9UHP6 348 aa14.1□□□□□ -0.15
LDLRAD3-201ENST00000315571 ABCC6O95255 1503 aa14.1□□□□□ -0.15
LDLRAD3-201ENST00000315571 TCP11L2Q8N4U5 519 aa14.09□□□□□ -0.15
LDLRAD3-201ENST00000315571 ZNF526Q8TF50 670 aaPredicted RBP14.09□□□□□ -0.15
LDLRAD3-201ENST00000315571 FEZ1Q99689 392 aa14.09□□□□□ -0.15
LDLRAD3-201ENST00000315571 BCL2L13Q9BXK5 485 aa14.09□□□□□ -0.15
LDLRAD3-201ENST00000315571 CIZ1Q9ULV3 898 aaPredicted RBP14.09□□□□□ -0.15
LDLRAD3-201ENST00000315571 BANK1Q8NDB2 785 aa14.09□□□□□ -0.15
LDLRAD3-201ENST00000315571 C8orf37Q96NL8 207 aa14.09□□□□□ -0.15
LDLRAD3-201ENST00000315571 RRP7AQ9Y3A4 280 aaKnown RBP14.09□□□□□ -0.15
LDLRAD3-201ENST00000315571 NGLY1Q96IV0 654 aa14.08□□□□□ -0.16
LDLRAD3-201ENST00000315571 WDR17Q8IZU2 1322 aa14.08□□□□□ -0.16
LDLRAD3-201ENST00000315571 GOLGA6L1Q8N7Z2 621 aa14.08□□□□□ -0.16
LDLRAD3-201ENST00000315571 GABPB1Q06547 395 aaPredicted RBP14.07□□□□□ -0.16
LDLRAD3-201ENST00000315571 PLEKHF1Q96S99 279 aa14.07□□□□□ -0.16
LDLRAD3-201ENST00000315571 CAMTA1Q9Y6Y1 1673 aa14.07□□□□□ -0.16
LDLRAD3-201ENST00000315571 BAG4O95429 457 aaKnown RBP14.07□□□□□ -0.16
LDLRAD3-201ENST00000315571 ZNF710Q8N1W2 664 aa14.07□□□□□ -0.16
LDLRAD3-201ENST00000315571 FBXO41Q8TF61 875 aa14.07□□□□□ -0.16
LDLRAD3-201ENST00000315571 RAPGEF4Q8WZA2 1011 aa14.06□□□□□ -0.16
LDLRAD3-201ENST00000315571 BCCIPQ9P287 314 aaKnown RBP eCLIP14.06□□□□□ -0.16
LDLRAD3-201ENST00000315571 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
LDLRAD3-201ENST00000315571 C10orf67Q8IYJ2 551 aa14.06□□□□□ -0.16
LDLRAD3-201ENST00000315571 PHACTR3Q96KR7 559 aa14.06□□□□□ -0.16
LDLRAD3-201ENST00000315571 LARP1Q6PKG0 1096 aaKnown RBP14.06□□□□□ -0.16
LDLRAD3-201ENST00000315571 SPC24Q8NBT2 197 aa14.06□□□□□ -0.16
LDLRAD3-201ENST00000315571 KDRP35968 1356 aa14.06□□□□□ -0.16
LDLRAD3-201ENST00000315571 SYAP1Q96A49 352 aaPredicted RBP14.05□□□□□ -0.16
LDLRAD3-201ENST00000315571 RIOK3O14730 519 aaKnown RBP14.05□□□□□ -0.16
LDLRAD3-201ENST00000315571 CCDC9Q9Y3X0 531 aaKnown RBP14.05□□□□□ -0.16
LDLRAD3-201ENST00000315571 COL18A1P39060 1754 aa14.05□□□□□ -0.16
LDLRAD3-201ENST00000315571 COL14A1Q05707 1796 aaKnown RBP14.05□□□□□ -0.16
LDLRAD3-201ENST00000315571 KRT222Q8N1A0 295 aa14.05□□□□□ -0.16
LDLRAD3-201ENST00000315571 IFT57Q9NWB7 429 aa14.05□□□□□ -0.16
LDLRAD3-201ENST00000315571 TMPOP42166 694 aaKnown RBP14.04□□□□□ -0.16
LDLRAD3-201ENST00000315571 RAB3GAP1Q15042 981 aa14.04□□□□□ -0.16
LDLRAD3-201ENST00000315571 NFE2L2Q16236 605 aa14.04□□□□□ -0.16
LDLRAD3-201ENST00000315571 USP25Q9UHP3 1055 aa14.04□□□□□ -0.16
LDLRAD3-201ENST00000315571 TATP17735 454 aaPredicted RBP14.04□□□□□ -0.16
LDLRAD3-201ENST00000315571 SAMD1Q6SPF0 538 aaPredicted RBP14.04□□□□□ -0.16
LDLRAD3-201ENST00000315571 TSPY26PQ9H489 355 aa14.04□□□□□ -0.16
LDLRAD3-201ENST00000315571 LMO7Q8WWI1 1683 aa14.03□□□□□ -0.16
LDLRAD3-201ENST00000315571 TEX35Q5T0J7 233 aa14.03□□□□□ -0.16
LDLRAD3-201ENST00000315571 GAS2L2Q8NHY3 880 aa14.03□□□□□ -0.16
LDLRAD3-201ENST00000315571 CARD10Q9BWT7 1032 aa14.03□□□□□ -0.16
LDLRAD3-201ENST00000315571 RGPD1P0DJD0 1748 aa14.03□□□□□ -0.16
LDLRAD3-201ENST00000315571 RGPD5Q99666 1765 aa14.03□□□□□ -0.16
LDLRAD3-201ENST00000315571 NUCB2P80303 420 aa14.02□□□□□ -0.16
LDLRAD3-201ENST00000315571 PLEKHO1Q53GL0 409 aaPredicted RBP14.02□□□□□ -0.16
LDLRAD3-201ENST00000315571 AXDND1Q5T1B0 1012 aaPredicted RBP14.02□□□□□ -0.16
LDLRAD3-201ENST00000315571 RASSF4Q9H2L5 321 aa14.02□□□□□ -0.17
LDLRAD3-201ENST00000315571 CRB1P82279 1406 aa14.02□□□□□ -0.17
LDLRAD3-201ENST00000315571 LRP6O75581 1613 aa14.02□□□□□ -0.17
LDLRAD3-201ENST00000315571 K7ELQ4 463 aaPredicted RBP14.01□□□□□ -0.17
LDLRAD3-201ENST00000315571 EP400NLQ6ZTU2 488 aa14.01□□□□□ -0.17
LDLRAD3-201ENST00000315571 CCDC112Q8NEF3 446 aa14.01□□□□□ -0.17
LDLRAD3-201ENST00000315571 MTHFSDQ2M296 383 aaKnown RBP14.01□□□□□ -0.17
LDLRAD3-201ENST00000315571 AMOTQ4VCS5 1084 aa14□□□□□ -0.17
LDLRAD3-201ENST00000315571 UNC5CLQ8IV45 518 aa14□□□□□ -0.17
LDLRAD3-201ENST00000315571 RTF1Q92541 710 aaKnown RBP14□□□□□ -0.17
LDLRAD3-201ENST00000315571 DEF6Q9H4E7 631 aa14□□□□□ -0.17
LDLRAD3-201ENST00000315571 ZNF622Q969S3 477 aaKnown RBP eCLIP14□□□□□ -0.17
LDLRAD3-201ENST00000315571 NOL10Q9BSC4 688 aaKnown RBP14□□□□□ -0.17
LDLRAD3-201ENST00000315571 USP21Q9UK80 565 aa14□□□□□ -0.17
LDLRAD3-201ENST00000315571 ZNF530Q6P9A1 599 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms