RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 CCDC30Q5VVM6 783 aa18.98■□□□□ 0.63
SLC39A1-201ENST00000310483 RUFY3Q7L099 469 aa18.98■□□□□ 0.63
SLC39A1-201ENST00000310483 ARHGEF10O15013 1369 aa18.98■□□□□ 0.63
SLC39A1-201ENST00000310483 ZSCAN22P10073 491 aaPredicted RBP18.98■□□□□ 0.63
SLC39A1-201ENST00000310483 SYT1P21579 422 aa18.98■□□□□ 0.63
SLC39A1-201ENST00000310483 PLCB2Q00722 1185 aa18.98■□□□□ 0.63
SLC39A1-201ENST00000310483 PHAXQ9H814 394 aaKnown RBP18.98■□□□□ 0.63
SLC39A1-201ENST00000310483 USP6P35125 1406 aa18.97■□□□□ 0.63
SLC39A1-201ENST00000310483 SURF6O75683 361 aaKnown RBP18.97■□□□□ 0.63
SLC39A1-201ENST00000310483 UBTFL1P0CB47 393 aaPredicted RBP18.97■□□□□ 0.63
SLC39A1-201ENST00000310483 NOLC1Q14978 699 aaKnown RBP eCLIP18.97■□□□□ 0.63
SLC39A1-201ENST00000310483 PI4K2BQ8TCG2 481 aa18.97■□□□□ 0.63
SLC39A1-201ENST00000310483 PIBF1Q8WXW3 757 aa18.97■□□□□ 0.63
SLC39A1-201ENST00000310483 TTC14Q96N46 770 aa18.97■□□□□ 0.63
SLC39A1-201ENST00000310483 SPG7Q9UQ90 795 aa18.97■□□□□ 0.63
SLC39A1-201ENST00000310483 GIMAP6Q6P9H5 292 aa18.96■□□□□ 0.63
SLC39A1-201ENST00000310483 PPP1R42Q7Z4L9 355 aa18.96■□□□□ 0.63
SLC39A1-201ENST00000310483 TMEM87AQ8NBN3 555 aa18.96■□□□□ 0.63
SLC39A1-201ENST00000310483 MYRIPQ8NFW9 859 aa18.96■□□□□ 0.63
SLC39A1-201ENST00000310483 PRDM10Q9NQV6 1147 aa18.96■□□□□ 0.63
SLC39A1-201ENST00000310483 SOS1Q07889 1333 aaPredicted RBP18.96■□□□□ 0.63
SLC39A1-201ENST00000310483 FAM208AQ9UK61 1670 aaKnown RBP18.96■□□□□ 0.63
SLC39A1-201ENST00000310483 SGSM2O43147 1006 aa18.96■□□□□ 0.63
SLC39A1-201ENST00000310483 STX6O43752 255 aa18.96■□□□□ 0.63
SLC39A1-201ENST00000310483 LSG1Q9H089 658 aaKnown RBP18.96■□□□□ 0.63
SLC39A1-201ENST00000310483 PRDM4Q9UKN5 801 aa18.96■□□□□ 0.63
SLC39A1-201ENST00000310483 RAD50Q92878 1312 aa18.96■□□□□ 0.63
SLC39A1-201ENST00000310483 AP5Z1O43299 807 aa18.95■□□□□ 0.62
SLC39A1-201ENST00000310483 UVSSAQ2YD98 709 aa18.95■□□□□ 0.62
SLC39A1-201ENST00000310483 CWC27Q6UX04 472 aaKnown RBP18.95■□□□□ 0.62
SLC39A1-201ENST00000310483 TECPR2O15040 1411 aa18.95■□□□□ 0.62
SLC39A1-201ENST00000310483 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.95■□□□□ 0.62
SLC39A1-201ENST00000310483 USP31Q70CQ4 1352 aa18.95■□□□□ 0.62
SLC39A1-201ENST00000310483 NALCNQ8IZF0 1738 aa18.95■□□□□ 0.62
SLC39A1-201ENST00000310483 FAM184AQ8NB25 1140 aa18.95■□□□□ 0.62
SLC39A1-201ENST00000310483 ZNF710Q8N1W2 664 aa18.94■□□□□ 0.62
SLC39A1-201ENST00000310483 DDX54Q8TDD1 881 aaKnown RBP18.94■□□□□ 0.62
SLC39A1-201ENST00000310483 SSH3Q8TE77 659 aa18.94■□□□□ 0.62
SLC39A1-201ENST00000310483 F13A1P00488 732 aa18.94■□□□□ 0.62
SLC39A1-201ENST00000310483 RHPN1Q8TCX5 695 aa18.94■□□□□ 0.62
SLC39A1-201ENST00000310483 SIRT1Q96EB6 747 aa18.94■□□□□ 0.62
SLC39A1-201ENST00000310483 PLEKHG3A1L390 1219 aa18.93■□□□□ 0.62
SLC39A1-201ENST00000310483 AMPHP49418 695 aa18.93■□□□□ 0.62
SLC39A1-201ENST00000310483 UBE2HP62256 183 aa18.93■□□□□ 0.62
SLC39A1-201ENST00000310483 DNM1Q05193 864 aaKnown RBP18.93■□□□□ 0.62
SLC39A1-201ENST00000310483 CCDC83Q8IWF9 413 aa18.93■□□□□ 0.62
SLC39A1-201ENST00000310483 IL17REQ8NFR9 667 aa18.93■□□□□ 0.62
SLC39A1-201ENST00000310483 SMC3Q9UQE7 1217 aa18.93■□□□□ 0.62
SLC39A1-201ENST00000310483 AOX1Q06278 1338 aa18.93■□□□□ 0.62
SLC39A1-201ENST00000310483 FMN2Q9NZ56 1722 aa18.93■□□□□ 0.62
SLC39A1-201ENST00000310483 KDM4AO75164 1064 aa18.92■□□□□ 0.62
SLC39A1-201ENST00000310483 CASTP20810 708 aaKnown RBP18.92■□□□□ 0.62
SLC39A1-201ENST00000310483 LIMCH1Q9UPQ0 1083 aa18.92■□□□□ 0.62
SLC39A1-201ENST00000310483 KDRP35968 1356 aa18.92■□□□□ 0.62
SLC39A1-201ENST00000310483 IGSF1Q8N6C5 1336 aa18.92■□□□□ 0.62
SLC39A1-201ENST00000310483 GNAT3A8MTJ3 354 aa18.91■□□□□ 0.62
SLC39A1-201ENST00000310483 SRGAP3O43295 1099 aa18.91■□□□□ 0.62
SLC39A1-201ENST00000310483 NBPF7P0C2Y1 421 aaPredicted RBP18.91■□□□□ 0.62
SLC39A1-201ENST00000310483 FUCA2Q9BTY2 467 aa18.91■□□□□ 0.62
SLC39A1-201ENST00000310483 ADCK5Q3MIX3 580 aa18.91■□□□□ 0.62
SLC39A1-201ENST00000310483 MTERF4Q7Z6M4 381 aaKnown RBP18.91■□□□□ 0.62
SLC39A1-201ENST00000310483 FLT4P35916 1363 aa18.91■□□□□ 0.62
SLC39A1-201ENST00000310483 GJB2P29033 226 aa18.9■□□□□ 0.62
SLC39A1-201ENST00000310483 TOPAZ1Q8N9V7 1692 aa18.9■□□□□ 0.62
SLC39A1-201ENST00000310483 SBNO1A3KN83 1393 aa18.9■□□□□ 0.62
SLC39A1-201ENST00000310483 PTH1RQ03431 593 aa18.9■□□□□ 0.62
SLC39A1-201ENST00000310483 POLA2Q14181 598 aa18.9■□□□□ 0.62
SLC39A1-201ENST00000310483 NUTM2GQ5VZR2 741 aa18.9■□□□□ 0.62
SLC39A1-201ENST00000310483 SPC24Q8NBT2 197 aa18.9■□□□□ 0.62
SLC39A1-201ENST00000310483 KCNF1Q9H3M0 494 aa18.9■□□□□ 0.62
SLC39A1-201ENST00000310483 EIF2S2P20042 333 aaKnown RBP18.89■□□□□ 0.61
SLC39A1-201ENST00000310483 HDGFL1Q5TGJ6 251 aa18.89■□□□□ 0.61
SLC39A1-201ENST00000310483 LTV1Q96GA3 475 aaPredicted RBP18.89■□□□□ 0.61
SLC39A1-201ENST00000310483 HYPKQ9NX55 129 aa18.89■□□□□ 0.61
SLC39A1-201ENST00000310483 PYCARDQ9ULZ3 195 aa18.89■□□□□ 0.61
SLC39A1-201ENST00000310483 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.89■□□□□ 0.61
SLC39A1-201ENST00000310483 TSPOAP1O95153 1857 aa18.89■□□□□ 0.61
SLC39A1-201ENST00000310483 FAM69CQ0P6D2 419 aa18.89■□□□□ 0.61
SLC39A1-201ENST00000310483 CNTROBQ8N137 903 aa18.89■□□□□ 0.61
SLC39A1-201ENST00000310483 CHMP3Q9Y3E7 222 aa18.89■□□□□ 0.61
SLC39A1-201ENST00000310483 ST3GAL1Q11201 340 aa18.88■□□□□ 0.61
SLC39A1-201ENST00000310483 PRIMPOLQ96LW4 560 aa18.88■□□□□ 0.61
SLC39A1-201ENST00000310483 CCDC94Q9BW85 323 aaPredicted RBP18.88■□□□□ 0.61
SLC39A1-201ENST00000310483 MTMR6Q9Y217 621 aa18.88■□□□□ 0.61
SLC39A1-201ENST00000310483 RAB11FIP3O75154 756 aa18.88■□□□□ 0.61
SLC39A1-201ENST00000310483 LETM1O95202 739 aaPredicted RBP18.88■□□□□ 0.61
SLC39A1-201ENST00000310483 COL9A3Q14050 684 aaPredicted RBP18.88■□□□□ 0.61
SLC39A1-201ENST00000310483 NECAB1Q8N987 351 aa18.88■□□□□ 0.61
SLC39A1-201ENST00000310483 SPTLC3Q9NUV7 552 aa18.88■□□□□ 0.61
SLC39A1-201ENST00000310483 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
SLC39A1-201ENST00000310483 VPS37CA5D8V6 355 aaPredicted RBP18.87■□□□□ 0.61
SLC39A1-201ENST00000310483 EPB41L2O43491 1005 aaKnown RBP18.87■□□□□ 0.61
SLC39A1-201ENST00000310483 PRPF40BQ6NWY9 871 aaKnown RBP18.87■□□□□ 0.61
SLC39A1-201ENST00000310483 USHBP1Q8N6Y0 703 aa18.87■□□□□ 0.61
SLC39A1-201ENST00000310483 KIF1BPQ96EK5 621 aa18.87■□□□□ 0.61
SLC39A1-201ENST00000310483 JAKMIP1Q96N16 626 aaKnown RBP18.87■□□□□ 0.61
SLC39A1-201ENST00000310483 LRRC37A3O60309 1634 aa18.87■□□□□ 0.61
SLC39A1-201ENST00000310483 ANXA1P04083 346 aa18.86■□□□□ 0.61
SLC39A1-201ENST00000310483 TAF7Q15545 349 aaPredicted RBP18.86■□□□□ 0.61
SLC39A1-201ENST00000310483 HMGN5P82970 282 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms