RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 GLRX3O76003 335 aaKnown RBP17.85■□□□□ 0.45
HCFC1-201ENST00000310441 HSF2BPO75031 334 aa17.84■□□□□ 0.45
HCFC1-201ENST00000310441 CCDC141Q6ZP82 1450 aa17.84■□□□□ 0.45
HCFC1-201ENST00000310441 CWC27Q6UX04 472 aaKnown RBP17.84■□□□□ 0.45
HCFC1-201ENST00000310441 IQCA1Q86XH1 822 aa17.84■□□□□ 0.45
HCFC1-201ENST00000310441 ZSCAN29Q8IWY8 852 aaPredicted RBP17.84■□□□□ 0.45
HCFC1-201ENST00000310441 DNAAF4Q8WXU2 420 aa17.84■□□□□ 0.45
HCFC1-201ENST00000310441 C8orf76Q96K31 380 aa17.84■□□□□ 0.45
HCFC1-201ENST00000310441 BCCIPQ9P287 314 aaKnown RBP eCLIP17.84■□□□□ 0.45
HCFC1-201ENST00000310441 BAG4O95429 457 aaKnown RBP17.84■□□□□ 0.45
HCFC1-201ENST00000310441 DDX19AQ9NUU7 478 aaKnown RBP17.84■□□□□ 0.45
HCFC1-201ENST00000310441 IQCGQ9H095 443 aaKnown RBP17.84■□□□□ 0.45
HCFC1-201ENST00000310441 SCLT1Q96NL6 688 aa17.83■□□□□ 0.45
HCFC1-201ENST00000310441 FAM135AQ9P2D6 1515 aa17.83■□□□□ 0.45
HCFC1-201ENST00000310441 KIF5BP33176 963 aa17.83■□□□□ 0.45
HCFC1-201ENST00000310441 KIF1BPQ96EK5 621 aa17.83■□□□□ 0.45
HCFC1-201ENST00000310441 CALML4Q96GE6 196 aa17.83■□□□□ 0.45
HCFC1-201ENST00000310441 PRIMPOLQ96LW4 560 aa17.83■□□□□ 0.45
HCFC1-201ENST00000310441 CAVIN4Q5BKX8 364 aa17.83■□□□□ 0.44
HCFC1-201ENST00000310441 CTAGE1Q96RT6 745 aa17.83■□□□□ 0.44
HCFC1-201ENST00000310441 CASKIN1Q8WXD9 1431 aa17.83■□□□□ 0.44
HCFC1-201ENST00000310441 RPAP2Q8IXW5 612 aaPredicted RBP17.83■□□□□ 0.44
HCFC1-201ENST00000310441 TBC1D5Q92609 795 aa17.83■□□□□ 0.44
HCFC1-201ENST00000310441 NKTRP30414 1462 aaKnown RBP17.83■□□□□ 0.44
HCFC1-201ENST00000310441 STARD3NLO95772 234 aa17.82■□□□□ 0.44
HCFC1-201ENST00000310441 RBM42Q9BTD8 480 aaKnown RBP17.82■□□□□ 0.44
HCFC1-201ENST00000310441 MACROD2A1Z1Q3 448 aa17.82■□□□□ 0.44
HCFC1-201ENST00000310441 ANKRD30BQ9BXX2 1392 aa17.82■□□□□ 0.44
HCFC1-201ENST00000310441 ATAD2Q6PL18 1390 aa17.82■□□□□ 0.44
HCFC1-201ENST00000310441 CCDC171Q6TFL3 1326 aa17.82■□□□□ 0.44
HCFC1-201ENST00000310441 A0A1W2PRG0 241 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 NOL3O60936 208 aaKnown RBP17.81■□□□□ 0.44
HCFC1-201ENST00000310441 FMNL3Q8IVF7 1028 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 TCP11L1Q9NUJ3 509 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 TIGD1Q96MW7 591 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 SIL1Q9H173 461 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 PPP2R1AP30153 589 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 USP5P45974 858 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 TMEM87AQ8NBN3 555 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 SELENOOQ9BVL4 669 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 PPP4R3BQ5MIZ7 849 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 RMND1Q9NWS8 449 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 BTBD11A6QL63 1104 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 URI1O94763 535 aaPredicted RBP17.81■□□□□ 0.44
HCFC1-201ENST00000310441 KIAA0753Q2KHM9 967 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 CATIPQ7Z7H3 387 aa17.81■□□□□ 0.44
HCFC1-201ENST00000310441 KIF4AO95239 1232 aa17.8■□□□□ 0.44
HCFC1-201ENST00000310441 NCOA2Q15596 1464 aa17.8■□□□□ 0.44
HCFC1-201ENST00000310441 FBF1Q8TES7 1133 aa17.8■□□□□ 0.44
HCFC1-201ENST00000310441 NAPBQ9H115 298 aa17.8■□□□□ 0.44
HCFC1-201ENST00000310441 CABP2Q9NPB3 220 aa17.8■□□□□ 0.44
HCFC1-201ENST00000310441 ATP2A1O14983 1001 aa17.8■□□□□ 0.44
HCFC1-201ENST00000310441 PPM1FP49593 454 aaPredicted RBP17.8■□□□□ 0.44
HCFC1-201ENST00000310441 TDRD12Q587J7 1177 aaKnown RBP17.8■□□□□ 0.44
HCFC1-201ENST00000310441 GGNBP2Q9H3C7 697 aa17.8■□□□□ 0.44
HCFC1-201ENST00000310441 ANAPC4Q9UJX5 808 aa17.8■□□□□ 0.44
HCFC1-201ENST00000310441 SLC12A7Q9Y666 1083 aa17.8■□□□□ 0.44
HCFC1-201ENST00000310441 PRKCSHP14314 528 aaPredicted RBP17.8■□□□□ 0.44
HCFC1-201ENST00000310441 CNNM3Q8NE01 707 aa17.8■□□□□ 0.44
HCFC1-201ENST00000310441 SLU7O95391 586 aaKnown RBP17.79■□□□□ 0.44
HCFC1-201ENST00000310441 JAKMIP2Q96AA8 810 aa17.79■□□□□ 0.44
HCFC1-201ENST00000310441 GTPBP4Q9BZE4 634 aaKnown RBP17.79■□□□□ 0.44
HCFC1-201ENST00000310441 MNAT1P51948 309 aa17.79■□□□□ 0.44
HCFC1-201ENST00000310441 STRN4Q9NRL3 753 aa17.79■□□□□ 0.44
HCFC1-201ENST00000310441 ERBINQ96RT1 1412 aa17.79■□□□□ 0.44
HCFC1-201ENST00000310441 C1orf115Q9H7X2 142 aa17.79■□□□□ 0.44
HCFC1-201ENST00000310441 EXOSC9Q06265 439 aaKnown RBP17.79■□□□□ 0.44
HCFC1-201ENST00000310441 MKRN1Q9UHC7 482 aaKnown RBP17.79■□□□□ 0.44
HCFC1-201ENST00000310441 MKNK2Q9HBH9 465 aa17.79■□□□□ 0.44
HCFC1-201ENST00000310441 SSRP1Q08945 709 aaKnown RBP17.78■□□□□ 0.44
HCFC1-201ENST00000310441 MSL1Q68DK7 614 aa17.78■□□□□ 0.44
HCFC1-201ENST00000310441 MAATS1Q7Z4T9 603 aa17.78■□□□□ 0.44
HCFC1-201ENST00000310441 SMC6Q96SB8 1091 aa17.78■□□□□ 0.44
HCFC1-201ENST00000310441 CCDC194A0A1B0GVG4 234 aa17.78■□□□□ 0.44
HCFC1-201ENST00000310441 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
HCFC1-201ENST00000310441 TNNT1P13805 278 aa17.78■□□□□ 0.44
HCFC1-201ENST00000310441 MAP3K12Q12852 859 aa17.78■□□□□ 0.44
HCFC1-201ENST00000310441 SNW1Q13573 536 aaKnown RBP17.78■□□□□ 0.44
HCFC1-201ENST00000310441 KLHL10Q6JEL2 608 aa17.78■□□□□ 0.44
HCFC1-201ENST00000310441 DZIP1Q86YF9 867 aaKnown RBP17.78■□□□□ 0.44
HCFC1-201ENST00000310441 BMP15O95972 392 aa17.78■□□□□ 0.44
HCFC1-201ENST00000310441 CCDC14Q49A88 953 aa17.78■□□□□ 0.44
HCFC1-201ENST00000310441 KIAA1524Q8TCG1 905 aa17.78■□□□□ 0.44
HCFC1-201ENST00000310441 NAP1L3Q99457 506 aaPredicted RBP17.78■□□□□ 0.44
HCFC1-201ENST00000310441 JADE2Q9NQC1 790 aa17.78■□□□□ 0.44
HCFC1-201ENST00000310441 EPRSP07814 1512 aaKnown RBP17.78■□□□□ 0.44
HCFC1-201ENST00000310441 ABCC11Q96J66 1382 aa17.77■□□□□ 0.44
HCFC1-201ENST00000310441 CCDC77Q9BR77 488 aa17.77■□□□□ 0.44
HCFC1-201ENST00000310441 CEP128Q6ZU80 1094 aa17.77■□□□□ 0.44
HCFC1-201ENST00000310441 WDR66Q8TBY9 1149 aa17.77■□□□□ 0.44
HCFC1-201ENST00000310441 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.77■□□□□ 0.442e-6■■□□□ 14.5
HCFC1-201ENST00000310441 LMAN1P49257 510 aa17.77■□□□□ 0.44
HCFC1-201ENST00000310441 ARFGAP3Q9NP61 516 aa17.77■□□□□ 0.44
HCFC1-201ENST00000310441 SRRTQ9BXP5 876 aaKnown RBP17.77■□□□□ 0.43
HCFC1-201ENST00000310441 AKNAQ7Z591 1439 aa17.77■□□□□ 0.43
HCFC1-201ENST00000310441 RPGRIP1LQ68CZ1 1315 aa17.77■□□□□ 0.43
HCFC1-201ENST00000310441 CEP135Q66GS9 1140 aa17.77■□□□□ 0.43
HCFC1-201ENST00000310441 TUBBP07437 444 aa17.77■□□□□ 0.43
HCFC1-201ENST00000310441 TTF1Q15361 905 aaPredicted RBP17.77■□□□□ 0.43
HCFC1-201ENST00000310441 ZNF530Q6P9A1 599 aaPredicted RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms