RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 NOM1Q5C9Z4 860 aaKnown RBP3.73□□□□□ -1.81
CLOCK-201ENST00000309964 CEP57L1Q8IYX8 460 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 BCL11BQ9C0K0 894 aaPredicted RBP3.73□□□□□ -1.81
CLOCK-201ENST00000309964 COG6Q9Y2V7 657 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 ATP10AO60312 1499 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 MAPKBP1O60336 1514 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 GNAT2P19087 354 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 METTL24Q5JXM2 366 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 ZFYVE9O95405 1425 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 NAP1L1P55209 391 aaKnown RBP3.73□□□□□ -1.81
CLOCK-201ENST00000309964 DDB1Q16531 1140 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 KRT28Q7Z3Y7 464 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 BEGAINQ9BUH8 593 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 SHROOM2Q13796 1616 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 MAST3O60307 1309 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 UBAP1LF5GYI3 381 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 LMOD1P29536 600 aaPredicted RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 CNNM2Q9H8M5 875 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 CTAGE5O15320 804 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 GBP2P32456 591 aaPredicted RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 BMS1Q14692 1282 aaKnown RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 SEPT7Q16181 437 aaKnown RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 HMG20BQ9P0W2 317 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 CDK13Q14004 1512 aaKnown RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 YEATS2Q9ULM3 1422 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 ARHGEF12Q9NZN5 1544 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 VPS37CA5D8V6 355 aaPredicted RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 CCDC192P0DO97 292 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 CCDC39Q9UFE4 941 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 TUBB4BP68371 445 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 FKBP4Q02790 459 aaKnown RBP eCLIP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 PPP2R1AP30153 589 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 CATIPQ7Z7H3 387 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 SUPT20HQ8NEM7 779 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 CIZ1Q9ULV3 898 aaPredicted RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 RTCBQ9Y3I0 505 aaKnown RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 KIF2AO00139 706 aaPredicted RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 SSFA2P28290 1259 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 GIGYF2Q6Y7W6 1299 aaKnown RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 PIBF1Q8WXW3 757 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 MAP7D2Q96T17 732 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 ZC3H12CQ9C0D7 883 aaKnown RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 SLC12A5Q9H2X9 1139 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 CWC25Q9NXE8 425 aaPredicted RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 NAIPQ13075 1403 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 NSD3Q9BZ95 1437 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 NEBLO76041 1014 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 ATP2B2Q01814 1243 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 MCTP2Q6DN12 878 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 SH2B1Q9NRF2 756 aaPredicted RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 ABCF2Q9UG63 623 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 KDM5AP29375 1690 aaKnown RBP3.72□□□□□ -1.81
CLOCK-201ENST00000309964 PIK3C2GO75747 1445 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 JAKMIP3Q5VZ66 844 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 TAOK3Q9H2K8 898 aa3.72□□□□□ -1.81
CLOCK-201ENST00000309964 ANKRD62A6NC57 917 aa3.71□□□□□ -1.81
CLOCK-201ENST00000309964 ZNF213O14771 459 aa3.71□□□□□ -1.81
CLOCK-201ENST00000309964 DKC1O60832 514 aaKnown RBP eCLIP3.71□□□□□ -1.81
CLOCK-201ENST00000309964 BCL2L13Q9BXK5 485 aa3.71□□□□□ -1.81
CLOCK-201ENST00000309964 TCP11L1Q9NUJ3 509 aa3.71□□□□□ -1.81
CLOCK-201ENST00000309964 PIK3R4Q99570 1358 aa3.71□□□□□ -1.81
CLOCK-201ENST00000309964 SCAND2PQ9GZW5 306 aaPredicted RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 C14orf93Q9H972 538 aaKnown RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 TBX22Q9Y458 520 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 HMGB3O15347 200 aaKnown RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 MYL6BP14649 208 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 IDI1Q13907 227 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC191Q8NCU4 936 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 TTC12Q9H892 705 aaPredicted RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 DNMT1P26358 1616 aaKnown RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 CACNA1FO60840 1977 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 FOXO3O43524 673 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 ALDH1B1P30837 517 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 PPP1R2P41236 205 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 STK38Q15208 465 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 TSG101Q99816 390 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 ANKRD2Q9GZV1 360 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 RAI14Q9P0K7 980 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 GPATCH8Q9UKJ3 1502 aaKnown RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 POLR3DP05423 398 aaPredicted RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 ZCRB1Q8TBF4 217 aaKnown RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 ABCC5O15440 1437 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC171Q6TFL3 1326 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 ASXL1Q8IXJ9 1541 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 ZNF608Q9ULD9 1512 aaPredicted RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 TTLL12Q14166 644 aaPredicted RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 PARP10Q53GL7 1025 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 LRSAM1Q6UWE0 723 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC148Q8NFR7 591 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 UTP14AQ9BVJ6 771 aaKnown RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 CRNKL1Q9BZJ0 848 aaKnown RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 TRMT112Q9UI30 125 aaKnown RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 GCC2Q8IWJ2 1684 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 FYB1O15117 783 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 GRIPAP1Q4V328 841 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 MPRIPQ6WCQ1 1025 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 PPFIBP1Q86W92 1011 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 RTEL1Q9NZ71 1219 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 LMTK3Q96Q04 1460 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 PPP2R5BQ15173 497 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms