RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 SIRT2Q8IXJ6 389 aa12.84□□□□□ -0.35
KDM2A-201ENST00000308783 AKAP4Q5JQC9 854 aa12.83□□□□□ -0.36
KDM2A-201ENST00000308783 EIF2S2P20042 333 aaKnown RBP12.83□□□□□ -0.36
KDM2A-201ENST00000308783 UTP14CQ5TAP6 766 aaKnown RBP12.83□□□□□ -0.36
KDM2A-201ENST00000308783 EP400NLQ6ZTU2 488 aa12.83□□□□□ -0.36
KDM2A-201ENST00000308783 API5Q9BZZ5 524 aaKnown RBP12.83□□□□□ -0.36
KDM2A-201ENST00000308783 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.83□□□□□ -0.36
KDM2A-201ENST00000308783 PRAMEF22A3QJZ6 481 aa12.82□□□□□ -0.36
KDM2A-201ENST00000308783 ANXA1P04083 346 aa12.82□□□□□ -0.36
KDM2A-201ENST00000308783 C1orf141Q5JVX7 400 aa12.82□□□□□ -0.36
KDM2A-201ENST00000308783 SOS2Q07890 1332 aaPredicted RBP12.82□□□□□ -0.36
KDM2A-201ENST00000308783 UQCRHLA0A096LP55 91 aa12.82□□□□□ -0.36
KDM2A-201ENST00000308783 UQCRHP07919 91 aa12.82□□□□□ -0.36
KDM2A-201ENST00000308783 MSNP26038 577 aaKnown RBP12.82□□□□□ -0.36
KDM2A-201ENST00000308783 TNNT3P45378 269 aaPredicted RBP12.82□□□□□ -0.36
KDM2A-201ENST00000308783 TEFQ10587 303 aa12.82□□□□□ -0.36
KDM2A-201ENST00000308783 BTBD11A6QL63 1104 aa12.82□□□□□ -0.36
KDM2A-201ENST00000308783 RNMTO43148 476 aaKnown RBP12.82□□□□□ -0.36
KDM2A-201ENST00000308783 HDAC1Q13547 482 aaPredicted RBP12.81□□□□□ -0.36
KDM2A-201ENST00000308783 PHAXQ9H814 394 aaKnown RBP12.81□□□□□ -0.36
KDM2A-201ENST00000308783 NCAPD2Q15021 1401 aa12.81□□□□□ -0.36
KDM2A-201ENST00000308783 COL18A1P39060 1754 aa12.81□□□□□ -0.36
KDM2A-201ENST00000308783 MEGF6O75095 1541 aa12.81□□□□□ -0.36
KDM2A-201ENST00000308783 KIF20AO95235 890 aa12.81□□□□□ -0.36
KDM2A-201ENST00000308783 AMOTQ4VCS5 1084 aa12.81□□□□□ -0.36
KDM2A-201ENST00000308783 RAPGEF4Q8WZA2 1011 aa12.81□□□□□ -0.36
KDM2A-201ENST00000308783 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
KDM2A-201ENST00000308783 EIF4A1P60842 406 aaKnown RBP12.81□□□□□ -0.36
KDM2A-201ENST00000308783 MPNDQ8N594 471 aa12.81□□□□□ -0.36
KDM2A-201ENST00000308783 TRERF1Q96PN7 1200 aa12.81□□□□□ -0.36
KDM2A-201ENST00000308783 MEIS3Q99687 375 aa12.81□□□□□ -0.36
KDM2A-201ENST00000308783 ERBB4Q15303 1308 aa12.8□□□□□ -0.36
KDM2A-201ENST00000308783 SEC24BO95487 1268 aa12.8□□□□□ -0.36
KDM2A-201ENST00000308783 SLC39A6Q13433 755 aa12.8□□□□□ -0.36
KDM2A-201ENST00000308783 FAM161AQ3B820 660 aa12.8□□□□□ -0.36
KDM2A-201ENST00000308783 ZSCAN20P17040 1043 aaPredicted RBP12.79□□□□□ -0.36
KDM2A-201ENST00000308783 FLIIQ13045 1269 aa12.79□□□□□ -0.36
KDM2A-201ENST00000308783 FKBP5Q13451 457 aaPredicted RBP12.79□□□□□ -0.36
KDM2A-201ENST00000308783 HDGFL1Q5TGJ6 251 aa12.79□□□□□ -0.36
KDM2A-201ENST00000308783 INTS3Q68E01 1043 aaKnown RBP12.79□□□□□ -0.36
KDM2A-201ENST00000308783 STK31Q9BXU1 1019 aa12.79□□□□□ -0.36
KDM2A-201ENST00000308783 LNPKQ9C0E8 428 aa12.79□□□□□ -0.36
KDM2A-201ENST00000308783 CRYBG1Q9Y4K1 1723 aa12.79□□□□□ -0.36
KDM2A-201ENST00000308783 TRIM6-TRIM34B2RNG4 842 aa12.79□□□□□ -0.36
KDM2A-201ENST00000308783 TRIM34Q9BYJ4 488 aa12.79□□□□□ -0.36
KDM2A-201ENST00000308783 LETM1O95202 739 aaPredicted RBP12.78□□□□□ -0.36
KDM2A-201ENST00000308783 CCDC30Q5VVM6 783 aa12.78□□□□□ -0.36
KDM2A-201ENST00000308783 STRN4Q9NRL3 753 aa12.78□□□□□ -0.36
KDM2A-201ENST00000308783 SMC5Q8IY18 1101 aa12.78□□□□□ -0.36
KDM2A-201ENST00000308783 PLCD4Q9BRC7 762 aa12.78□□□□□ -0.36
KDM2A-201ENST00000308783 CHPF2Q9P2E5 772 aa12.78□□□□□ -0.36
KDM2A-201ENST00000308783 PTPRCP08575 1304 aa12.78□□□□□ -0.36
KDM2A-201ENST00000308783 CYP27B1O15528 508 aa12.77□□□□□ -0.36
KDM2A-201ENST00000308783 NFATC2IPQ8NCF5 419 aa12.77□□□□□ -0.36
KDM2A-201ENST00000308783 CAMTA1Q9Y6Y1 1673 aa12.77□□□□□ -0.36
KDM2A-201ENST00000308783 LMO7Q8WWI1 1683 aa12.77□□□□□ -0.36
KDM2A-201ENST00000308783 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
KDM2A-201ENST00000308783 TATP17735 454 aaPredicted RBP12.77□□□□□ -0.37
KDM2A-201ENST00000308783 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.37
KDM2A-201ENST00000308783 TOM1L2Q6ZVM7 507 aa12.77□□□□□ -0.37
KDM2A-201ENST00000308783 PHKG2P15735 406 aa12.76□□□□□ -0.37
KDM2A-201ENST00000308783 ANKRD45Q5TZF3 282 aa12.76□□□□□ -0.37
KDM2A-201ENST00000308783 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.76□□□□□ -0.37
KDM2A-201ENST00000308783 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
KDM2A-201ENST00000308783 PROSER3Q2NL68 480 aa12.76□□□□□ -0.37
KDM2A-201ENST00000308783 CPDO75976 1380 aa12.76□□□□□ -0.37
KDM2A-201ENST00000308783 KDM6AO15550 1401 aaPredicted RBP12.76□□□□□ -0.37
KDM2A-201ENST00000308783 LARP1Q6PKG0 1096 aaKnown RBP12.75□□□□□ -0.37
KDM2A-201ENST00000308783 APBB1O00213 710 aa12.75□□□□□ -0.37
KDM2A-201ENST00000308783 TNNT1P13805 278 aa12.75□□□□□ -0.37
KDM2A-201ENST00000308783 IRX5P78411 483 aaPredicted RBP12.75□□□□□ -0.37
KDM2A-201ENST00000308783 MTERF4Q7Z6M4 381 aaKnown RBP12.75□□□□□ -0.37
KDM2A-201ENST00000308783 TAF3Q5VWG9 929 aa12.75□□□□□ -0.37
KDM2A-201ENST00000308783 ZNF622Q969S3 477 aaKnown RBP eCLIP12.75□□□□□ -0.372e-6■□□□□ 8.5
KDM2A-201ENST00000308783 DNAJC2Q99543 621 aaKnown RBP12.74□□□□□ -0.37
KDM2A-201ENST00000308783 GTPBP4Q9BZE4 634 aaKnown RBP12.74□□□□□ -0.37
KDM2A-201ENST00000308783 BABAM1Q9NWV8 329 aa12.74□□□□□ -0.37
KDM2A-201ENST00000308783 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
KDM2A-201ENST00000308783 NUCB1Q02818 461 aa12.74□□□□□ -0.37
KDM2A-201ENST00000308783 PIP4K2AP48426 406 aaPredicted RBP12.74□□□□□ -0.37
KDM2A-201ENST00000308783 GIGYF1O75420 1035 aaPredicted RBP12.73□□□□□ -0.37
KDM2A-201ENST00000308783 CHD1LQ86WJ1 897 aa12.73□□□□□ -0.37
KDM2A-201ENST00000308783 SPG7Q9UQ90 795 aa12.73□□□□□ -0.37
KDM2A-201ENST00000308783 KDM3BQ7LBC6 1761 aa12.73□□□□□ -0.37
KDM2A-201ENST00000308783 ATP10DQ9P241 1426 aa12.73□□□□□ -0.37
KDM2A-201ENST00000308783 WDR17Q8IZU2 1322 aa12.73□□□□□ -0.37
KDM2A-201ENST00000308783 CEP85Q6P2H3 762 aa12.73□□□□□ -0.37
KDM2A-201ENST00000308783 CCDC94Q9BW85 323 aaPredicted RBP12.73□□□□□ -0.37
KDM2A-201ENST00000308783 IFNL2Q8IZJ0 200 aa12.73□□□□□ -0.37
KDM2A-201ENST00000308783 SLC52A2Q9HAB3 445 aa12.72□□□□□ -0.37
KDM2A-201ENST00000308783 LOC102724159A0A0B4J2E5 919 aa12.72□□□□□ -0.37
KDM2A-201ENST00000308783 PWP2Q15269 919 aaKnown RBP12.72□□□□□ -0.37
KDM2A-201ENST00000308783 C16orf71Q8IYS4 520 aaPredicted RBP12.72□□□□□ -0.37
KDM2A-201ENST00000308783 COL5A2P05997 1499 aaPredicted RBP12.72□□□□□ -0.37
KDM2A-201ENST00000308783 EVA1CP58658 441 aa12.72□□□□□ -0.37
KDM2A-201ENST00000308783 ZNF790Q6PG37 636 aa12.72□□□□□ -0.37
KDM2A-201ENST00000308783 DDX54Q8TDD1 881 aaKnown RBP12.72□□□□□ -0.37
KDM2A-201ENST00000308783 PI4KAP2A4QPH2 592 aa12.71□□□□□ -0.37
KDM2A-201ENST00000308783 PI4KAP1Q8N8J0 262 aa12.71□□□□□ -0.37
KDM2A-201ENST00000308783 BANK1Q8NDB2 785 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms