RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 AK7Q96M32 723 aa21.37■■□□□ 1.01
ATP2A2-201ENST00000308664 SCAND2PQ9GZW5 306 aaPredicted RBP21.37■■□□□ 1.01
ATP2A2-201ENST00000308664 TTC21BQ7Z4L5 1316 aa21.37■■□□□ 1.01
ATP2A2-201ENST00000308664 H0YHG0 523 aa21.36■■□□□ 1.01
ATP2A2-201ENST00000308664 NAP1L1P55209 391 aaKnown RBP21.36■■□□□ 1.01
ATP2A2-201ENST00000308664 PI4KAP2A4QPH2 592 aa21.36■■□□□ 1.01
ATP2A2-201ENST00000308664 SLC39A6Q13433 755 aa21.36■■□□□ 1.01
ATP2A2-201ENST00000308664 SART3Q15020 963 aaKnown RBP21.36■■□□□ 1.01
ATP2A2-201ENST00000308664 PI4KAP1Q8N8J0 262 aa21.36■■□□□ 1.01
ATP2A2-201ENST00000308664 CAGE1Q8TC20 777 aa21.36■■□□□ 1.01
ATP2A2-201ENST00000308664 IGSF3O75054 1194 aa21.36■■□□□ 1.01
ATP2A2-201ENST00000308664 LARP1Q6PKG0 1096 aaKnown RBP21.36■■□□□ 1.01
ATP2A2-201ENST00000308664 KIF1BPQ96EK5 621 aa21.36■■□□□ 1.01
ATP2A2-201ENST00000308664 DNAAF4Q8WXU2 420 aa21.35■■□□□ 1.01
ATP2A2-201ENST00000308664 A0A087WZG4 1122 aa21.35■■□□□ 1.01
ATP2A2-201ENST00000308664 LRRC59Q96AG4 307 aaKnown RBP21.35■■□□□ 1.01
ATP2A2-201ENST00000308664 CARD14Q9BXL6 1004 aa21.35■■□□□ 1.01
ATP2A2-201ENST00000308664 SFPQP23246 707 aaKnown RBP eCLIP21.35■■□□□ 1.017e-8■■■□□ 16
ATP2A2-201ENST00000308664 SF3B2Q13435 895 aaKnown RBP21.35■■□□□ 1.01
ATP2A2-201ENST00000308664 KCNA6P17658 529 aa21.34■■□□□ 1.01
ATP2A2-201ENST00000308664 METTL24Q5JXM2 366 aa21.34■■□□□ 1.01
ATP2A2-201ENST00000308664 AXDND1Q5T1B0 1012 aaPredicted RBP21.34■■□□□ 1.01
ATP2A2-201ENST00000308664 EXOC5O00471 708 aa21.34■■□□□ 1.01
ATP2A2-201ENST00000308664 GLRX3O76003 335 aaKnown RBP21.34■■□□□ 1.01
ATP2A2-201ENST00000308664 GNL3LQ9NVN8 582 aaKnown RBP21.34■■□□□ 1.01
ATP2A2-201ENST00000308664 TMCO3Q6UWJ1 677 aa21.34■■□□□ 1.01
ATP2A2-201ENST00000308664 UBE2HP62256 183 aa21.33■■□□□ 1.01
ATP2A2-201ENST00000308664 DBF4Q9UBU7 674 aaPredicted RBP21.33■■□□□ 1.01
ATP2A2-201ENST00000308664 ZNF165P49910 485 aa21.33■■□□□ 1.01
ATP2A2-201ENST00000308664 LRP2BPQ9P2M1 347 aa21.33■■□□□ 1.01
ATP2A2-201ENST00000308664 UHRF1BP1LA0JNW5 1464 aa21.33■■□□□ 1.01
ATP2A2-201ENST00000308664 ERCC4Q92889 916 aaPredicted RBP21.33■■□□□ 1
ATP2A2-201ENST00000308664 RAI14Q9P0K7 980 aa21.33■■□□□ 1
ATP2A2-201ENST00000308664 POLKQ9UBT6 870 aa21.33■■□□□ 1
ATP2A2-201ENST00000308664 KRT24Q2M2I5 525 aa21.33■■□□□ 1
ATP2A2-201ENST00000308664 CFAP100Q494V2 611 aa21.33■■□□□ 1
ATP2A2-201ENST00000308664 USP48Q86UV5 1035 aa21.33■■□□□ 1
ATP2A2-201ENST00000308664 WDR7Q9Y4E6 1490 aa21.32■■□□□ 1
ATP2A2-201ENST00000308664 UVSSAQ2YD98 709 aa21.32■■□□□ 1
ATP2A2-201ENST00000308664 JMYQ8N9B5 988 aa21.32■■□□□ 1
ATP2A2-201ENST00000308664 NUP133Q8WUM0 1156 aa21.32■■□□□ 1
ATP2A2-201ENST00000308664 MEIS3Q99687 375 aa21.32■■□□□ 1
ATP2A2-201ENST00000308664 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.32■■□□□ 12e-7■■□□□ 12.8
ATP2A2-201ENST00000308664 RBSNQ9H1K0 784 aa21.32■■□□□ 1
ATP2A2-201ENST00000308664 ZBTB40Q9NUA8 1239 aa21.32■■□□□ 1
ATP2A2-201ENST00000308664 PRAG1Q86YV5 1406 aa21.32■■□□□ 1
ATP2A2-201ENST00000308664 URI1O94763 535 aaPredicted RBP21.32■■□□□ 1
ATP2A2-201ENST00000308664 GJB2P29033 226 aa21.32■■□□□ 1
ATP2A2-201ENST00000308664 PIBF1Q8WXW3 757 aa21.32■■□□□ 1
ATP2A2-201ENST00000308664 POLR3GO15318 223 aaPredicted RBP21.31■■□□□ 1
ATP2A2-201ENST00000308664 CCDC47Q96A33 483 aaKnown RBP21.31■■□□□ 1
ATP2A2-201ENST00000308664 CNPY2Q9Y2B0 182 aa21.31■■□□□ 1
ATP2A2-201ENST00000308664 FILIP1LQ4L180 1135 aa21.31■■□□□ 1
ATP2A2-201ENST00000308664 TRMT112Q9UI30 125 aaKnown RBP21.31■■□□□ 1
ATP2A2-201ENST00000308664 RBM5P52756 815 aaKnown RBP eCLIP21.31■■□□□ 1
ATP2A2-201ENST00000308664 UBE3BQ7Z3V4 1068 aa21.31■■□□□ 1
ATP2A2-201ENST00000308664 SH2B1Q9NRF2 756 aaPredicted RBP21.31■■□□□ 1
ATP2A2-201ENST00000308664 GUCY1B3Q02153 619 aa21.3■■□□□ 1
ATP2A2-201ENST00000308664 TAF3Q5VWG9 929 aa21.3■■□□□ 1
ATP2A2-201ENST00000308664 CEP89Q96ST8 783 aa21.3■■□□□ 1
ATP2A2-201ENST00000308664 HS1BP3Q53T59 392 aa21.29■■□□□ 1
ATP2A2-201ENST00000308664 IFNL2Q8IZJ0 200 aa21.29■■□□□ 1
ATP2A2-201ENST00000308664 CCDC186Q7Z3E2 898 aa21.29■■□□□ 1
ATP2A2-201ENST00000308664 ASXL1Q8IXJ9 1541 aa21.29■■□□□ 1
ATP2A2-201ENST00000308664 MAP3K2Q9Y2U5 619 aa21.29■■□□□ 1
ATP2A2-201ENST00000308664 PPFIBP1Q86W92 1011 aa21.28■■□□□ 1
ATP2A2-201ENST00000308664 IL16Q14005 1332 aa21.28■■□□□ 1
ATP2A2-201ENST00000308664 TDO2P48775 406 aa21.28■■□□□ 1
ATP2A2-201ENST00000308664 IGHMBP2P38935 993 aaKnown RBP21.28■■□□□ 1
ATP2A2-201ENST00000308664 EIF4A2Q14240 407 aaKnown RBP21.28■■□□□ 1
ATP2A2-201ENST00000308664 KRT32Q14532 448 aa21.28■■□□□ 1
ATP2A2-201ENST00000308664 C8orf58Q8NAV2 365 aa21.28■■□□□ 1
ATP2A2-201ENST00000308664 PHACTR3Q96KR7 559 aa21.28■■□□□ 1
ATP2A2-201ENST00000308664 SNRKQ9NRH2 765 aa21.28■■□□□ 1
ATP2A2-201ENST00000308664 KIF2AO00139 706 aaPredicted RBP21.27■■□□□ 1
ATP2A2-201ENST00000308664 PDIA4P13667 645 aaKnown RBP21.27■■□□□ 1
ATP2A2-201ENST00000308664 ANO10Q9NW15 660 aa21.27■■□□□ 1
ATP2A2-201ENST00000308664 ZNF518AQ6AHZ1 1483 aa21.27■■□□□ 1
ATP2A2-201ENST00000308664 SMARCE1Q969G3 411 aa21.27■■□□□ 1
ATP2A2-201ENST00000308664 PDE1AP54750 535 aa21.27■■□□□ 1
ATP2A2-201ENST00000308664 NACAP1Q9BZK3 213 aa21.27■■□□□ 1
ATP2A2-201ENST00000308664 ZNF219Q9P2Y4 722 aaPredicted RBP21.27■■□□□ 1
ATP2A2-201ENST00000308664 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.27■■□□□ 13e-6■□□□□ 10
ATP2A2-201ENST00000308664 DHX8Q14562 1220 aaKnown RBP21.27■□□□□ 0.99
ATP2A2-201ENST00000308664 CCDC43Q96MW1 224 aaKnown RBP21.27■□□□□ 0.99
ATP2A2-201ENST00000308664 RIMS2Q9UQ26 1411 aa21.27■□□□□ 0.99
ATP2A2-201ENST00000308664 PPFIA3O75145 1194 aa21.26■□□□□ 0.99
ATP2A2-201ENST00000308664 ZSCAN22P10073 491 aaPredicted RBP21.26■□□□□ 0.99
ATP2A2-201ENST00000308664 XBP1P17861 261 aa21.26■□□□□ 0.99
ATP2A2-201ENST00000308664 ZSCAN29Q8IWY8 852 aaPredicted RBP21.26■□□□□ 0.99
ATP2A2-201ENST00000308664 ARHGAP45Q92619 1136 aa21.26■□□□□ 0.99
ATP2A2-201ENST00000308664 CCDC102AQ96A19 550 aa21.26■□□□□ 0.99
ATP2A2-201ENST00000308664 GTF2F1P35269 517 aaKnown RBP eCLIP21.26■□□□□ 0.991e-11■□□□□ 10.8
ATP2A2-201ENST00000308664 RBM25P49756 843 aaKnown RBP21.26■□□□□ 0.99
ATP2A2-201ENST00000308664 DDX19AQ9NUU7 478 aaKnown RBP21.26■□□□□ 0.99
ATP2A2-201ENST00000308664 NECAB1Q8N987 351 aa21.25■□□□□ 0.99
ATP2A2-201ENST00000308664 NOL7Q9UMY1 257 aaKnown RBP21.25■□□□□ 0.99
ATP2A2-201ENST00000308664 CBFA2T2O43439 604 aa21.25■□□□□ 0.99
ATP2A2-201ENST00000308664 ERLIN1O75477 346 aa21.25■□□□□ 0.99
ATP2A2-201ENST00000308664 TSPYL6Q8N831 410 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms