RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 C8orf58Q8NAV2 365 aa25.97■■□□□ 1.75
SCAMP3-201ENST00000302631 CNTNAP4Q9C0A0 1308 aa25.97■■□□□ 1.75
SCAMP3-201ENST00000302631 AKT1S1Q96B36 256 aa25.96■■□□□ 1.75
SCAMP3-201ENST00000302631 STARD3NLO95772 234 aa25.95■■□□□ 1.74
SCAMP3-201ENST00000302631 UBR3Q6ZT12 1888 aa25.94■■□□□ 1.74
SCAMP3-201ENST00000302631 EXOSC9Q06265 439 aaKnown RBP25.94■■□□□ 1.74
SCAMP3-201ENST00000302631 INTS5Q6P9B9 1019 aaKnown RBP25.94■■□□□ 1.74
SCAMP3-201ENST00000302631 TSPYL6Q8N831 410 aa25.94■■□□□ 1.74
SCAMP3-201ENST00000302631 QSER1Q2KHR3 1735 aa25.94■■□□□ 1.74
SCAMP3-201ENST00000302631 CRKLP46109 303 aaKnown RBP25.93■■□□□ 1.74
SCAMP3-201ENST00000302631 TUBGCP6Q96RT7 1819 aa25.92■■□□□ 1.74
SCAMP3-201ENST00000302631 ANO8Q9HCE9 1232 aaPredicted RBP25.92■■□□□ 1.74
SCAMP3-201ENST00000302631 ZNF827Q17R98 1081 aa25.91■■□□□ 1.74
SCAMP3-201ENST00000302631 VAMP4O75379 141 aa25.9■■□□□ 1.74
SCAMP3-201ENST00000302631 TWISTNBQ3B726 338 aaPredicted RBP25.9■■□□□ 1.74
SCAMP3-201ENST00000302631 CCDC87Q9NVE4 849 aa25.9■■□□□ 1.74
SCAMP3-201ENST00000302631 ERBB4Q15303 1308 aa25.9■■□□□ 1.74
SCAMP3-201ENST00000302631 SLC15A2Q16348 729 aa25.89■■□□□ 1.74
SCAMP3-201ENST00000302631 ELL2O00472 640 aaPredicted RBP25.88■■□□□ 1.73
SCAMP3-201ENST00000302631 A1BGP04217 495 aa25.88■■□□□ 1.73
SCAMP3-201ENST00000302631 NBPF14Q5TI25 921 aa25.88■■□□□ 1.73
SCAMP3-201ENST00000302631 YTHDC1Q96MU7 727 aaKnown RBP25.88■■□□□ 1.73
SCAMP3-201ENST00000302631 CACNA1FO60840 1977 aa25.88■■□□□ 1.73
SCAMP3-201ENST00000302631 RPS6KA4O75676 772 aa25.88■■□□□ 1.73
SCAMP3-201ENST00000302631 ZBTB1Q9Y2K1 713 aa25.88■■□□□ 1.73
SCAMP3-201ENST00000302631 NBPF26B4DH59 902 aa25.87■■□□□ 1.73
SCAMP3-201ENST00000302631 PDIA6Q15084 440 aa25.87■■□□□ 1.73
SCAMP3-201ENST00000302631 NBPF10Q6P3W6 841 aaKnown RBP25.87■■□□□ 1.73
SCAMP3-201ENST00000302631 NBPF15Q8N660 670 aa25.87■■□□□ 1.73
SCAMP3-201ENST00000302631 CHMP4AQ9BY43 222 aa25.87■■□□□ 1.73
SCAMP3-201ENST00000302631 STK32BQ9NY57 414 aa25.87■■□□□ 1.73
SCAMP3-201ENST00000302631 CT47B1P0C2W7 299 aaPredicted RBP25.86■■□□□ 1.73
SCAMP3-201ENST00000302631 EIF2S2P20042 333 aaKnown RBP25.86■■□□□ 1.73
SCAMP3-201ENST00000302631 HDGFL1Q5TGJ6 251 aa25.86■■□□□ 1.73
SCAMP3-201ENST00000302631 AK7Q96M32 723 aa25.86■■□□□ 1.73
SCAMP3-201ENST00000302631 IL6STP40189 918 aaPredicted RBP25.85■■□□□ 1.73
SCAMP3-201ENST00000302631 LRP10Q7Z4F1 713 aa25.85■■□□□ 1.73
SCAMP3-201ENST00000302631 AMIGO3Q86WK7 504 aa25.85■■□□□ 1.73
SCAMP3-201ENST00000302631 EIF5P55010 431 aaKnown RBP25.84■■□□□ 1.73
SCAMP3-201ENST00000302631 GNPATO15228 680 aa25.83■■□□□ 1.73
SCAMP3-201ENST00000302631 SSFA2P28290 1259 aa25.83■■□□□ 1.73
SCAMP3-201ENST00000302631 ZNF428Q96B54 188 aa25.83■■□□□ 1.73
SCAMP3-201ENST00000302631 ADRA2BP18089 450 aa25.82■■□□□ 1.72
SCAMP3-201ENST00000302631 CCDC30Q5VVM6 783 aa25.82■■□□□ 1.72
SCAMP3-201ENST00000302631 DDX21Q9NR30 783 aaKnown RBP eCLIP25.82■■□□□ 1.72
SCAMP3-201ENST00000302631 RTCBQ9Y3I0 505 aaKnown RBP25.82■■□□□ 1.72
SCAMP3-201ENST00000302631 CANXP27824 592 aaKnown RBP25.81■■□□□ 1.72
SCAMP3-201ENST00000302631 TFCP2L1Q9NZI6 479 aa25.81■■□□□ 1.72
SCAMP3-201ENST00000302631 DBF4Q9UBU7 674 aaPredicted RBP25.81■■□□□ 1.72
SCAMP3-201ENST00000302631 C4AP0C0L4 1744 aa25.81■■□□□ 1.72
SCAMP3-201ENST00000302631 FLAD1Q8NFF5 587 aa25.8■■□□□ 1.72
SCAMP3-201ENST00000302631 PNPLA7Q6ZV29 1317 aa25.8■■□□□ 1.72
SCAMP3-201ENST00000302631 NECTIN2Q92692 538 aa25.8■■□□□ 1.72
SCAMP3-201ENST00000302631 CHPF2Q9P2E5 772 aa25.8■■□□□ 1.72
SCAMP3-201ENST00000302631 PIP4K2AP48426 406 aaPredicted RBP25.79■■□□□ 1.72
SCAMP3-201ENST00000302631 PROSER3Q2NL68 480 aa25.79■■□□□ 1.72
SCAMP3-201ENST00000302631 CASZ1Q86V15 1759 aa25.78■■□□□ 1.72
SCAMP3-201ENST00000302631 COL15A1P39059 1388 aa25.78■■□□□ 1.72
SCAMP3-201ENST00000302631 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.78■■□□□ 1.72
SCAMP3-201ENST00000302631 TRAPPC3LQ5T215 181 aa25.77■■□□□ 1.72
SCAMP3-201ENST00000302631 SMIM5Q71RC9 77 aa25.77■■□□□ 1.72
SCAMP3-201ENST00000302631 ARHGEF1Q92888 912 aaKnown RBP25.77■■□□□ 1.72
SCAMP3-201ENST00000302631 COL23A1Q86Y22 540 aaPredicted RBP25.76■■□□□ 1.71
SCAMP3-201ENST00000302631 HYPKQ9NX55 129 aa25.76■■□□□ 1.71
SCAMP3-201ENST00000302631 A0A087WZG4 1122 aa25.75■■□□□ 1.71
SCAMP3-201ENST00000302631 ANXA1P04083 346 aa25.75■■□□□ 1.71
SCAMP3-201ENST00000302631 ALDH1L2Q3SY69 923 aa25.75■■□□□ 1.71
SCAMP3-201ENST00000302631 MYL6BP14649 208 aa25.74■■□□□ 1.71
SCAMP3-201ENST00000302631 R3HDM1Q15032 1099 aaKnown RBP25.74■■□□□ 1.71
SCAMP3-201ENST00000302631 BCORQ6W2J9 1755 aa25.73■■□□□ 1.71
SCAMP3-201ENST00000302631 STK31Q9BXU1 1019 aa25.73■■□□□ 1.71
SCAMP3-201ENST00000302631 PHF14O94880 888 aa25.72■■□□□ 1.71
SCAMP3-201ENST00000302631 BRPF1P55201 1214 aaPredicted RBP25.72■■□□□ 1.71
SCAMP3-201ENST00000302631 NARFQ9UHQ1 456 aa25.72■■□□□ 1.71
SCAMP3-201ENST00000302631 SLC4A2P04920 1241 aa25.71■■□□□ 1.71
SCAMP3-201ENST00000302631 RARSP54136 660 aaKnown RBP25.71■■□□□ 1.71
SCAMP3-201ENST00000302631 SSH1Q8WYL5 1049 aa25.71■■□□□ 1.71
SCAMP3-201ENST00000302631 USP42Q9H9J4 1324 aaKnown RBP25.71■■□□□ 1.71
SCAMP3-201ENST00000302631 TCERG1O14776 1098 aaKnown RBP25.71■■□□□ 1.71
SCAMP3-201ENST00000302631 RGL2O15211 777 aa25.71■■□□□ 1.71
SCAMP3-201ENST00000302631 COL24A1Q17RW2 1714 aa25.71■■□□□ 1.71
SCAMP3-201ENST00000302631 SCN7AQ01118 1682 aa25.7■■□□□ 1.71
SCAMP3-201ENST00000302631 RFC4P35249 363 aa25.7■■□□□ 1.7
SCAMP3-201ENST00000302631 TTLL7Q6ZT98 887 aa25.7■■□□□ 1.7
SCAMP3-201ENST00000302631 COPS6Q7L5N1 327 aa25.7■■□□□ 1.7
SCAMP3-201ENST00000302631 DZIP3Q86Y13 1208 aaKnown RBP25.7■■□□□ 1.7
SCAMP3-201ENST00000302631 MRPL50Q8N5N7 158 aaKnown RBP25.7■■□□□ 1.7
SCAMP3-201ENST00000302631 SLC16A10Q8TF71 515 aa25.7■■□□□ 1.7
SCAMP3-201ENST00000302631 XAGE3Q8WTP9 111 aa25.7■■□□□ 1.7
SCAMP3-201ENST00000302631 PDGFDQ9GZP0 370 aaPredicted RBP25.7■■□□□ 1.7
SCAMP3-201ENST00000302631 PHAXQ9H814 394 aaKnown RBP25.7■■□□□ 1.7
SCAMP3-201ENST00000302631 CAMTA2O94983 1202 aa25.69■■□□□ 1.7
SCAMP3-201ENST00000302631 NUP98P52948 1817 aa25.69■■□□□ 1.7
SCAMP3-201ENST00000302631 ERVV-1B6SEH8 477 aa25.68■■□□□ 1.7
SCAMP3-201ENST00000302631 G2E3Q7L622 706 aa25.68■■□□□ 1.7
SCAMP3-201ENST00000302631 NPM2Q86SE8 214 aaKnown RBP25.68■■□□□ 1.7
SCAMP3-201ENST00000302631 TBC1D2BQ9UPU7 963 aa25.68■■□□□ 1.7
SCAMP3-201ENST00000302631 PSDA5PKW4 1024 aaPredicted RBP25.67■■□□□ 1.7
SCAMP3-201ENST00000302631 BCL2L12Q9HB09 334 aa25.67■■□□□ 1.7
SCAMP3-201ENST00000302631 ZNF330Q9Y3S2 320 aaPredicted RBP25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 239.9 ms