RNA–Protein interactions for RNA: ENST00000294635.4

LRRC53-201, Transcript of leucine rich repeat containing 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC53, Length 3,859 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53-201ENST00000294635 ZNF496Q96IT1 587 aaPredicted RBP6.58□□□□□ -1.36
LRRC53-201ENST00000294635 SLC4A9Q96Q91 983 aa6.58□□□□□ -1.36
LRRC53-201ENST00000294635 MBIPQ9NS73 344 aa6.58□□□□□ -1.36
LRRC53-201ENST00000294635 LRRC4BQ9NT99 713 aa6.58□□□□□ -1.36
LRRC53-201ENST00000294635 PPP1R1BQ9UD71 204 aaPredicted RBP6.58□□□□□ -1.36
LRRC53-201ENST00000294635 RPS6KA4O75676 772 aa6.58□□□□□ -1.36
LRRC53-201ENST00000294635 ITPK1Q13572 414 aa6.58□□□□□ -1.36
LRRC53-201ENST00000294635 SLC15A2Q16348 729 aa6.58□□□□□ -1.36
LRRC53-201ENST00000294635 LINC00116Q8NCU8 138 aa6.58□□□□□ -1.36
LRRC53-201ENST00000294635 IL6STP40189 918 aaPredicted RBP6.57□□□□□ -1.36
LRRC53-201ENST00000294635 SLFN5Q08AF3 891 aa6.57□□□□□ -1.36
LRRC53-201ENST00000294635 NEUROD2Q15784 382 aa6.57□□□□□ -1.36
LRRC53-201ENST00000294635 CCDC87Q9NVE4 849 aa6.57□□□□□ -1.36
LRRC53-201ENST00000294635 INTS5Q6P9B9 1019 aaKnown RBP6.57□□□□□ -1.36
LRRC53-201ENST00000294635 DEFB132Q7Z7B7 95 aa6.57□□□□□ -1.36
LRRC53-201ENST00000294635 FANCIQ9NVI1 1328 aa6.57□□□□□ -1.36
LRRC53-201ENST00000294635 SLC39A6Q13433 755 aa6.56□□□□□ -1.36
LRRC53-201ENST00000294635 RBM42Q9BTD8 480 aaKnown RBP6.56□□□□□ -1.36
LRRC53-201ENST00000294635 THUMPD2Q9BTF0 503 aaKnown RBP6.56□□□□□ -1.36
LRRC53-201ENST00000294635 MYH14Q7Z406 1995 aaKnown RBP6.56□□□□□ -1.36
LRRC53-201ENST00000294635 NRXN2Q9P2S2 1712 aa6.56□□□□□ -1.36
LRRC53-201ENST00000294635 N4BP2Q86UW6 1770 aaPredicted RBP6.56□□□□□ -1.36
LRRC53-201ENST00000294635 CRKLP46109 303 aaKnown RBP6.56□□□□□ -1.36
LRRC53-201ENST00000294635 AK7Q96M32 723 aa6.56□□□□□ -1.36
LRRC53-201ENST00000294635 BRPF1P55201 1214 aaPredicted RBP6.56□□□□□ -1.36
LRRC53-201ENST00000294635 ANKRD36CQ5JPF3 1778 aa6.56□□□□□ -1.36
LRRC53-201ENST00000294635 KCNQ3O43525 872 aa6.55□□□□□ -1.36
LRRC53-201ENST00000294635 DNAJC10Q8IXB1 793 aa6.55□□□□□ -1.36
LRRC53-201ENST00000294635 EIF5P55010 431 aaKnown RBP6.55□□□□□ -1.36
LRRC53-201ENST00000294635 RTCBQ9Y3I0 505 aaKnown RBP6.55□□□□□ -1.36
LRRC53-201ENST00000294635 PNPLA7Q6ZV29 1317 aa6.55□□□□□ -1.36
LRRC53-201ENST00000294635 ERVV-1B6SEH8 477 aa6.55□□□□□ -1.36
LRRC53-201ENST00000294635 ZNF827Q17R98 1081 aa6.55□□□□□ -1.36
LRRC53-201ENST00000294635 ALDH1L2Q3SY69 923 aa6.55□□□□□ -1.36
LRRC53-201ENST00000294635 CCDC30Q5VVM6 783 aa6.55□□□□□ -1.36
LRRC53-201ENST00000294635 DUSP27Q5VZP5 1158 aa6.55□□□□□ -1.36
LRRC53-201ENST00000294635 HYPKQ9NX55 129 aa6.55□□□□□ -1.36
LRRC53-201ENST00000294635 COL15A1P39059 1388 aa6.55□□□□□ -1.36
LRRC53-201ENST00000294635 PTCD1O75127 700 aaKnown RBP6.54□□□□□ -1.36
LRRC53-201ENST00000294635 CDCA7LQ96GN5 454 aa6.54□□□□□ -1.36
LRRC53-201ENST00000294635 DDX21Q9NR30 783 aaKnown RBP eCLIP6.54□□□□□ -1.36
LRRC53-201ENST00000294635 DBF4Q9UBU7 674 aaPredicted RBP6.54□□□□□ -1.36
LRRC53-201ENST00000294635 KAT6BQ8WYB5 2073 aa6.54□□□□□ -1.36
LRRC53-201ENST00000294635 KIF13BQ9NQT8 1826 aa6.54□□□□□ -1.36
LRRC53-201ENST00000294635 ATP10DQ9P241 1426 aa6.54□□□□□ -1.36
LRRC53-201ENST00000294635 CLEC4GQ6UXB4 293 aa6.54□□□□□ -1.36
LRRC53-201ENST00000294635 LRP10Q7Z4F1 713 aa6.54□□□□□ -1.36
LRRC53-201ENST00000294635 RIC1Q4ADV7 1423 aa6.54□□□□□ -1.36
LRRC53-201ENST00000294635 TRAPPC3LQ5T215 181 aa6.54□□□□□ -1.36
LRRC53-201ENST00000294635 ANO8Q9HCE9 1232 aaPredicted RBP6.54□□□□□ -1.36
LRRC53-201ENST00000294635 NARFQ9UHQ1 456 aa6.54□□□□□ -1.36
LRRC53-201ENST00000294635 PXDNLA1KZ92 1463 aa6.54□□□□□ -1.36
LRRC53-201ENST00000294635 PDIA6Q15084 440 aa6.53□□□□□ -1.36
LRRC53-201ENST00000294635 ARFGEF2Q9Y6D5 1785 aa6.53□□□□□ -1.36
LRRC53-201ENST00000294635 RNF123Q5XPI4 1314 aa6.53□□□□□ -1.36
LRRC53-201ENST00000294635 USP42Q9H9J4 1324 aaKnown RBP6.53□□□□□ -1.36
LRRC53-201ENST00000294635 VAMP4O75379 141 aa6.53□□□□□ -1.36
LRRC53-201ENST00000294635 TWISTNBQ3B726 338 aaPredicted RBP6.53□□□□□ -1.36
LRRC53-201ENST00000294635 MIS18AQ9NYP9 233 aa6.53□□□□□ -1.36
LRRC53-201ENST00000294635 TFCP2L1Q9NZI6 479 aa6.53□□□□□ -1.36
LRRC53-201ENST00000294635 GNPATO15228 680 aa6.53□□□□□ -1.36
LRRC53-201ENST00000294635 MTFR1LQ9H019 292 aa6.53□□□□□ -1.36
LRRC53-201ENST00000294635 SPINK5Q9NQ38 1064 aaPredicted RBP6.53□□□□□ -1.36
LRRC53-201ENST00000294635 USP16Q9Y5T5 823 aa6.53□□□□□ -1.36
LRRC53-201ENST00000294635 HDGFL1Q5TGJ6 251 aa6.52□□□□□ -1.36
LRRC53-201ENST00000294635 C8orf58Q8NAV2 365 aa6.52□□□□□ -1.36
LRRC53-201ENST00000294635 LAS1LQ9Y4W2 734 aaKnown RBP6.52□□□□□ -1.36
LRRC53-201ENST00000294635 LAMB2P55268 1798 aa6.52□□□□□ -1.37
LRRC53-201ENST00000294635 NBPF26B4DH59 902 aa6.52□□□□□ -1.37
LRRC53-201ENST00000294635 NBPF10Q6P3W6 841 aaKnown RBP6.52□□□□□ -1.37
LRRC53-201ENST00000294635 NBPF15Q8N660 670 aa6.52□□□□□ -1.37
LRRC53-201ENST00000294635 ZNF652Q9Y2D9 606 aa6.52□□□□□ -1.37
LRRC53-201ENST00000294635 COL23A1Q86Y22 540 aaPredicted RBP6.52□□□□□ -1.37
LRRC53-201ENST00000294635 NLGN1Q8N2Q7 840 aa6.52□□□□□ -1.37
LRRC53-201ENST00000294635 ZBTB1Q9Y2K1 713 aa6.52□□□□□ -1.37
LRRC53-201ENST00000294635 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.51□□□□□ -1.37
LRRC53-201ENST00000294635 EXOSC9Q06265 439 aaKnown RBP6.51□□□□□ -1.37
LRRC53-201ENST00000294635 HSP90AB3PQ58FF7 597 aa6.51□□□□□ -1.37
LRRC53-201ENST00000294635 ARHGEF1Q92888 912 aaKnown RBP6.51□□□□□ -1.37
LRRC53-201ENST00000294635 STK31Q9BXU1 1019 aa6.51□□□□□ -1.37
LRRC53-201ENST00000294635 NUP98P52948 1817 aa6.51□□□□□ -1.37
LRRC53-201ENST00000294635 PTPRCP08575 1304 aa6.51□□□□□ -1.37
LRRC53-201ENST00000294635 MAP3K15Q6ZN16 1313 aa6.51□□□□□ -1.37
LRRC53-201ENST00000294635 CAMTA2O94983 1202 aa6.51□□□□□ -1.37
LRRC53-201ENST00000294635 KIF6Q6ZMV9 814 aa6.51□□□□□ -1.37
LRRC53-201ENST00000294635 TSR2Q969E8 191 aaKnown RBP6.51□□□□□ -1.37
LRRC53-201ENST00000294635 PDZRN3Q9UPQ7 1066 aa6.51□□□□□ -1.37
LRRC53-201ENST00000294635 RFC4P35249 363 aa6.51□□□□□ -1.37
LRRC53-201ENST00000294635 PLBD2Q8NHP8 589 aa6.51□□□□□ -1.37
LRRC53-201ENST00000294635 ZPR1O75312 459 aa6.5□□□□□ -1.37
LRRC53-201ENST00000294635 DDX58O95786 925 aaKnown RBP6.5□□□□□ -1.37
LRRC53-201ENST00000294635 A1BGP04217 495 aa6.5□□□□□ -1.37
LRRC53-201ENST00000294635 ARHGAP45Q92619 1136 aa6.5□□□□□ -1.37
LRRC53-201ENST00000294635 DLEC1Q9Y238 1755 aa6.5□□□□□ -1.37
LRRC53-201ENST00000294635 TRIM28Q13263 835 aaKnown RBP6.5□□□□□ -1.37
LRRC53-201ENST00000294635 NPM2Q86SE8 214 aaKnown RBP6.5□□□□□ -1.37
LRRC53-201ENST00000294635 SGIP1Q9BQI5 828 aa6.5□□□□□ -1.37
LRRC53-201ENST00000294635 PRAMEF22A3QJZ6 481 aa6.5□□□□□ -1.37
LRRC53-201ENST00000294635 GYS1P13807 737 aa6.5□□□□□ -1.37
LRRC53-201ENST00000294635 TM4SF1P30408 202 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms