RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 IFNL2Q8IZJ0 200 aa17.24■□□□□ 0.35
NXF1-201ENST00000294172 IL1RAPL2Q9NP60 686 aa17.24■□□□□ 0.35
NXF1-201ENST00000294172 HSP90AB1P08238 724 aaKnown RBP17.24■□□□□ 0.35
NXF1-201ENST00000294172 KSR2Q6VAB6 950 aa17.23■□□□□ 0.35
NXF1-201ENST00000294172 HYPKQ9NX55 129 aa17.23■□□□□ 0.35
NXF1-201ENST00000294172 KDM6AO15550 1401 aaPredicted RBP17.23■□□□□ 0.35
NXF1-201ENST00000294172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.22■□□□□ 0.351e-6■■□□□ 13.7
NXF1-201ENST00000294172 N4BP2Q86UW6 1770 aaPredicted RBP17.22■□□□□ 0.35
NXF1-201ENST00000294172 USP26Q9BXU7 913 aa17.22■□□□□ 0.35
NXF1-201ENST00000294172 C9orf78Q9NZ63 289 aaPredicted RBP17.22■□□□□ 0.35
NXF1-201ENST00000294172 CD2BP2O95400 341 aaKnown RBP17.21■□□□□ 0.35
NXF1-201ENST00000294172 SALL3Q9BXA9 1300 aa17.21■□□□□ 0.35
NXF1-201ENST00000294172 ZNF335Q9H4Z2 1342 aaPredicted RBP17.21■□□□□ 0.35
NXF1-201ENST00000294172 COL18A1P39060 1754 aa17.21■□□□□ 0.35
NXF1-201ENST00000294172 CYP27B1O15528 508 aa17.21■□□□□ 0.35
NXF1-201ENST00000294172 POLA2Q14181 598 aa17.21■□□□□ 0.35
NXF1-201ENST00000294172 CWF19L2Q2TBE0 894 aaKnown RBP17.21■□□□□ 0.35
NXF1-201ENST00000294172 DDX21Q9NR30 783 aaKnown RBP eCLIP17.21■□□□□ 0.35
NXF1-201ENST00000294172 CHMP5Q9NZZ3 219 aa17.21■□□□□ 0.35
NXF1-201ENST00000294172 SLAIN2Q9P270 581 aa17.21■□□□□ 0.35
NXF1-201ENST00000294172 TRIM6-TRIM34B2RNG4 842 aa17.2■□□□□ 0.34
NXF1-201ENST00000294172 MYL6BP14649 208 aa17.2■□□□□ 0.34
NXF1-201ENST00000294172 GSE1Q14687 1217 aa17.2■□□□□ 0.34
NXF1-201ENST00000294172 NUTM1Q86Y26 1132 aa17.2■□□□□ 0.34
NXF1-201ENST00000294172 RILPL2Q969X0 211 aa17.2■□□□□ 0.34
NXF1-201ENST00000294172 PRDM11Q9NQV5 511 aa17.2■□□□□ 0.34
NXF1-201ENST00000294172 CPDO75976 1380 aa17.19■□□□□ 0.34
NXF1-201ENST00000294172 ERC2O15083 957 aa17.19■□□□□ 0.34
NXF1-201ENST00000294172 RAB11FIP3O75154 756 aa17.19■□□□□ 0.34
NXF1-201ENST00000294172 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
NXF1-201ENST00000294172 HSP90AA1P07900 732 aaKnown RBP17.19■□□□□ 0.34
NXF1-201ENST00000294172 PDIA6Q15084 440 aa17.19■□□□□ 0.34
NXF1-201ENST00000294172 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
NXF1-201ENST00000294172 ZNF496Q96IT1 587 aaPredicted RBP17.19■□□□□ 0.34
NXF1-201ENST00000294172 DCAF5Q96JK2 942 aa17.19■□□□□ 0.34
NXF1-201ENST00000294172 REC8O95072 547 aa17.19■□□□□ 0.34
NXF1-201ENST00000294172 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
NXF1-201ENST00000294172 SIPA1L3O60292 1781 aaPredicted RBP17.19■□□□□ 0.34
NXF1-201ENST00000294172 KDM4FA0A1W2PPD8 638 aa17.18■□□□□ 0.34
NXF1-201ENST00000294172 ALDH1L1O75891 902 aa17.18■□□□□ 0.34
NXF1-201ENST00000294172 RHPN1Q8TCX5 695 aa17.18■□□□□ 0.34
NXF1-201ENST00000294172 LMTK3Q96Q04 1460 aa17.18■□□□□ 0.34
NXF1-201ENST00000294172 K7ELQ4 463 aaPredicted RBP17.18■□□□□ 0.34
NXF1-201ENST00000294172 OS9Q13438 667 aaPredicted RBP17.18■□□□□ 0.34
NXF1-201ENST00000294172 TOM1L2Q6ZVM7 507 aa17.18■□□□□ 0.34
NXF1-201ENST00000294172 RIC3Q7Z5B4 369 aa17.18■□□□□ 0.34
NXF1-201ENST00000294172 STAP2Q9UGK3 403 aa17.18■□□□□ 0.34
NXF1-201ENST00000294172 ADAMTS7Q9UKP4 1686 aa17.17■□□□□ 0.34
NXF1-201ENST00000294172 XIRP1Q702N8 1843 aaKnown RBP17.17■□□□□ 0.34
NXF1-201ENST00000294172 CABP4P57796 275 aa17.17■□□□□ 0.34
NXF1-201ENST00000294172 RABEP1Q15276 862 aa17.16■□□□□ 0.34
NXF1-201ENST00000294172 KIF1BPQ96EK5 621 aa17.16■□□□□ 0.34
NXF1-201ENST00000294172 PIP4K2AP48426 406 aaPredicted RBP17.16■□□□□ 0.34
NXF1-201ENST00000294172 LINS1Q8NG48 757 aa17.16■□□□□ 0.34
NXF1-201ENST00000294172 XAGE3Q8WTP9 111 aa17.15■□□□□ 0.34
NXF1-201ENST00000294172 CRYBG1Q9Y4K1 1723 aa17.15■□□□□ 0.34
NXF1-201ENST00000294172 USP16Q9Y5T5 823 aa17.15■□□□□ 0.34
NXF1-201ENST00000294172 SCN11AQ9UI33 1791 aa17.15■□□□□ 0.34
NXF1-201ENST00000294172 SNRPA1P09661 255 aaKnown RBP17.15■□□□□ 0.34
NXF1-201ENST00000294172 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
NXF1-201ENST00000294172 GRM8O00222 908 aa17.14■□□□□ 0.33
NXF1-201ENST00000294172 MAP4K4O95819 1239 aaPredicted RBP17.14■□□□□ 0.33
NXF1-201ENST00000294172 HSP90AB4PQ58FF6 505 aa17.14■□□□□ 0.33
NXF1-201ENST00000294172 COPS6Q7L5N1 327 aa17.14■□□□□ 0.33
NXF1-201ENST00000294172 SOS2Q07890 1332 aaPredicted RBP17.14■□□□□ 0.33
NXF1-201ENST00000294172 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
NXF1-201ENST00000294172 ESYT1Q9BSJ8 1104 aa17.14■□□□□ 0.33
NXF1-201ENST00000294172 STRCQ7RTU9 1775 aa17.14■□□□□ 0.33
NXF1-201ENST00000294172 WDR17Q8IZU2 1322 aa17.13■□□□□ 0.33
NXF1-201ENST00000294172 HDAC5Q9UQL6 1122 aa17.13■□□□□ 0.33
NXF1-201ENST00000294172 ABCC6O95255 1503 aa17.13■□□□□ 0.33
NXF1-201ENST00000294172 CHMLP26374 656 aa17.13■□□□□ 0.33
NXF1-201ENST00000294172 DDIT3P35638 169 aa17.13■□□□□ 0.33
NXF1-201ENST00000294172 NEXNQ0ZGT2 675 aa17.13■□□□□ 0.33
NXF1-201ENST00000294172 MTX1Q13505 466 aa17.13■□□□□ 0.33
NXF1-201ENST00000294172 LARP1Q6PKG0 1096 aaKnown RBP17.13■□□□□ 0.33
NXF1-201ENST00000294172 SUCLG2Q96I99 432 aa17.13■□□□□ 0.33
NXF1-201ENST00000294172 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
NXF1-201ENST00000294172 IGKV5-2P06315 115 aa17.12■□□□□ 0.33
NXF1-201ENST00000294172 ZCRB1Q8TBF4 217 aaKnown RBP17.12■□□□□ 0.33
NXF1-201ENST00000294172 STRN4Q9NRL3 753 aa17.12■□□□□ 0.33
NXF1-201ENST00000294172 AOX1Q06278 1338 aa17.12■□□□□ 0.33
NXF1-201ENST00000294172 MCM4P33991 863 aa17.12■□□□□ 0.33
NXF1-201ENST00000294172 MYD88Q99836 296 aa17.12■□□□□ 0.33
NXF1-201ENST00000294172 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
NXF1-201ENST00000294172 ANO2Q9NQ90 1003 aa17.11■□□□□ 0.33
NXF1-201ENST00000294172 C5P01031 1676 aa17.11■□□□□ 0.33
NXF1-201ENST00000294172 PI4K2BQ8TCG2 481 aa17.1■□□□□ 0.33
NXF1-201ENST00000294172 ANKRD13DQ6ZTN6 518 aa17.1■□□□□ 0.33
NXF1-201ENST00000294172 KAZALD1Q96I82 304 aa17.1■□□□□ 0.33
NXF1-201ENST00000294172 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
NXF1-201ENST00000294172 PRKCSHP14314 528 aaPredicted RBP17.09■□□□□ 0.33
NXF1-201ENST00000294172 EVA1CP58658 441 aa17.09■□□□□ 0.33
NXF1-201ENST00000294172 CLASRPQ8N2M8 674 aaKnown RBP17.09■□□□□ 0.33
NXF1-201ENST00000294172 DDX54Q8TDD1 881 aaKnown RBP17.09■□□□□ 0.33
NXF1-201ENST00000294172 PCDH11XQ9BZA7 1347 aa17.09■□□□□ 0.33
NXF1-201ENST00000294172 PCDH11YQ9BZA8 1340 aa17.09■□□□□ 0.33
NXF1-201ENST00000294172 PLEKHG2Q9H7P9 1386 aa17.09■□□□□ 0.33
NXF1-201ENST00000294172 ST18O60284 1047 aa17.09■□□□□ 0.33
NXF1-201ENST00000294172 METTL22Q9BUU2 404 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms