RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 UHRF1BP1LA0JNW5 1464 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 BMP2KLQ5H9B9 411 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 CEP85Q6P2H3 762 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 PTPRTO14522 1441 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 PREX2Q70Z35 1606 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 METTL24Q5JXM2 366 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 ERC1Q8IUD2 1116 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 MPHOSPH8Q99549 860 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 PIK3C2GO75747 1445 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 COPS6Q7L5N1 327 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 XAGE3Q8WTP9 111 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 TNMDQ9H2S6 317 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 AK9Q5TCS8 1911 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 KCNQ3O43525 872 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 PDE1AP54750 535 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 HDAC1Q13547 482 aaPredicted RBP5.69□□□□□ -1.5
UBR1-201ENST00000290650 CPLX2Q6PUV4 134 aaKnown RBP5.69□□□□□ -1.5
UBR1-201ENST00000290650 PLEKHM2Q8IWE5 1019 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 TMX1Q9H3N1 280 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 ZBTB7BO15156 539 aaPredicted RBP5.68□□□□□ -1.5
UBR1-201ENST00000290650 BAG4O95429 457 aaKnown RBP5.68□□□□□ -1.5
UBR1-201ENST00000290650 IL13P35225 146 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 SPATA32Q96LK8 384 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 PNMA6EA0A0J9YXQ4 647 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 MINDY4BA8MYZ0 360 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 PPP1R1BQ9UD71 204 aaPredicted RBP5.68□□□□□ -1.5
UBR1-201ENST00000290650 WDR33Q9C0J8 1336 aaKnown RBP5.68□□□□□ -1.5
UBR1-201ENST00000290650 KCNH5Q8NCM2 988 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 NOC3LQ8WTT2 800 aaKnown RBP5.68□□□□□ -1.5
UBR1-201ENST00000290650 CEP126Q9P2H0 1117 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 WWC3Q9ULE0 1092 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 BLMP54132 1417 aaPredicted RBP5.68□□□□□ -1.5
UBR1-201ENST00000290650 NSD2O96028 1365 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 PTPRCP08575 1304 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 GJB2P29033 226 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 LTKP29376 864 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 STK38Q15208 465 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 TMX3Q96JJ7 454 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 TMOD3Q9NYL9 352 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 DBF4Q9UBU7 674 aaPredicted RBP5.68□□□□□ -1.5
UBR1-201ENST00000290650 TBC1D2BQ9UPU7 963 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 JAG2Q9Y219 1238 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 CNPY2Q9Y2B0 182 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 KINO60870 393 aaKnown RBP5.68□□□□□ -1.5
UBR1-201ENST00000290650 RHPN1Q8TCX5 695 aa5.68□□□□□ -1.5
UBR1-201ENST00000290650 PLA2R1Q13018 1463 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 USP25Q9UHP3 1055 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 POGZQ7Z3K3 1410 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 IFIT1P09914 478 aaKnown RBP5.67□□□□□ -1.5
UBR1-201ENST00000290650 LRRFIP1Q32MZ4 808 aaKnown RBP5.67□□□□□ -1.5
UBR1-201ENST00000290650 FILIP1Q7Z7B0 1213 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 CWC22Q9HCG8 908 aaKnown RBP5.67□□□□□ -1.5
UBR1-201ENST00000290650 CEP152O94986 1710 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 GLRX3O76003 335 aaKnown RBP5.67□□□□□ -1.5
UBR1-201ENST00000290650 TDO2P48775 406 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 HSP90AA4PQ58FG1 418 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 GIMAP6Q6P9H5 292 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 KDM5DQ9BY66 1539 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 POLR3DP05423 398 aaPredicted RBP5.67□□□□□ -1.5
UBR1-201ENST00000290650 HOXC9P31274 260 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 ANKRD44Q8N8A2 993 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 HELBQ8NG08 1087 aaPredicted RBP5.67□□□□□ -1.5
UBR1-201ENST00000290650 NOL10Q9BSC4 688 aaKnown RBP5.67□□□□□ -1.5
UBR1-201ENST00000290650 LRP2BPQ9P2M1 347 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 ZNF219Q9P2Y4 722 aaPredicted RBP5.67□□□□□ -1.5
UBR1-201ENST00000290650 ESPNB1AK53 854 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 BIN1O00499 593 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 LARP1Q6PKG0 1096 aaKnown RBP5.67□□□□□ -1.5
UBR1-201ENST00000290650 CCDC129Q6ZRS4 1044 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 RAI14Q9P0K7 980 aa5.67□□□□□ -1.5
UBR1-201ENST00000290650 ERVK-7P63135 1459 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 CCDC173Q0VFZ6 552 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 BICC1Q9H694 974 aaKnown RBP5.66□□□□□ -1.5
UBR1-201ENST00000290650 TRPM1Q7Z4N2 1603 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 CLTCL1P53675 1640 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 KRT85P78386 507 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 SKIDA1Q1XH10 827 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 CCDC39Q9UFE4 941 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 ARHGEF5Q12774 1597 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 MCM2P49736 904 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 TRMT112Q9UI30 125 aaKnown RBP5.66□□□□□ -1.5
UBR1-201ENST00000290650 MBD3O95983 291 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 RXRAP19793 462 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 SAFBQ15424 915 aaKnown RBP eCLIP5.66□□□□□ -1.5
UBR1-201ENST00000290650 EDC3Q96F86 508 aaKnown RBP5.66□□□□□ -1.5
UBR1-201ENST00000290650 IKQ13123 557 aaPredicted RBP5.66□□□□□ -1.5
UBR1-201ENST00000290650 ESYT1Q9BSJ8 1104 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 IL16Q14005 1332 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 NBPF7P0C2Y1 421 aaPredicted RBP5.66□□□□□ -1.5
UBR1-201ENST00000290650 ZSCAN23Q3MJ62 389 aa5.66□□□□□ -1.5
UBR1-201ENST00000290650 ZNF594Q96JF6 807 aaPredicted RBP5.66□□□□□ -1.5
UBR1-201ENST00000290650 CROCC2H7BZ55 1655 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 HIP1O00291 1037 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 PKP1Q13835 747 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.65□□□□□ -1.5
UBR1-201ENST00000290650 ANKRD13DQ6ZTN6 518 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 UBE2Q2Q8WVN8 375 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 TRIM34Q9BYJ4 488 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 PRAMEF22A3QJZ6 481 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 CCDC69A6NI79 296 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms