RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 SSFA2P28290 1259 aa25.99■■□□□ 1.75
TIMP4-201ENST00000287814 WWC1Q8IX03 1113 aa25.99■■□□□ 1.75
TIMP4-201ENST00000287814 RTCBQ9Y3I0 505 aaKnown RBP25.99■■□□□ 1.75
TIMP4-201ENST00000287814 TEX13AQ9BXU3 409 aaPredicted RBP25.99■■□□□ 1.75
TIMP4-201ENST00000287814 ATF5Q9Y2D1 282 aaPredicted RBP25.99■■□□□ 1.75
TIMP4-201ENST00000287814 ZBTB1Q9Y2K1 713 aa25.99■■□□□ 1.75
TIMP4-201ENST00000287814 STARD3NLO95772 234 aa25.98■■□□□ 1.75
TIMP4-201ENST00000287814 ZNF853P0CG23 659 aa25.98■■□□□ 1.75
TIMP4-201ENST00000287814 FLAD1Q8NFF5 587 aa25.98■■□□□ 1.75
TIMP4-201ENST00000287814 NCBP3Q53F19 620 aaKnown RBP25.97■■□□□ 1.75
TIMP4-201ENST00000287814 CFAP44Q96MT7 982 aa25.97■■□□□ 1.75
TIMP4-201ENST00000287814 GIGYF1O75420 1035 aaPredicted RBP25.96■■□□□ 1.75
TIMP4-201ENST00000287814 A1BGP04217 495 aa25.96■■□□□ 1.75
TIMP4-201ENST00000287814 ARHGEF1Q92888 912 aaKnown RBP25.96■■□□□ 1.75
TIMP4-201ENST00000287814 MTFR1LQ9H019 292 aa25.96■■□□□ 1.75
TIMP4-201ENST00000287814 TRAPPC3LQ5T215 181 aa25.95■■□□□ 1.74
TIMP4-201ENST00000287814 SLC16A10Q8TF71 515 aa25.95■■□□□ 1.74
TIMP4-201ENST00000287814 SPON1Q9HCB6 807 aa25.95■■□□□ 1.74
TIMP4-201ENST00000287814 CANXP27824 592 aaKnown RBP25.94■■□□□ 1.74
TIMP4-201ENST00000287814 KRT24Q2M2I5 525 aa25.94■■□□□ 1.74
TIMP4-201ENST00000287814 MBIPQ9NS73 344 aa25.94■■□□□ 1.74
TIMP4-201ENST00000287814 SOS1Q07889 1333 aaPredicted RBP25.94■■□□□ 1.74
TIMP4-201ENST00000287814 IFT57Q9NWB7 429 aa25.93■■□□□ 1.74
TIMP4-201ENST00000287814 PTGER2P43116 358 aa25.93■■□□□ 1.74
TIMP4-201ENST00000287814 PIP4K2AP48426 406 aaPredicted RBP25.93■■□□□ 1.74
TIMP4-201ENST00000287814 CALD1Q05682 793 aaKnown RBP25.93■■□□□ 1.74
TIMP4-201ENST00000287814 ADRA2BP18089 450 aa25.92■■□□□ 1.74
TIMP4-201ENST00000287814 SGIP1Q9BQI5 828 aa25.92■■□□□ 1.74
TIMP4-201ENST00000287814 GNAI1P63096 354 aa25.91■■□□□ 1.74
TIMP4-201ENST00000287814 MSL1Q68DK7 614 aa25.91■■□□□ 1.74
TIMP4-201ENST00000287814 EIF5P55010 431 aaKnown RBP25.9■■□□□ 1.74
TIMP4-201ENST00000287814 NBPF26B4DH59 902 aa25.89■■□□□ 1.73
TIMP4-201ENST00000287814 RFC4P35249 363 aa25.89■■□□□ 1.73
TIMP4-201ENST00000287814 NBPF10Q6P3W6 841 aaKnown RBP25.89■■□□□ 1.73
TIMP4-201ENST00000287814 NBPF15Q8N660 670 aa25.89■■□□□ 1.73
TIMP4-201ENST00000287814 SRP68Q9UHB9 627 aaKnown RBP25.89■■□□□ 1.73
TIMP4-201ENST00000287814 LRP5O75197 1615 aa25.87■■□□□ 1.73
TIMP4-201ENST00000287814 WDR63Q8IWG1 891 aa25.87■■□□□ 1.73
TIMP4-201ENST00000287814 NGEFQ8N5V2 710 aa25.87■■□□□ 1.73
TIMP4-201ENST00000287814 TSR2Q969E8 191 aaKnown RBP25.87■■□□□ 1.73
TIMP4-201ENST00000287814 COL15A1P39059 1388 aa25.86■■□□□ 1.73
TIMP4-201ENST00000287814 IL6STP40189 918 aaPredicted RBP25.86■■□□□ 1.73
TIMP4-201ENST00000287814 SPINK5Q9NQ38 1064 aaPredicted RBP25.86■■□□□ 1.73
TIMP4-201ENST00000287814 IL16Q14005 1332 aa25.86■■□□□ 1.73
TIMP4-201ENST00000287814 GYS1P13807 737 aa25.85■■□□□ 1.73
TIMP4-201ENST00000287814 ZNF330Q9Y3S2 320 aaPredicted RBP25.85■■□□□ 1.73
TIMP4-201ENST00000287814 ZNF521Q96K83 1311 aa25.85■■□□□ 1.73
TIMP4-201ENST00000287814 EIF2S2P20042 333 aaKnown RBP25.84■■□□□ 1.73
TIMP4-201ENST00000287814 USP42Q9H9J4 1324 aaKnown RBP25.84■■□□□ 1.73
TIMP4-201ENST00000287814 C4AP0C0L4 1744 aa25.84■■□□□ 1.73
TIMP4-201ENST00000287814 C8orf58Q8NAV2 365 aa25.83■■□□□ 1.73
TIMP4-201ENST00000287814 COL24A1Q17RW2 1714 aa25.82■■□□□ 1.72
TIMP4-201ENST00000287814 LAMB4A4D0S4 1761 aa25.82■■□□□ 1.72
TIMP4-201ENST00000287814 DUSP27Q5VZP5 1158 aa25.82■■□□□ 1.72
TIMP4-201ENST00000287814 USPL1Q5W0Q7 1092 aa25.82■■□□□ 1.72
TIMP4-201ENST00000287814 NECTIN2Q92692 538 aa25.82■■□□□ 1.72
TIMP4-201ENST00000287814 TBC1D2BQ9UPU7 963 aa25.82■■□□□ 1.72
TIMP4-201ENST00000287814 ELL2O00472 640 aaPredicted RBP25.81■■□□□ 1.72
TIMP4-201ENST00000287814 NARFQ9UHQ1 456 aa25.81■■□□□ 1.72
TIMP4-201ENST00000287814 FKBP8Q14318 412 aa25.8■■□□□ 1.72
TIMP4-201ENST00000287814 PDIA6Q15084 440 aa25.8■■□□□ 1.72
TIMP4-201ENST00000287814 BCL2L12Q9HB09 334 aa25.8■■□□□ 1.72
TIMP4-201ENST00000287814 TSPYL6Q8N831 410 aa25.8■■□□□ 1.72
TIMP4-201ENST00000287814 ZPR1O75312 459 aa25.79■■□□□ 1.72
TIMP4-201ENST00000287814 POLD1P28340 1107 aa25.79■■□□□ 1.72
TIMP4-201ENST00000287814 ARXQ96QS3 562 aa25.79■■□□□ 1.72
TIMP4-201ENST00000287814 FANCIQ9NVI1 1328 aa25.78■■□□□ 1.72
TIMP4-201ENST00000287814 A0A087WZG4 1122 aa25.78■■□□□ 1.72
TIMP4-201ENST00000287814 MYL6BP14649 208 aa25.78■■□□□ 1.72
TIMP4-201ENST00000287814 PROSER3Q2NL68 480 aa25.78■■□□□ 1.72
TIMP4-201ENST00000287814 NLGN1Q8N2Q7 840 aa25.78■■□□□ 1.72
TIMP4-201ENST00000287814 ANXA1P04083 346 aa25.77■■□□□ 1.72
TIMP4-201ENST00000287814 HOXB7P09629 217 aa25.77■■□□□ 1.72
TIMP4-201ENST00000287814 LRP10Q7Z4F1 713 aa25.77■■□□□ 1.72
TIMP4-201ENST00000287814 PPP1R1BQ9UD71 204 aaPredicted RBP25.77■■□□□ 1.72
TIMP4-201ENST00000287814 DZIP3Q86Y13 1208 aaKnown RBP25.77■■□□□ 1.72
TIMP4-201ENST00000287814 ERBB4Q15303 1308 aa25.76■■□□□ 1.71
TIMP4-201ENST00000287814 CAMTA2O94983 1202 aa25.76■■□□□ 1.71
TIMP4-201ENST00000287814 MMP10P09238 476 aa25.76■■□□□ 1.71
TIMP4-201ENST00000287814 HDGFL1Q5TGJ6 251 aa25.75■■□□□ 1.71
TIMP4-201ENST00000287814 NPM2Q86SE8 214 aaKnown RBP25.75■■□□□ 1.71
TIMP4-201ENST00000287814 TM4SF1P30408 202 aa25.73■■□□□ 1.71
TIMP4-201ENST00000287814 TTLL7Q6ZT98 887 aa25.73■■□□□ 1.71
TIMP4-201ENST00000287814 CHPF2Q9P2E5 772 aa25.73■■□□□ 1.71
TIMP4-201ENST00000287814 DDX21Q9NR30 783 aaKnown RBP eCLIP25.72■■□□□ 1.71
TIMP4-201ENST00000287814 EXOSC9Q06265 439 aaKnown RBP25.71■■□□□ 1.71
TIMP4-201ENST00000287814 DDR1Q08345 913 aa25.71■■□□□ 1.71
TIMP4-201ENST00000287814 GOLGA2Q08379 1002 aa25.71■■□□□ 1.71
TIMP4-201ENST00000287814 FHDC1Q9C0D6 1143 aaPredicted RBP25.71■■□□□ 1.71
TIMP4-201ENST00000287814 NFIXQ14938 502 aa25.71■■□□□ 1.71
TIMP4-201ENST00000287814 CDCA7LQ96GN5 454 aa25.71■■□□□ 1.71
TIMP4-201ENST00000287814 TWISTNBQ3B726 338 aaPredicted RBP25.7■■□□□ 1.7
TIMP4-201ENST00000287814 MYH16Q9H6N6 1097 aa25.7■■□□□ 1.7
TIMP4-201ENST00000287814 HLFQ16534 295 aa25.69■■□□□ 1.7
TIMP4-201ENST00000287814 TBC1D9BQ66K14 1250 aa25.69■■□□□ 1.7
TIMP4-201ENST00000287814 SLFN5Q08AF3 891 aa25.68■■□□□ 1.7
TIMP4-201ENST00000287814 DBF4Q9UBU7 674 aaPredicted RBP25.68■■□□□ 1.7
TIMP4-201ENST00000287814 POLRMTO00411 1230 aaKnown RBP25.68■■□□□ 1.7
TIMP4-201ENST00000287814 BICDL1Q6ZP65 573 aa25.68■■□□□ 1.7
TIMP4-201ENST00000287814 SYT17Q9BSW7 474 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms