RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
TMEM47-201ENST00000275954 RHPN1Q8TCX5 695 aa17.13■□□□□ 0.33
TMEM47-201ENST00000275954 TBC1D2BQ9UPU7 963 aa17.13■□□□□ 0.33
TMEM47-201ENST00000275954 SHROOM2Q13796 1616 aa17.13■□□□□ 0.33
TMEM47-201ENST00000275954 DDX11Q96FC9 970 aa17.13■□□□□ 0.33
TMEM47-201ENST00000275954 WDR33Q9C0J8 1336 aaKnown RBP17.13■□□□□ 0.33
TMEM47-201ENST00000275954 CPLX2Q6PUV4 134 aaKnown RBP17.12■□□□□ 0.33
TMEM47-201ENST00000275954 VPS37DQ86XT2 251 aa17.12■□□□□ 0.33
TMEM47-201ENST00000275954 PANK2Q9BZ23 570 aa17.12■□□□□ 0.33
TMEM47-201ENST00000275954 ABCA9Q8IUA7 1624 aa17.12■□□□□ 0.33
TMEM47-201ENST00000275954 TCEANC2Q96MN5 208 aa17.12■□□□□ 0.33
TMEM47-201ENST00000275954 DTNBO60941 627 aa17.12■□□□□ 0.33
TMEM47-201ENST00000275954 UBE3BQ7Z3V4 1068 aa17.12■□□□□ 0.33
TMEM47-201ENST00000275954 INSRP06213 1382 aa17.12■□□□□ 0.33
TMEM47-201ENST00000275954 FLT4P35916 1363 aa17.12■□□□□ 0.33
TMEM47-201ENST00000275954 A0A087WZG4 1122 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 CHL1O00533 1208 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 BAG4O95429 457 aaKnown RBP17.11■□□□□ 0.33
TMEM47-201ENST00000275954 ATP2B1P20020 1258 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 KIF6Q6ZMV9 814 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 CNNM1Q9NRU3 951 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 FAM13BQ9NYF5 915 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 USP21Q9UK80 565 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 RAB11FIP3O75154 756 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 CWF19L2Q2TBE0 894 aaKnown RBP17.11■□□□□ 0.33
TMEM47-201ENST00000275954 TRPM2O94759 1503 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 RAD21O60216 631 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 IL2RBP14784 551 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 RASSF8Q8NHQ8 419 aa17.11■□□□□ 0.33
TMEM47-201ENST00000275954 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
TMEM47-201ENST00000275954 HSP90AA2PQ14568 343 aaPredicted RBP17.1■□□□□ 0.33
TMEM47-201ENST00000275954 CCDC57Q2TAC2 916 aa17.1■□□□□ 0.33
TMEM47-201ENST00000275954 SAMD1Q6SPF0 538 aaPredicted RBP17.1■□□□□ 0.33
TMEM47-201ENST00000275954 HIP1O00291 1037 aa17.1■□□□□ 0.33
TMEM47-201ENST00000275954 PRIM1P49642 420 aaKnown RBP17.1■□□□□ 0.33
TMEM47-201ENST00000275954 SYNE3Q6ZMZ3 975 aa17.1■□□□□ 0.33
TMEM47-201ENST00000275954 ZFYVE9O95405 1425 aa17.1■□□□□ 0.33
TMEM47-201ENST00000275954 CEP126Q9P2H0 1117 aa17.1■□□□□ 0.33
TMEM47-201ENST00000275954 SASS6Q6UVJ0 657 aa17.09■□□□□ 0.33
TMEM47-201ENST00000275954 IP6K1Q92551 441 aa17.09■□□□□ 0.33
TMEM47-201ENST00000275954 RBM27Q9P2N5 1060 aaKnown RBP17.09■□□□□ 0.33
TMEM47-201ENST00000275954 A2ML1A8K2U0 1454 aa17.09■□□□□ 0.33
TMEM47-201ENST00000275954 ZGPATQ8N5A5 531 aaKnown RBP17.09■□□□□ 0.33
TMEM47-201ENST00000275954 ZNF592Q92610 1267 aa17.09■□□□□ 0.33
TMEM47-201ENST00000275954 TSPY26PQ9H489 355 aa17.09■□□□□ 0.33
TMEM47-201ENST00000275954 ATP8B2P98198 1209 aa17.09■□□□□ 0.33
TMEM47-201ENST00000275954 RRP12Q5JTH9 1297 aaKnown RBP17.09■□□□□ 0.33
TMEM47-201ENST00000275954 SDF4Q9BRK5 362 aa17.09■□□□□ 0.33
TMEM47-201ENST00000275954 ECHDC1Q9NTX5 307 aa17.09■□□□□ 0.33
TMEM47-201ENST00000275954 KIAA0232Q92628 1395 aa17.09■□□□□ 0.33
TMEM47-201ENST00000275954 PIK3R4Q99570 1358 aa17.08■□□□□ 0.33
TMEM47-201ENST00000275954 ESPNB1AK53 854 aa17.08■□□□□ 0.32
TMEM47-201ENST00000275954 COPS6Q7L5N1 327 aa17.08■□□□□ 0.32
TMEM47-201ENST00000275954 SPC24Q8NBT2 197 aa17.08■□□□□ 0.32
TMEM47-201ENST00000275954 TMX3Q96JJ7 454 aa17.08■□□□□ 0.32
TMEM47-201ENST00000275954 FMNL2Q96PY5 1086 aa17.08■□□□□ 0.32
TMEM47-201ENST00000275954 EDC4Q6P2E9 1401 aaKnown RBP17.08■□□□□ 0.32
TMEM47-201ENST00000275954 KCNQ3O43525 872 aa17.08■□□□□ 0.32
TMEM47-201ENST00000275954 PDCP20941 246 aa17.08■□□□□ 0.32
TMEM47-201ENST00000275954 AKAP17AQ02040 695 aaKnown RBP17.08■□□□□ 0.32
TMEM47-201ENST00000275954 CCDC73Q6ZRK6 1079 aa17.08■□□□□ 0.32
TMEM47-201ENST00000275954 PLEKHG1Q9ULL1 1385 aa17.07■□□□□ 0.32
TMEM47-201ENST00000275954 DIP2BQ9P265 1576 aa17.07■□□□□ 0.32
TMEM47-201ENST00000275954 TTC39AQ5SRH9 613 aa17.07■□□□□ 0.32
TMEM47-201ENST00000275954 PLEKHG3A1L390 1219 aa17.07■□□□□ 0.32
TMEM47-201ENST00000275954 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
TMEM47-201ENST00000275954 HYPKQ9NX55 129 aa17.07■□□□□ 0.32
TMEM47-201ENST00000275954 MTMR7Q9Y216 660 aa17.07■□□□□ 0.32
TMEM47-201ENST00000275954 CFAP74Q9C0B2 1584 aa17.07■□□□□ 0.32
TMEM47-201ENST00000275954 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
TMEM47-201ENST00000275954 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
TMEM47-201ENST00000275954 TPM4P67936 248 aa17.06■□□□□ 0.32
TMEM47-201ENST00000275954 TRIM29Q14134 588 aa17.06■□□□□ 0.32
TMEM47-201ENST00000275954 SNRKQ9NRH2 765 aa17.06■□□□□ 0.32
TMEM47-201ENST00000275954 STARD3NLO95772 234 aa17.06■□□□□ 0.32
TMEM47-201ENST00000275954 ESYT1Q9BSJ8 1104 aa17.06■□□□□ 0.32
TMEM47-201ENST00000275954 PNMA6EA0A0J9YXQ4 647 aa17.06■□□□□ 0.32
TMEM47-201ENST00000275954 AXIN2Q9Y2T1 843 aa17.06■□□□□ 0.32
TMEM47-201ENST00000275954 CDK11BP21127 795 aaKnown RBP17.05■□□□□ 0.32
TMEM47-201ENST00000275954 XRCC6P12956 609 aaKnown RBP eCLIP17.05■□□□□ 0.32
TMEM47-201ENST00000275954 KDM5AP29375 1690 aaKnown RBP17.05■□□□□ 0.32
TMEM47-201ENST00000275954 CCDC173Q0VFZ6 552 aa17.04■□□□□ 0.32
TMEM47-201ENST00000275954 KRT85P78386 507 aa17.04■□□□□ 0.32
TMEM47-201ENST00000275954 ANKRD13DQ6ZTN6 518 aa17.04■□□□□ 0.32
TMEM47-201ENST00000275954 NECAB1Q8N987 351 aa17.03■□□□□ 0.32
TMEM47-201ENST00000275954 TRIM5Q9C035 493 aa17.03■□□□□ 0.32
TMEM47-201ENST00000275954 CAMK4Q16566 473 aa17.03■□□□□ 0.32
TMEM47-201ENST00000275954 NLRP1Q9C000 1473 aa17.03■□□□□ 0.32
TMEM47-201ENST00000275954 IDH1O75874 414 aaKnown RBP17.03■□□□□ 0.32
TMEM47-201ENST00000275954 TFIP11Q9UBB9 837 aaKnown RBP17.03■□□□□ 0.32
TMEM47-201ENST00000275954 USP26Q9BXU7 913 aa17.02■□□□□ 0.32
TMEM47-201ENST00000275954 LIMCH1Q9UPQ0 1083 aa17.02■□□□□ 0.32
TMEM47-201ENST00000275954 PES1O00541 588 aaKnown RBP17.02■□□□□ 0.32
TMEM47-201ENST00000275954 A1BGP04217 495 aa17.02■□□□□ 0.32
TMEM47-201ENST00000275954 CPA1P15085 419 aa17.02■□□□□ 0.32
TMEM47-201ENST00000275954 DIP2CQ9Y2E4 1556 aa17.02■□□□□ 0.32
TMEM47-201ENST00000275954 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.31
TMEM47-201ENST00000275954 GUCY1B3Q02153 619 aa17.02■□□□□ 0.31
TMEM47-201ENST00000275954 AKAP4Q5JQC9 854 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms