RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 C1orf115Q9H7X2 142 aa18.89■□□□□ 0.62
CTDSP1-201ENST00000273062 RSPH14Q9UHP6 348 aa18.89■□□□□ 0.62
CTDSP1-201ENST00000273062 KDM4AO75164 1064 aa18.89■□□□□ 0.61
CTDSP1-201ENST00000273062 AATKQ6ZMQ8 1374 aa18.89■□□□□ 0.61
CTDSP1-201ENST00000273062 ARHGAP23Q9P227 1491 aa18.89■□□□□ 0.61
CTDSP1-201ENST00000273062 SLIT1O75093 1534 aa18.89■□□□□ 0.61
CTDSP1-201ENST00000273062 CDC45O75419 566 aa18.88■□□□□ 0.61
CTDSP1-201ENST00000273062 FAM184AQ8NB25 1140 aa18.88■□□□□ 0.61
CTDSP1-201ENST00000273062 TOPAZ1Q8N9V7 1692 aa18.87■□□□□ 0.61
CTDSP1-201ENST00000273062 SYCP1Q15431 976 aa18.87■□□□□ 0.61
CTDSP1-201ENST00000273062 NFE2L2Q16236 605 aa18.87■□□□□ 0.61
CTDSP1-201ENST00000273062 FAM53CQ9NYF3 392 aa18.87■□□□□ 0.61
CTDSP1-201ENST00000273062 HDAC5Q9UQL6 1122 aa18.87■□□□□ 0.61
CTDSP1-201ENST00000273062 IL16Q14005 1332 aa18.87■□□□□ 0.61
CTDSP1-201ENST00000273062 FAM83GA6ND36 823 aa18.87■□□□□ 0.61
CTDSP1-201ENST00000273062 CYP2C19P33261 490 aa18.87■□□□□ 0.61
CTDSP1-201ENST00000273062 KCNG1Q9UIX4 513 aa18.87■□□□□ 0.61
CTDSP1-201ENST00000273062 NRKQ7Z2Y5 1582 aa18.86■□□□□ 0.61
CTDSP1-201ENST00000273062 PTGS1P23219 599 aa18.86■□□□□ 0.61
CTDSP1-201ENST00000273062 GYS2P54840 703 aa18.86■□□□□ 0.61
CTDSP1-201ENST00000273062 LRMPQ12912 555 aa18.86■□□□□ 0.61
CTDSP1-201ENST00000273062 SYAP1Q96A49 352 aaPredicted RBP18.86■□□□□ 0.61
CTDSP1-201ENST00000273062 USP6P35125 1406 aa18.86■□□□□ 0.61
CTDSP1-201ENST00000273062 SMTNL1A8MU46 457 aa18.86■□□□□ 0.61
CTDSP1-201ENST00000273062 MMP14P50281 582 aa18.86■□□□□ 0.61
CTDSP1-201ENST00000273062 PLEKHG3A1L390 1219 aa18.85■□□□□ 0.61
CTDSP1-201ENST00000273062 TNNT3P45378 269 aaPredicted RBP18.85■□□□□ 0.61
CTDSP1-201ENST00000273062 FBXO38Q6PIJ6 1188 aa18.85■□□□□ 0.61
CTDSP1-201ENST00000273062 THEMISQ8N1K5 641 aaPredicted RBP18.85■□□□□ 0.61
CTDSP1-201ENST00000273062 BRD1O95696 1058 aa18.85■□□□□ 0.61
CTDSP1-201ENST00000273062 DCTN1Q14203 1278 aa18.85■□□□□ 0.61
CTDSP1-201ENST00000273062 TSPYL1Q9H0U9 437 aa18.85■□□□□ 0.61
CTDSP1-201ENST00000273062 TBX22Q9Y458 520 aa18.85■□□□□ 0.61
CTDSP1-201ENST00000273062 NOP2P46087 812 aaKnown RBP18.84■□□□□ 0.61
CTDSP1-201ENST00000273062 USP48Q86UV5 1035 aa18.84■□□□□ 0.61
CTDSP1-201ENST00000273062 EIF4A2Q14240 407 aaKnown RBP18.84■□□□□ 0.61
CTDSP1-201ENST00000273062 RTF1Q92541 710 aaKnown RBP18.84■□□□□ 0.61
CTDSP1-201ENST00000273062 GEMIN8Q9NWZ8 242 aaKnown RBP18.84■□□□□ 0.61
CTDSP1-201ENST00000273062 ELL2O00472 640 aaPredicted RBP18.83■□□□□ 0.61
CTDSP1-201ENST00000273062 PHF14O94880 888 aa18.83■□□□□ 0.61
CTDSP1-201ENST00000273062 TNNT1P13805 278 aa18.83■□□□□ 0.61
CTDSP1-201ENST00000273062 KCNA6P17658 529 aa18.83■□□□□ 0.61
CTDSP1-201ENST00000273062 HSP90AB2PQ58FF8 381 aa18.83■□□□□ 0.61
CTDSP1-201ENST00000273062 TSPYL6Q8N831 410 aa18.83■□□□□ 0.61
CTDSP1-201ENST00000273062 RBM33Q96EV2 1170 aaKnown RBP18.83■□□□□ 0.61
CTDSP1-201ENST00000273062 ZNF446Q9NWS9 450 aa18.83■□□□□ 0.61
CTDSP1-201ENST00000273062 OVOS2A0A0J9YW53 1432 aa18.83■□□□□ 0.61
CTDSP1-201ENST00000273062 OVOS2Q6IE36 1432 aa18.83■□□□□ 0.61
CTDSP1-201ENST00000273062 TRIM66O15016 1216 aa18.83■□□□□ 0.6
CTDSP1-201ENST00000273062 CT47B1P0C2W7 299 aaPredicted RBP18.83■□□□□ 0.6
CTDSP1-201ENST00000273062 EP400NLQ6ZTU2 488 aa18.82■□□□□ 0.6
CTDSP1-201ENST00000273062 NEK11Q8NG66 645 aa18.82■□□□□ 0.6
CTDSP1-201ENST00000273062 YY1AP1Q9H869 796 aa18.82■□□□□ 0.6
CTDSP1-201ENST00000273062 ST18O60284 1047 aa18.82■□□□□ 0.6
CTDSP1-201ENST00000273062 CCDC112Q8NEF3 446 aa18.82■□□□□ 0.6
CTDSP1-201ENST00000273062 ZNF397Q8NF99 534 aaPredicted RBP18.82■□□□□ 0.6
CTDSP1-201ENST00000273062 GTF3C6Q969F1 213 aa18.82■□□□□ 0.6
CTDSP1-201ENST00000273062 RGPD8O14715 1765 aaPredicted RBP18.81■□□□□ 0.6
CTDSP1-201ENST00000273062 NOL8Q76FK4 1167 aaKnown RBP18.81■□□□□ 0.6
CTDSP1-201ENST00000273062 EFCC1Q9HA90 598 aa18.81■□□□□ 0.6
CTDSP1-201ENST00000273062 ZNF215Q9UL58 517 aaPredicted RBP18.81■□□□□ 0.6
CTDSP1-201ENST00000273062 DHX16O60231 1041 aaKnown RBP18.81■□□□□ 0.6
CTDSP1-201ENST00000273062 SULT6B1Q6IMI4 303 aa18.81■□□□□ 0.6
CTDSP1-201ENST00000273062 NOL10Q9BSC4 688 aaKnown RBP18.81■□□□□ 0.6
CTDSP1-201ENST00000273062 IFT57Q9NWB7 429 aa18.81■□□□□ 0.6
CTDSP1-201ENST00000273062 LCMT1Q9UIC8 334 aa18.81■□□□□ 0.6
CTDSP1-201ENST00000273062 PEAK1Q9H792 1746 aa18.8■□□□□ 0.6
CTDSP1-201ENST00000273062 DIP2AQ14689 1571 aa18.8■□□□□ 0.6
CTDSP1-201ENST00000273062 ZNF592Q92610 1267 aa18.8■□□□□ 0.6
CTDSP1-201ENST00000273062 MBIPQ9NS73 344 aa18.8■□□□□ 0.6
CTDSP1-201ENST00000273062 PTCH1Q13635 1447 aa18.8■□□□□ 0.6
CTDSP1-201ENST00000273062 ELF2Q15723 593 aa18.8■□□□□ 0.6
CTDSP1-201ENST00000273062 TMX3Q96JJ7 454 aa18.8■□□□□ 0.6
CTDSP1-201ENST00000273062 GIMAP6Q6P9H5 292 aa18.79■□□□□ 0.6
CTDSP1-201ENST00000273062 SSH2Q76I76 1423 aa18.79■□□□□ 0.6
CTDSP1-201ENST00000273062 NUTM2GQ5VZR2 741 aa18.79■□□□□ 0.6
CTDSP1-201ENST00000273062 SYT10Q6XYQ8 523 aa18.79■□□□□ 0.6
CTDSP1-201ENST00000273062 SIRT2Q8IXJ6 389 aa18.79■□□□□ 0.6
CTDSP1-201ENST00000273062 NGDNQ8NEJ9 315 aaKnown RBP18.79■□□□□ 0.6
CTDSP1-201ENST00000273062 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.79■□□□□ 0.6
CTDSP1-201ENST00000273062 NPHP1O15259 732 aa18.78■□□□□ 0.6
CTDSP1-201ENST00000273062 CCDC183Q5T5S1 534 aa18.78■□□□□ 0.6
CTDSP1-201ENST00000273062 KIF1BPQ96EK5 621 aa18.78■□□□□ 0.6
CTDSP1-201ENST00000273062 ERBB3P21860 1342 aa18.78■□□□□ 0.6
CTDSP1-201ENST00000273062 DLG5Q8TDM6 1919 aa18.78■□□□□ 0.6
CTDSP1-201ENST00000273062 NRBP1Q9UHY1 535 aa18.78■□□□□ 0.6
CTDSP1-201ENST00000273062 C10orf67Q8IYJ2 551 aa18.77■□□□□ 0.6
CTDSP1-201ENST00000273062 RASSF4Q9H2L5 321 aa18.77■□□□□ 0.6
CTDSP1-201ENST00000273062 CEP170BQ9Y4F5 1589 aaPredicted RBP18.76■□□□□ 0.59
CTDSP1-201ENST00000273062 VAMP4O75379 141 aa18.76■□□□□ 0.59
CTDSP1-201ENST00000273062 GTF2A1P52655 376 aaPredicted RBP18.76■□□□□ 0.59
CTDSP1-201ENST00000273062 CCDC186Q7Z3E2 898 aa18.76■□□□□ 0.59
CTDSP1-201ENST00000273062 C16orf71Q8IYS4 520 aaPredicted RBP18.76■□□□□ 0.59
CTDSP1-201ENST00000273062 MAP3K19Q56UN5 1328 aa18.76■□□□□ 0.59
CTDSP1-201ENST00000273062 RIMS1Q86UR5 1692 aaKnown RBP18.76■□□□□ 0.59
CTDSP1-201ENST00000273062 ZNF853P0CG23 659 aa18.75■□□□□ 0.59
CTDSP1-201ENST00000273062 FUCA2Q9BTY2 467 aa18.75■□□□□ 0.59
CTDSP1-201ENST00000273062 XRN1Q8IZH2 1706 aaKnown RBP18.75■□□□□ 0.59
CTDSP1-201ENST00000273062 PLEKHM2Q8IWE5 1019 aa18.75■□□□□ 0.59
CTDSP1-201ENST00000273062 C8orf58Q8NAV2 365 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms