RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 SEPT11Q9NVA2 429 aaKnown RBP16.24■□□□□ 0.19
PTPN23-201ENST00000265562 HDAC1Q13547 482 aaPredicted RBP16.24■□□□□ 0.19
PTPN23-201ENST00000265562 EZRP15311 586 aaKnown RBP16.24■□□□□ 0.19
PTPN23-201ENST00000265562 PAFAH1B1P43034 410 aa16.24■□□□□ 0.19
PTPN23-201ENST00000265562 GUCY1B3Q02153 619 aa16.24■□□□□ 0.19
PTPN23-201ENST00000265562 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
PTPN23-201ENST00000265562 MAP3K1Q13233 1512 aa16.24■□□□□ 0.19
PTPN23-201ENST00000265562 CTR9Q6PD62 1173 aa16.24■□□□□ 0.19
PTPN23-201ENST00000265562 TXNDC2Q86VQ3 553 aa16.24■□□□□ 0.19
PTPN23-201ENST00000265562 CPLX3Q8WVH0 158 aa16.24■□□□□ 0.19
PTPN23-201ENST00000265562 TMX3Q96JJ7 454 aa16.24■□□□□ 0.19
PTPN23-201ENST00000265562 FKBP15Q5T1M5 1219 aa16.23■□□□□ 0.19
PTPN23-201ENST00000265562 LUZP1Q86V48 1076 aa16.23■□□□□ 0.19
PTPN23-201ENST00000265562 RTEL1-TNFRSF6BF6WH68 1400 aa16.23■□□□□ 0.19
PTPN23-201ENST00000265562 YEATS4O95619 227 aa16.23■□□□□ 0.19
PTPN23-201ENST00000265562 SSBP05455 408 aaKnown RBP eCLIP16.23■□□□□ 0.192e-8■■■■■ 33.2
PTPN23-201ENST00000265562 NUCB1Q02818 461 aa16.23■□□□□ 0.19
PTPN23-201ENST00000265562 CNNM3Q8NE01 707 aa16.23■□□□□ 0.19
PTPN23-201ENST00000265562 IPO4Q8TEX9 1081 aaKnown RBP16.23■□□□□ 0.19
PTPN23-201ENST00000265562 NUP88Q99567 741 aaPredicted RBP16.23■□□□□ 0.19
PTPN23-201ENST00000265562 BOLA2Q9H3K6 86 aa16.23■□□□□ 0.19
PTPN23-201ENST00000265562 GBP2P32456 591 aaPredicted RBP16.22■□□□□ 0.19
PTPN23-201ENST00000265562 ZSCAN22P10073 491 aaPredicted RBP16.22■□□□□ 0.19
PTPN23-201ENST00000265562 CC2D2AQ9P2K1 1620 aa16.22■□□□□ 0.19
PTPN23-201ENST00000265562 BTBD11A6QL63 1104 aa16.22■□□□□ 0.19
PTPN23-201ENST00000265562 USO1O60763 962 aaKnown RBP16.22■□□□□ 0.19
PTPN23-201ENST00000265562 TATP17735 454 aaPredicted RBP16.22■□□□□ 0.19
PTPN23-201ENST00000265562 GNG11P61952 73 aa16.22■□□□□ 0.19
PTPN23-201ENST00000265562 MIS18AQ9NYP9 233 aa16.22■□□□□ 0.19
PTPN23-201ENST00000265562 BIN1O00499 593 aa16.22■□□□□ 0.19
PTPN23-201ENST00000265562 MCM10Q7L590 875 aa16.22■□□□□ 0.19
PTPN23-201ENST00000265562 RPGRIP1LQ68CZ1 1315 aa16.22■□□□□ 0.19
PTPN23-201ENST00000265562 CCDC186Q7Z3E2 898 aa16.22■□□□□ 0.19
PTPN23-201ENST00000265562 HECW1Q76N89 1606 aa16.21■□□□□ 0.19
PTPN23-201ENST00000265562 SKILP12757 684 aa16.21■□□□□ 0.19
PTPN23-201ENST00000265562 IFFO1Q0D2I5 559 aa16.21■□□□□ 0.19
PTPN23-201ENST00000265562 FAM200AQ8TCP9 573 aa16.21■□□□□ 0.19
PTPN23-201ENST00000265562 SPG7Q9UQ90 795 aa16.21■□□□□ 0.19
PTPN23-201ENST00000265562 PRIM1P49642 420 aaKnown RBP16.21■□□□□ 0.18
PTPN23-201ENST00000265562 CCDC113Q9H0I3 377 aa16.21■□□□□ 0.18
PTPN23-201ENST00000265562 GNAT3A8MTJ3 354 aa16.2■□□□□ 0.18
PTPN23-201ENST00000265562 CCDC12Q8WUD4 166 aaPredicted RBP16.2■□□□□ 0.18
PTPN23-201ENST00000265562 TICAM2Q86XR7 235 aa16.2■□□□□ 0.18
PTPN23-201ENST00000265562 DNMBPQ6XZF7 1577 aa16.2■□□□□ 0.18
PTPN23-201ENST00000265562 TTC12Q9H892 705 aaPredicted RBP16.2■□□□□ 0.18
PTPN23-201ENST00000265562 USP48Q86UV5 1035 aa16.2■□□□□ 0.18
PTPN23-201ENST00000265562 BBXQ8WY36 941 aaPredicted RBP16.2■□□□□ 0.18
PTPN23-201ENST00000265562 ARFGAP3Q9NP61 516 aa16.2■□□□□ 0.18
PTPN23-201ENST00000265562 IVLP07476 585 aa16.19■□□□□ 0.18
PTPN23-201ENST00000265562 RAB3GAP1Q15042 981 aa16.19■□□□□ 0.18
PTPN23-201ENST00000265562 AIDAQ96BJ3 306 aa16.19■□□□□ 0.18
PTPN23-201ENST00000265562 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
PTPN23-201ENST00000265562 PHAXQ9H814 394 aaKnown RBP16.19■□□□□ 0.18
PTPN23-201ENST00000265562 MNAT1P51948 309 aa16.19■□□□□ 0.18
PTPN23-201ENST00000265562 CABP4P57796 275 aa16.19■□□□□ 0.18
PTPN23-201ENST00000265562 CACNA2D4Q7Z3S7 1137 aa16.19■□□□□ 0.18
PTPN23-201ENST00000265562 PCDHB15Q9Y5E8 787 aa16.19■□□□□ 0.18
PTPN23-201ENST00000265562 F6X3S4 739 aa16.19■□□□□ 0.18
PTPN23-201ENST00000265562 IDH1O75874 414 aaKnown RBP16.19■□□□□ 0.18
PTPN23-201ENST00000265562 DNAAF4Q8WXU2 420 aa16.19■□□□□ 0.18
PTPN23-201ENST00000265562 PTPRCP08575 1304 aa16.19■□□□□ 0.18
PTPN23-201ENST00000265562 ZSWIM4Q9H7M6 989 aa16.18■□□□□ 0.18
PTPN23-201ENST00000265562 GOLGA6L10A0A0M3HER8 536 aa16.18■□□□□ 0.18
PTPN23-201ENST00000265562 GTF2A1P52655 376 aaPredicted RBP16.18■□□□□ 0.18
PTPN23-201ENST00000265562 CNPY2Q9Y2B0 182 aa16.18■□□□□ 0.18
PTPN23-201ENST00000265562 SNAPC4Q5SXM2 1469 aa16.18■□□□□ 0.18
PTPN23-201ENST00000265562 CCDC196A0A1B0GTZ2 297 aa16.18■□□□□ 0.18
PTPN23-201ENST00000265562 ANO6Q4KMQ2 910 aa16.18■□□□□ 0.18
PTPN23-201ENST00000265562 SMC5Q8IY18 1101 aa16.18■□□□□ 0.18
PTPN23-201ENST00000265562 EVI5LQ96CN4 794 aa16.18■□□□□ 0.18
PTPN23-201ENST00000265562 MPHOSPH8Q99549 860 aa16.18■□□□□ 0.18
PTPN23-201ENST00000265562 BCCIPQ9P287 314 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTPN23-201ENST00000265562 CCDC178Q5BJE1 867 aa16.18■□□□□ 0.18
PTPN23-201ENST00000265562 NAA15Q9BXJ9 866 aaKnown RBP16.18■□□□□ 0.18
PTPN23-201ENST00000265562 SLU7O95391 586 aaKnown RBP16.17■□□□□ 0.18
PTPN23-201ENST00000265562 SMC1AQ14683 1233 aaKnown RBP16.17■□□□□ 0.18
PTPN23-201ENST00000265562 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.17■□□□□ 0.18
PTPN23-201ENST00000265562 CCDC175P0C221 793 aa16.17■□□□□ 0.18
PTPN23-201ENST00000265562 CCT2P78371 535 aaKnown RBP16.17■□□□□ 0.18
PTPN23-201ENST00000265562 ATF3P18847 181 aa16.17■□□□□ 0.18
PTPN23-201ENST00000265562 ZFP91Q96JP5 570 aaPredicted RBP16.17■□□□□ 0.18
PTPN23-201ENST00000265562 ZSCAN16Q9H4T2 348 aaPredicted RBP16.17■□□□□ 0.18
PTPN23-201ENST00000265562 PIBF1Q8WXW3 757 aa16.16■□□□□ 0.18
PTPN23-201ENST00000265562 ALS2CR12Q96Q35 445 aa16.16■□□□□ 0.18
PTPN23-201ENST00000265562 SLC52A1Q9NWF4 448 aa16.16■□□□□ 0.18
PTPN23-201ENST00000265562 DNAI1Q9UI46 699 aa16.16■□□□□ 0.18
PTPN23-201ENST00000265562 TUBB4AP04350 444 aa16.16■□□□□ 0.18
PTPN23-201ENST00000265562 ATP2B2Q01814 1243 aa16.16■□□□□ 0.18
PTPN23-201ENST00000265562 ESCO1Q5FWF5 840 aa16.16■□□□□ 0.18
PTPN23-201ENST00000265562 SMAP1Q8IYB5 467 aaPredicted RBP16.16■□□□□ 0.18
PTPN23-201ENST00000265562 CCDC8Q9H0W5 538 aaPredicted RBP16.16■□□□□ 0.18
PTPN23-201ENST00000265562 ECHDC1Q9NTX5 307 aa16.16■□□□□ 0.18
PTPN23-201ENST00000265562 TMEM132AQ24JP5 1023 aa16.16■□□□□ 0.18
PTPN23-201ENST00000265562 SPECC1Q5M775 1068 aa16.16■□□□□ 0.18
PTPN23-201ENST00000265562 GCOM1H8Y6P7 765 aaPredicted RBP16.15■□□□□ 0.18
PTPN23-201ENST00000265562 MYZAPP0CAP1 466 aa16.15■□□□□ 0.18
PTPN23-201ENST00000265562 SDSP20132 328 aa16.15■□□□□ 0.18
PTPN23-201ENST00000265562 RBM25P49756 843 aaKnown RBP16.15■□□□□ 0.18
PTPN23-201ENST00000265562 VPS36Q86VN1 386 aa16.15■□□□□ 0.18
PTPN23-201ENST00000265562 RRAGDQ9NQL2 400 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms