RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 TAF1LQ8IZX4 1826 aa21.5■■□□□ 1.03
CHCHD3-201ENST00000262570 AKT1S1Q96B36 256 aa21.5■■□□□ 1.03
CHCHD3-201ENST00000262570 ANO8Q9HCE9 1232 aaPredicted RBP21.5■■□□□ 1.03
CHCHD3-201ENST00000262570 SOS1Q07889 1333 aaPredicted RBP21.5■■□□□ 1.03
CHCHD3-201ENST00000262570 C5P01031 1676 aa21.5■■□□□ 1.03
CHCHD3-201ENST00000262570 NUP188Q5SRE5 1749 aa21.5■■□□□ 1.03
CHCHD3-201ENST00000262570 TWISTNBQ3B726 338 aaPredicted RBP21.49■■□□□ 1.03
CHCHD3-201ENST00000262570 INTS5Q6P9B9 1019 aaKnown RBP21.49■■□□□ 1.03
CHCHD3-201ENST00000262570 COL5A3P25940 1745 aaPredicted RBP21.49■■□□□ 1.03
CHCHD3-201ENST00000262570 EIF2S2P20042 333 aaKnown RBP21.48■■□□□ 1.03
CHCHD3-201ENST00000262570 ZNF827Q17R98 1081 aa21.48■■□□□ 1.03
CHCHD3-201ENST00000262570 CCDC87Q9NVE4 849 aa21.48■■□□□ 1.03
CHCHD3-201ENST00000262570 C4BP0C0L5 1744 aa21.48■■□□□ 1.03
CHCHD3-201ENST00000262570 A1BGP04217 495 aa21.48■■□□□ 1.03
CHCHD3-201ENST00000262570 NBPF14Q5TI25 921 aa21.48■■□□□ 1.03
CHCHD3-201ENST00000262570 VAMP4O75379 141 aa21.47■■□□□ 1.03
CHCHD3-201ENST00000262570 SLC15A2Q16348 729 aa21.47■■□□□ 1.03
CHCHD3-201ENST00000262570 AK7Q96M32 723 aa21.47■■□□□ 1.03
CHCHD3-201ENST00000262570 ZBTB1Q9Y2K1 713 aa21.47■■□□□ 1.03
CHCHD3-201ENST00000262570 HDGFL1Q5TGJ6 251 aa21.46■■□□□ 1.03
CHCHD3-201ENST00000262570 STK32BQ9NY57 414 aa21.46■■□□□ 1.03
CHCHD3-201ENST00000262570 MYH14Q7Z406 1995 aaKnown RBP21.45■■□□□ 1.02
CHCHD3-201ENST00000262570 GNPATO15228 680 aa21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 RPS6KA4O75676 772 aa21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 NECTIN2Q92692 538 aa21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 CHMP4AQ9BY43 222 aa21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 TFCP2L1Q9NZI6 479 aa21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 LAMB4A4D0S4 1761 aa21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 ERBB4Q15303 1308 aa21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 NBPF26B4DH59 902 aa21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 CANXP27824 592 aaKnown RBP21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 PDIA6Q15084 440 aa21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 NBPF10Q6P3W6 841 aaKnown RBP21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 AMIGO3Q86WK7 504 aa21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 NBPF15Q8N660 670 aa21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 RTCBQ9Y3I0 505 aaKnown RBP21.44■■□□□ 1.02
CHCHD3-201ENST00000262570 PIP4K2AP48426 406 aaPredicted RBP21.43■■□□□ 1.02
CHCHD3-201ENST00000262570 IL6STP40189 918 aaPredicted RBP21.42■■□□□ 1.02
CHCHD3-201ENST00000262570 EIF5P55010 431 aaKnown RBP21.42■■□□□ 1.02
CHCHD3-201ENST00000262570 CCDC30Q5VVM6 783 aa21.42■■□□□ 1.02
CHCHD3-201ENST00000262570 CT47B1P0C2W7 299 aaPredicted RBP21.41■■□□□ 1.02
CHCHD3-201ENST00000262570 SSFA2P28290 1259 aa21.41■■□□□ 1.02
CHCHD3-201ENST00000262570 SMIM5Q71RC9 77 aa21.41■■□□□ 1.02
CHCHD3-201ENST00000262570 DDX21Q9NR30 783 aaKnown RBP eCLIP21.4■■□□□ 1.02
CHCHD3-201ENST00000262570 CHPF2Q9P2E5 772 aa21.4■■□□□ 1.02
CHCHD3-201ENST00000262570 DBF4Q9UBU7 674 aaPredicted RBP21.4■■□□□ 1.02
CHCHD3-201ENST00000262570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.4■■□□□ 1.02
CHCHD3-201ENST00000262570 PROSER3Q2NL68 480 aa21.4■■□□□ 1.02
CHCHD3-201ENST00000262570 LRP10Q7Z4F1 713 aa21.4■■□□□ 1.02
CHCHD3-201ENST00000262570 MYL6BP14649 208 aa21.39■■□□□ 1.01
CHCHD3-201ENST00000262570 ADRA2BP18089 450 aa21.39■■□□□ 1.01
CHCHD3-201ENST00000262570 TRAPPC3LQ5T215 181 aa21.39■■□□□ 1.01
CHCHD3-201ENST00000262570 FLAD1Q8NFF5 587 aa21.39■■□□□ 1.01
CHCHD3-201ENST00000262570 ZNF428Q96B54 188 aa21.39■■□□□ 1.01
CHCHD3-201ENST00000262570 PNPLA7Q6ZV29 1317 aa21.38■■□□□ 1.01
CHCHD3-201ENST00000262570 UBR3Q6ZT12 1888 aa21.38■■□□□ 1.01
CHCHD3-201ENST00000262570 PHF14O94880 888 aa21.38■■□□□ 1.01
CHCHD3-201ENST00000262570 ANXA1P04083 346 aa21.38■■□□□ 1.01
CHCHD3-201ENST00000262570 R3HDM1Q15032 1099 aaKnown RBP21.37■■□□□ 1.01
CHCHD3-201ENST00000262570 ARHGEF1Q92888 912 aaKnown RBP21.37■■□□□ 1.01
CHCHD3-201ENST00000262570 COL15A1P39059 1388 aa21.37■■□□□ 1.01
CHCHD3-201ENST00000262570 TCERG1O14776 1098 aaKnown RBP21.36■■□□□ 1.01
CHCHD3-201ENST00000262570 COL23A1Q86Y22 540 aaPredicted RBP21.36■■□□□ 1.01
CHCHD3-201ENST00000262570 STK31Q9BXU1 1019 aa21.36■■□□□ 1.01
CHCHD3-201ENST00000262570 ZNF330Q9Y3S2 320 aaPredicted RBP21.36■■□□□ 1.01
CHCHD3-201ENST00000262570 NPM2Q86SE8 214 aaKnown RBP21.36■■□□□ 1.01
CHCHD3-201ENST00000262570 HYPKQ9NX55 129 aa21.36■■□□□ 1.01
CHCHD3-201ENST00000262570 A0A087WZG4 1122 aa21.35■■□□□ 1.01
CHCHD3-201ENST00000262570 SLC4A2P04920 1241 aa21.35■■□□□ 1.01
CHCHD3-201ENST00000262570 TUBGCP6Q96RT7 1819 aa21.34■■□□□ 1.01
CHCHD3-201ENST00000262570 PSDA5PKW4 1024 aaPredicted RBP21.33■■□□□ 1.01
CHCHD3-201ENST00000262570 RFC4P35249 363 aa21.33■■□□□ 1.01
CHCHD3-201ENST00000262570 QSER1Q2KHR3 1735 aa21.33■■□□□ 1.01
CHCHD3-201ENST00000262570 ALDH1L2Q3SY69 923 aa21.33■■□□□ 1.01
CHCHD3-201ENST00000262570 SSH1Q8WYL5 1049 aa21.33■■□□□ 1.01
CHCHD3-201ENST00000262570 PDGFDQ9GZP0 370 aaPredicted RBP21.33■■□□□ 1.01
CHCHD3-201ENST00000262570 TBC1D2BQ9UPU7 963 aa21.33■■□□□ 1.01
CHCHD3-201ENST00000262570 COPS6Q7L5N1 327 aa21.32■■□□□ 1
CHCHD3-201ENST00000262570 DZIP3Q86Y13 1208 aaKnown RBP21.32■■□□□ 1
CHCHD3-201ENST00000262570 PHAXQ9H814 394 aaKnown RBP21.32■■□□□ 1
CHCHD3-201ENST00000262570 RARSP54136 660 aaKnown RBP21.31■■□□□ 1
CHCHD3-201ENST00000262570 TTLL7Q6ZT98 887 aa21.31■■□□□ 1
CHCHD3-201ENST00000262570 XAGE3Q8WTP9 111 aa21.31■■□□□ 1
CHCHD3-201ENST00000262570 NARFQ9UHQ1 456 aa21.31■■□□□ 1
CHCHD3-201ENST00000262570 MSH5O43196 834 aa21.31■■□□□ 1
CHCHD3-201ENST00000262570 AIMP1Q12904 312 aaKnown RBP21.31■■□□□ 1
CHCHD3-201ENST00000262570 ARXQ96QS3 562 aa21.31■■□□□ 1
CHCHD3-201ENST00000262570 USP42Q9H9J4 1324 aaKnown RBP21.31■■□□□ 1
CHCHD3-201ENST00000262570 ZPR1O75312 459 aa21.3■■□□□ 1
CHCHD3-201ENST00000262570 G2E3Q7L622 706 aa21.3■■□□□ 1
CHCHD3-201ENST00000262570 MRPL50Q8N5N7 158 aaKnown RBP21.3■■□□□ 1
CHCHD3-201ENST00000262570 SRP68Q9UHB9 627 aaKnown RBP21.3■■□□□ 1
CHCHD3-201ENST00000262570 CAMTA2O94983 1202 aa21.29■■□□□ 1
CHCHD3-201ENST00000262570 SLC16A10Q8TF71 515 aa21.29■■□□□ 1
CHCHD3-201ENST00000262570 BCL2L13Q9BXK5 485 aa21.29■■□□□ 1
CHCHD3-201ENST00000262570 USPL1Q5W0Q7 1092 aa21.28■■□□□ 1
CHCHD3-201ENST00000262570 SMC4Q9NTJ3 1288 aa21.28■■□□□ 1
CHCHD3-201ENST00000262570 ERVV-1B6SEH8 477 aa21.27■■□□□ 1
CHCHD3-201ENST00000262570 GYS1P13807 737 aa21.27■■□□□ 1
CHCHD3-201ENST00000262570 BRPF1P55201 1214 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms