RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 DDR1Q08345 913 aa26.96■■□□□ 1.91
CFC1-201ENST00000259216 BTBD11A6QL63 1104 aa26.94■■□□□ 1.9
CFC1-201ENST00000259216 PELP1Q8IZL8 1130 aaKnown RBP26.94■■□□□ 1.9
CFC1-201ENST00000259216 EIF5P55010 431 aaKnown RBP26.93■■□□□ 1.9
CFC1-201ENST00000259216 FMNL2Q96PY5 1086 aa26.93■■□□□ 1.9
CFC1-201ENST00000259216 BCL2L12Q9HB09 334 aa26.93■■□□□ 1.9
CFC1-201ENST00000259216 MYBBP1AQ9BQG0 1328 aaKnown RBP26.92■■□□□ 1.9
CFC1-201ENST00000259216 STARD3NLO95772 234 aa26.92■■□□□ 1.9
CFC1-201ENST00000259216 TM4SF1P30408 202 aa26.92■■□□□ 1.9
CFC1-201ENST00000259216 RTF1Q92541 710 aaKnown RBP26.92■■□□□ 1.9
CFC1-201ENST00000259216 NARFQ9UHQ1 456 aa26.92■■□□□ 1.9
CFC1-201ENST00000259216 USPL1Q5W0Q7 1092 aa26.91■■□□□ 1.9
CFC1-201ENST00000259216 NFE2L2Q16236 605 aa26.9■■□□□ 1.9
CFC1-201ENST00000259216 TEX13AQ9BXU3 409 aaPredicted RBP26.9■■□□□ 1.9
CFC1-201ENST00000259216 POLRMTO00411 1230 aaKnown RBP26.89■■□□□ 1.9
CFC1-201ENST00000259216 GRIN3BO60391 1043 aa26.89■■□□□ 1.9
CFC1-201ENST00000259216 CANXP27824 592 aaKnown RBP26.89■■□□□ 1.9
CFC1-201ENST00000259216 PARP3Q9Y6F1 533 aa26.89■■□□□ 1.9
CFC1-201ENST00000259216 ZNF784Q8NCA9 323 aaPredicted RBP26.88■■□□□ 1.89
CFC1-201ENST00000259216 N4BP2Q86UW6 1770 aaPredicted RBP26.88■■□□□ 1.89
CFC1-201ENST00000259216 NRXN2Q9P2S2 1712 aa26.87■■□□□ 1.89
CFC1-201ENST00000259216 SCN7AQ01118 1682 aa26.87■■□□□ 1.89
CFC1-201ENST00000259216 PRAMEF22A3QJZ6 481 aa26.87■■□□□ 1.89
CFC1-201ENST00000259216 ZPR1O75312 459 aa26.87■■□□□ 1.89
CFC1-201ENST00000259216 TGFB2P61812 414 aa26.87■■□□□ 1.89
CFC1-201ENST00000259216 BRCA1P38398 1863 aaKnown RBP26.87■■□□□ 1.89
CFC1-201ENST00000259216 KDM3BQ7LBC6 1761 aa26.86■■□□□ 1.89
CFC1-201ENST00000259216 A1BGP04217 495 aa26.86■■□□□ 1.89
CFC1-201ENST00000259216 NFIXQ14938 502 aa26.86■■□□□ 1.89
CFC1-201ENST00000259216 TAF7Q15545 349 aaPredicted RBP26.86■■□□□ 1.89
CFC1-201ENST00000259216 USP16Q9Y5T5 823 aa26.86■■□□□ 1.89
CFC1-201ENST00000259216 THUMPD2Q9BTF0 503 aaKnown RBP26.85■■□□□ 1.89
CFC1-201ENST00000259216 PRKRIP1Q9H875 184 aaPredicted RBP26.85■■□□□ 1.89
CFC1-201ENST00000259216 WWC3Q9ULE0 1092 aa26.85■■□□□ 1.89
CFC1-201ENST00000259216 KCNA3P22001 575 aa26.84■■□□□ 1.89
CFC1-201ENST00000259216 IL6STP40189 918 aaPredicted RBP26.84■■□□□ 1.89
CFC1-201ENST00000259216 AFDNP55196 1824 aaKnown RBP26.83■■□□□ 1.89
CFC1-201ENST00000259216 A0A0G2JLW4 131 aa26.83■■□□□ 1.89
CFC1-201ENST00000259216 MIS18AQ9NYP9 233 aa26.83■■□□□ 1.89
CFC1-201ENST00000259216 NEFMP07197 916 aa26.82■■□□□ 1.88
CFC1-201ENST00000259216 SNRPA1P09661 255 aaKnown RBP26.82■■□□□ 1.88
CFC1-201ENST00000259216 DPEP1P16444 411 aa26.82■■□□□ 1.88
CFC1-201ENST00000259216 PNNQ9H307 717 aaKnown RBP26.82■■□□□ 1.88
CFC1-201ENST00000259216 MAPK8IP3Q9UPT6 1336 aa26.81■■□□□ 1.88
CFC1-201ENST00000259216 A0A087WZG4 1122 aa26.8■■□□□ 1.88
CFC1-201ENST00000259216 ZEB1P37275 1124 aaPredicted RBP26.8■■□□□ 1.88
CFC1-201ENST00000259216 LAMB4A4D0S4 1761 aa26.79■■□□□ 1.88
CFC1-201ENST00000259216 BCORQ6W2J9 1755 aa26.79■■□□□ 1.88
CFC1-201ENST00000259216 NBPF26B4DH59 902 aa26.78■■□□□ 1.88
CFC1-201ENST00000259216 CAMTA2O94983 1202 aa26.78■■□□□ 1.88
CFC1-201ENST00000259216 PIP4K2AP48426 406 aaPredicted RBP26.78■■□□□ 1.88
CFC1-201ENST00000259216 NBPF10Q6P3W6 841 aaKnown RBP26.78■■□□□ 1.88
CFC1-201ENST00000259216 NBPF15Q8N660 670 aa26.78■■□□□ 1.88
CFC1-201ENST00000259216 TBC1D2BQ9UPU7 963 aa26.78■■□□□ 1.88
CFC1-201ENST00000259216 ADCY9O60503 1353 aa26.77■■□□□ 1.88
CFC1-201ENST00000259216 TMPOP42166 694 aaKnown RBP26.77■■□□□ 1.88
CFC1-201ENST00000259216 TBC1D9BQ66K14 1250 aa26.76■■□□□ 1.87
CFC1-201ENST00000259216 PNISRQ8TF01 805 aaKnown RBP26.76■■□□□ 1.87
CFC1-201ENST00000259216 CARMIL3Q8ND23 1372 aa26.75■■□□□ 1.87
CFC1-201ENST00000259216 EIF4A1P60842 406 aaKnown RBP26.75■■□□□ 1.87
CFC1-201ENST00000259216 GIGYF1O75420 1035 aaPredicted RBP26.74■■□□□ 1.87
CFC1-201ENST00000259216 SERPINB2P05120 415 aa26.74■■□□□ 1.87
CFC1-201ENST00000259216 CHRNA5P30532 468 aa26.73■■□□□ 1.87
CFC1-201ENST00000259216 RIPK4P57078 832 aa26.73■■□□□ 1.87
CFC1-201ENST00000259216 ADAMTS8Q9UP79 889 aa26.73■■□□□ 1.87
CFC1-201ENST00000259216 ZNF330Q9Y3S2 320 aaPredicted RBP26.73■■□□□ 1.87
CFC1-201ENST00000259216 ARFGEF1Q9Y6D6 1849 aa26.73■■□□□ 1.87
CFC1-201ENST00000259216 CCDC146Q8IYE0 955 aa26.72■■□□□ 1.87
CFC1-201ENST00000259216 BCS1LQ9Y276 419 aa26.72■■□□□ 1.87
CFC1-201ENST00000259216 DZIP3Q86Y13 1208 aaKnown RBP26.71■■□□□ 1.87
CFC1-201ENST00000259216 ANKRD31Q8N7Z5 1873 aa26.7■■□□□ 1.87
CFC1-201ENST00000259216 BICDL1Q6ZP65 573 aa26.7■■□□□ 1.86
CFC1-201ENST00000259216 RRP7AQ9Y3A4 280 aaKnown RBP26.7■■□□□ 1.86
CFC1-201ENST00000259216 DLEC1Q9Y238 1755 aa26.7■■□□□ 1.86
CFC1-201ENST00000259216 RUNDC1Q96C34 613 aa26.69■■□□□ 1.86
CFC1-201ENST00000259216 ATP10DQ9P241 1426 aa26.68■■□□□ 1.86
CFC1-201ENST00000259216 PIM2Q9P1W9 311 aa26.68■■□□□ 1.86
CFC1-201ENST00000259216 TRIM35Q9UPQ4 493 aa26.68■■□□□ 1.86
CFC1-201ENST00000259216 WDR43Q15061 677 aaKnown RBP eCLIP26.67■■□□□ 1.86
CFC1-201ENST00000259216 RGL2O15211 777 aa26.66■■□□□ 1.86
CFC1-201ENST00000259216 PRR5LQ6MZQ0 368 aa26.66■■□□□ 1.86
CFC1-201ENST00000259216 BABAM1Q9NWV8 329 aa26.66■■□□□ 1.86
CFC1-201ENST00000259216 LMOD3Q0VAK6 560 aa26.65■■□□□ 1.86
CFC1-201ENST00000259216 CLEC4GQ6UXB4 293 aa26.65■■□□□ 1.86
CFC1-201ENST00000259216 DALRD3Q5D0E6 543 aaKnown RBP26.64■■□□□ 1.86
CFC1-201ENST00000259216 TSPYL4Q9UJ04 414 aa26.64■■□□□ 1.86
CFC1-201ENST00000259216 COL11A2P13942 1736 aaPredicted RBP26.63■■□□□ 1.85
CFC1-201ENST00000259216 CCDC184Q52MB2 194 aa26.62■■□□□ 1.85
CFC1-201ENST00000259216 LRP10Q7Z4F1 713 aa26.62■■□□□ 1.85
CFC1-201ENST00000259216 NPM2Q86SE8 214 aaKnown RBP26.62■■□□□ 1.85
CFC1-201ENST00000259216 CHL1O00533 1208 aa26.61■■□□□ 1.85
CFC1-201ENST00000259216 SETDB2Q96T68 719 aa26.61■■□□□ 1.85
CFC1-201ENST00000259216 NEUROD2Q15784 382 aa26.6■■□□□ 1.85
CFC1-201ENST00000259216 HLFQ16534 295 aa26.6■■□□□ 1.85
CFC1-201ENST00000259216 ARHGAP27Q6ZUM4 889 aa26.6■■□□□ 1.85
CFC1-201ENST00000259216 CCDC24Q8N4L8 307 aa26.6■■□□□ 1.85
CFC1-201ENST00000259216 BRIP1Q9BX63 1249 aa26.6■■□□□ 1.85
CFC1-201ENST00000259216 ZNF316A6NFI3 1004 aaPredicted RBP26.59■■□□□ 1.85
CFC1-201ENST00000259216 C2CD5Q86YS7 1000 aa26.59■■□□□ 1.85
CFC1-201ENST00000259216 ERBB4Q15303 1308 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms