RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 ZBTB12Q9Y330 459 aaPredicted RBP11.5□□□□□ -0.57
IRF1-201ENST00000245414 CLASP1Q7Z460 1538 aa11.5□□□□□ -0.57
IRF1-201ENST00000245414 GSPT1P15170 499 aaKnown RBP11.5□□□□□ -0.57
IRF1-201ENST00000245414 MCCP23508 829 aa11.5□□□□□ -0.57
IRF1-201ENST00000245414 MCM2P49736 904 aa11.5□□□□□ -0.57
IRF1-201ENST00000245414 SNW1Q13573 536 aaKnown RBP11.5□□□□□ -0.57
IRF1-201ENST00000245414 ADAM21Q9UKJ8 722 aa11.5□□□□□ -0.57
IRF1-201ENST00000245414 ABCC10Q5T3U5 1492 aa11.5□□□□□ -0.57
IRF1-201ENST00000245414 ZNF75DP51815 510 aa11.49□□□□□ -0.57
IRF1-201ENST00000245414 CDC42BPAQ5VT25 1732 aa11.49□□□□□ -0.57
IRF1-201ENST00000245414 PLEKHG2Q9H7P9 1386 aa11.49□□□□□ -0.57
IRF1-201ENST00000245414 IRF6O14896 467 aa11.49□□□□□ -0.57
IRF1-201ENST00000245414 SETQ01105 290 aaPredicted RBP11.49□□□□□ -0.57
IRF1-201ENST00000245414 MAP3K11Q16584 847 aa11.49□□□□□ -0.57
IRF1-201ENST00000245414 MORC1Q86VD1 984 aa11.49□□□□□ -0.57
IRF1-201ENST00000245414 SGSM3Q96HU1 749 aa11.49□□□□□ -0.57
IRF1-201ENST00000245414 PIK3C2GO75747 1445 aa11.49□□□□□ -0.57
IRF1-201ENST00000245414 U2AF1L5P0DN76 240 aaPredicted RBP11.49□□□□□ -0.57
IRF1-201ENST00000245414 U2AF1Q01081 240 aaKnown RBP eCLIP11.49□□□□□ -0.57
IRF1-201ENST00000245414 ANO6Q4KMQ2 910 aa11.49□□□□□ -0.57
IRF1-201ENST00000245414 UPF3BQ9BZI7 483 aaKnown RBP11.49□□□□□ -0.57
IRF1-201ENST00000245414 VPS18Q9P253 973 aa11.49□□□□□ -0.57
IRF1-201ENST00000245414 H0YHG0 523 aa11.48□□□□□ -0.57
IRF1-201ENST00000245414 SARNPP82979 210 aaKnown RBP11.48□□□□□ -0.57
IRF1-201ENST00000245414 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
IRF1-201ENST00000245414 ARID5BQ14865 1188 aa11.48□□□□□ -0.57
IRF1-201ENST00000245414 CCAR2Q8N163 923 aaKnown RBP11.48□□□□□ -0.57
IRF1-201ENST00000245414 CALR3Q96L12 384 aaKnown RBP11.48□□□□□ -0.57
IRF1-201ENST00000245414 ATP6V1DQ9Y5K8 247 aa11.48□□□□□ -0.57
IRF1-201ENST00000245414 RAD50Q92878 1312 aa11.48□□□□□ -0.57
IRF1-201ENST00000245414 TPM1P09493 284 aa11.48□□□□□ -0.57
IRF1-201ENST00000245414 TYRO3Q06418 890 aa11.48□□□□□ -0.57
IRF1-201ENST00000245414 NUP62CLQ9H1M0 184 aa11.48□□□□□ -0.57
IRF1-201ENST00000245414 ARHGEF12Q9NZN5 1544 aa11.48□□□□□ -0.57
IRF1-201ENST00000245414 EXOC4Q96A65 974 aa11.48□□□□□ -0.57
IRF1-201ENST00000245414 ERC2O15083 957 aa11.47□□□□□ -0.57
IRF1-201ENST00000245414 OS9Q13438 667 aaPredicted RBP11.47□□□□□ -0.57
IRF1-201ENST00000245414 CCDC196A0A1B0GTZ2 297 aa11.47□□□□□ -0.57
IRF1-201ENST00000245414 NBPF20Q3BBV1 942 aa11.47□□□□□ -0.57
IRF1-201ENST00000245414 CCDC144BQ3MJ40 725 aa11.47□□□□□ -0.57
IRF1-201ENST00000245414 CCDC144CPQ8IYA2 1237 aa11.47□□□□□ -0.57
IRF1-201ENST00000245414 LRRN4CLQ8ND94 238 aa11.47□□□□□ -0.57
IRF1-201ENST00000245414 CBX8Q9HC52 389 aa11.47□□□□□ -0.57
IRF1-201ENST00000245414 IBSPP21815 317 aaPredicted RBP11.47□□□□□ -0.57
IRF1-201ENST00000245414 LRRC8AQ8IWT6 810 aa11.47□□□□□ -0.57
IRF1-201ENST00000245414 C16orf71Q8IYS4 520 aaPredicted RBP11.47□□□□□ -0.57
IRF1-201ENST00000245414 TNMDQ9H2S6 317 aa11.47□□□□□ -0.57
IRF1-201ENST00000245414 RBM28Q9NW13 759 aaKnown RBP11.47□□□□□ -0.57
IRF1-201ENST00000245414 PPP6R1Q9UPN7 881 aa11.47□□□□□ -0.57
IRF1-201ENST00000245414 CCDC9Q9Y3X0 531 aaKnown RBP11.47□□□□□ -0.57
IRF1-201ENST00000245414 CCDC69A6NI79 296 aa11.46□□□□□ -0.57
IRF1-201ENST00000245414 URI1O94763 535 aaPredicted RBP11.46□□□□□ -0.57
IRF1-201ENST00000245414 USP8P40818 1118 aa11.46□□□□□ -0.57
IRF1-201ENST00000245414 SSR1P43307 286 aaKnown RBP11.46□□□□□ -0.57
IRF1-201ENST00000245414 TSGA10IPQ3SY00 556 aa11.46□□□□□ -0.57
IRF1-201ENST00000245414 TTC22Q5TAA0 569 aa11.46□□□□□ -0.57
IRF1-201ENST00000245414 ARFGAP3Q9NP61 516 aa11.46□□□□□ -0.57
IRF1-201ENST00000245414 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.46□□□□□ -0.57
IRF1-201ENST00000245414 NEBLO76041 1014 aa11.46□□□□□ -0.58
IRF1-201ENST00000245414 CWC27Q6UX04 472 aaKnown RBP11.46□□□□□ -0.58
IRF1-201ENST00000245414 PLEKHA4Q9H4M7 779 aa11.46□□□□□ -0.58
IRF1-201ENST00000245414 ABCC2Q92887 1545 aa11.46□□□□□ -0.58
IRF1-201ENST00000245414 PPP1R12AO14974 1030 aaPredicted RBP11.46□□□□□ -0.58
IRF1-201ENST00000245414 NRDCO43847 1150 aa11.46□□□□□ -0.58
IRF1-201ENST00000245414 ZNF165P49910 485 aa11.46□□□□□ -0.58
IRF1-201ENST00000245414 FOXR1Q6PIV2 292 aa11.46□□□□□ -0.58
IRF1-201ENST00000245414 SLC24A3Q9HC58 644 aa11.46□□□□□ -0.58
IRF1-201ENST00000245414 ANO2Q9NQ90 1003 aa11.46□□□□□ -0.58
IRF1-201ENST00000245414 CROCC2H7BZ55 1655 aa11.45□□□□□ -0.58
IRF1-201ENST00000245414 MPHOSPH10O00566 681 aaKnown RBP11.45□□□□□ -0.58
IRF1-201ENST00000245414 NEMFO60524 1076 aa11.45□□□□□ -0.58
IRF1-201ENST00000245414 SMC2O95347 1197 aa11.45□□□□□ -0.58
IRF1-201ENST00000245414 SDSP20132 328 aa11.45□□□□□ -0.58
IRF1-201ENST00000245414 PLEKHM2Q8IWE5 1019 aa11.45□□□□□ -0.58
IRF1-201ENST00000245414 C9orf84Q5VXU9 1444 aa11.45□□□□□ -0.58
IRF1-201ENST00000245414 VPS37CA5D8V6 355 aaPredicted RBP11.45□□□□□ -0.58
IRF1-201ENST00000245414 BECN2A8MW95 431 aa11.45□□□□□ -0.58
IRF1-201ENST00000245414 GBP6Q6ZN66 633 aa11.45□□□□□ -0.58
IRF1-201ENST00000245414 CFAP53Q96M91 514 aa11.45□□□□□ -0.58
IRF1-201ENST00000245414 CEP89Q96ST8 783 aa11.45□□□□□ -0.58
IRF1-201ENST00000245414 RAI14Q9P0K7 980 aa11.45□□□□□ -0.58
IRF1-201ENST00000245414 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.45□□□□□ -0.58
IRF1-201ENST00000245414 SCP2P22307 547 aa11.44□□□□□ -0.58
IRF1-201ENST00000245414 MCM6Q14566 821 aa11.44□□□□□ -0.58
IRF1-201ENST00000245414 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.44□□□□□ -0.58
IRF1-201ENST00000245414 SUGP1Q8IWZ8 645 aaKnown RBP11.44□□□□□ -0.58
IRF1-201ENST00000245414 ZSCAN22P10073 491 aaPredicted RBP11.44□□□□□ -0.58
IRF1-201ENST00000245414 GSCP56915 257 aaPredicted RBP11.44□□□□□ -0.58
IRF1-201ENST00000245414 SWT1Q5T5J6 900 aaKnown RBP11.44□□□□□ -0.58
IRF1-201ENST00000245414 NYAP1Q6ZVC0 841 aa11.44□□□□□ -0.58
IRF1-201ENST00000245414 INTS4Q96HW7 963 aaKnown RBP11.44□□□□□ -0.58
IRF1-201ENST00000245414 FUCA2Q9BTY2 467 aa11.44□□□□□ -0.58
IRF1-201ENST00000245414 EPC1Q9H2F5 836 aa11.44□□□□□ -0.58
IRF1-201ENST00000245414 ORC3Q9UBD5 711 aaPredicted RBP11.44□□□□□ -0.58
IRF1-201ENST00000245414 DNAI1Q9UI46 699 aa11.44□□□□□ -0.58
IRF1-201ENST00000245414 USP16Q9Y5T5 823 aa11.44□□□□□ -0.58
IRF1-201ENST00000245414 DNM1Q05193 864 aaKnown RBP11.44□□□□□ -0.58
IRF1-201ENST00000245414 REXO1L1PQ8IX06 675 aa11.44□□□□□ -0.58
IRF1-201ENST00000245414 DNAJC25Q9H1X3 360 aa11.44□□□□□ -0.58
IRF1-201ENST00000245414 DTNBO60941 627 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms